Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 1.5e-127 459.5 228 100.0
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.8e-53 213.4 227 55.1
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 1.8e-53 213.4 227 54.6
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 5.5e-34 148.7 218 43.1
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 8.0e-33 144.8 222 42.8
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.0e-27 127.9 216 40.7
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.5e-26 124.0 222 40.5
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 3.3e-26 122.9 110 62.7
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 7.3e-26 121.7 216 40.3
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 7.3e-26 121.7 221 40.7
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.6e-25 120.6 226 38.5
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 1.6e-25 120.6 226 38.5
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.6e-25 120.6 213 36.2
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 4.7e-25 119.0 212 38.7
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 4.7e-25 119.0 216 39.8
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 4.7e-25 119.0 214 39.3
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 2.3e-24 116.7 230 34.8
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 6.8e-24 115.2 220 37.7
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 6.8e-24 115.2 212 36.3
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 8.9e-24 114.8 225 38.7
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 1.5e-23 114.0 220 35.5
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.0e-23 113.6 210 38.6
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 2.6e-23 113.2 214 36.9
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 4.4e-23 112.5 218 36.7
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 4.4e-23 112.5 199 38.7
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 9.8e-23 111.3 199 38.2
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.3e-22 110.9 201 39.3
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 2.2e-22 110.2 199 37.7
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 2.9e-22 109.8 215 35.3
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 2.9e-22 109.8 277 34.3
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 3.7e-22 109.4 216 38.0
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 3.7e-22 109.4 215 36.3
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 3.7e-22 109.4 216 37.5
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 4.9e-22 109.0 192 39.6
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 4.9e-22 109.0 215 35.8
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 6.4e-22 108.6 218 36.7
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 6.4e-22 108.6 219 35.6
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 6.4e-22 108.6 203 37.9
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 8.3e-22 108.2 212 36.3
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 8.3e-22 108.2 203 36.0
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 8.3e-22 108.2 221 38.9
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 1.1e-21 107.8 202 37.6
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 1.4e-21 107.5 220 40.5
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 1.4e-21 107.5 202 35.1
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.4e-21 106.7 212 34.9
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 4.1e-21 105.9 200 37.0
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 4.1e-21 105.9 196 36.7
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 7.0e-21 105.1 209 35.4
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.6e-20 104.0 216 35.6
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 4.6e-20 102.4 216 37.0
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 4.6e-20 102.4 218 33.9
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 1.3e-19 100.9 218 33.5
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 1.7e-19 100.5 112 51.8
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 2.3e-19 100.1 226 33.6
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 3.0e-19 99.8 199 34.2
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 3.0e-19 99.8 212 34.4
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 5.0e-19 99.0 218 34.4
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 5.0e-19 99.0 219 36.5
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 5.0e-19 99.0 218 34.9
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 6.6e-19 98.6 218 33.5
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 8.6e-19 98.2 199 33.2
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 8.6e-19 98.2 111 50.5
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 1.1e-18 97.8 112 50.9
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 1.5e-18 97.4 115 53.0
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 1.5e-18 97.4 210 34.3
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 1.5e-18 97.4 206 33.5
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 2.5e-18 96.7 194 32.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 4.3e-18 95.9 214 36.0
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 9.5e-18 94.7 218 33.5
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 2.1e-17 93.6 213 35.2
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 4.7e-17 92.4 213 36.2
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 6.2e-17 92.0 213 35.7
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 1.8e-16 90.5 213 34.3
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 1.8e-16 90.5 213 34.3
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 1.8e-16 90.5 213 34.3
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 4.0e-16 89.4 111 50.5
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 8.9e-16 88.2 221 33.0
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 9.8e-15 84.7 197 32.5
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 6.4e-14 82.0 229 30.1
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 8.3e-14 81.6 200 29.0
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.1e-13 81.3 221 30.3
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.1e-13 81.3 213 32.4
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 1.9e-13 80.5 247 31.2
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 7.1e-13 78.6 212 34.0
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 1.2e-12 77.8 225 29.3
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 3.5e-12 76.3 208 30.3
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 6.0e-12 75.5 76 52.6
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 6.0e-12 75.5 206 29.1
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 1.0e-11 74.7 211 29.9
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.7e-11 73.9 201 28.4
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 4.3e-10 69.3 193 30.6
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 1.2e-09 67.8 215 26.5
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.4e-08 64.3 79 45.6


User provided reference genes

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