Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 2.3e-129 465.7 252 100.0
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 5.0e-60 235.3 254 58.3
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 6.5e-60 235.0 254 57.1
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.5e-56 223.8 253 56.1
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 2.9e-44 183.0 232 51.3
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 6.5e-44 181.8 239 51.0
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 2.5e-43 179.9 200 52.5
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.5e-43 178.7 247 46.2
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 5.5e-43 178.7 247 46.2
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 2.1e-42 176.8 197 53.3
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 4.7e-42 175.6 228 50.0
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 6.1e-42 175.3 234 53.0
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 6.8e-41 171.8 199 51.8
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 8.8e-41 171.4 199 52.8
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 1.5e-40 170.6 230 48.3
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.0e-40 170.2 234 53.0
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 2.0e-40 170.2 200 50.5
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 4.4e-40 169.1 219 49.3
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 5.7e-40 168.7 203 57.6
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 7.5e-40 168.3 250 46.0
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 9.8e-40 167.9 152 58.6
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 1.3e-39 167.5 248 45.2
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 1.7e-39 167.2 202 54.0
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 2.8e-39 166.4 146 61.6
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 4.8e-39 165.6 224 46.4
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 6.3e-39 165.2 222 45.0
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 8.3e-39 164.9 243 44.4
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 1.1e-38 164.5 209 47.8
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.1e-38 164.5 229 47.6
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 1.1e-38 164.5 231 45.5
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 1.1e-38 164.5 230 45.7
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.1e-38 164.5 226 44.2
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.8e-38 163.7 237 46.0
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 3.1e-38 162.9 195 48.2
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 4.1e-38 162.5 248 46.8
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 5.4e-38 162.2 201 51.7
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 7.0e-38 161.8 198 50.0
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 2.0e-37 160.2 148 58.1
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 3.5e-37 159.5 200 49.5
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 3.5e-37 159.5 239 46.4
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.5e-37 159.5 144 59.7
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 4.5e-37 159.1 212 47.2
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 5.9e-37 158.7 216 43.1
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 5.9e-37 158.7 221 46.6
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 7.7e-37 158.3 216 43.5
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 1.0e-36 157.9 141 60.3
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.3e-36 157.5 203 45.8
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.3e-36 157.5 147 56.5
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.3e-36 157.5 199 49.2
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.7e-36 157.1 203 45.8
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.7e-36 157.1 228 44.7
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 2.9e-36 156.4 242 45.5
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 5.0e-36 155.6 139 59.0
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 8.6e-36 154.8 200 47.5
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 1.1e-35 154.5 232 46.1
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 1.1e-35 154.5 202 49.5
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.1e-35 154.5 195 47.7
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.1e-35 154.5 199 46.2
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.5e-35 154.1 199 49.7
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 2.5e-35 153.3 142 57.0
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.5e-35 153.3 141 58.9
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 3.3e-35 152.9 226 45.1
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.2e-35 152.5 203 46.3
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 4.2e-35 152.5 199 48.7
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 1.2e-34 151.0 231 46.3
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.6e-34 150.6 217 51.6
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.1e-34 150.2 202 50.0
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 2.8e-34 149.8 198 47.5
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 4.7e-34 149.1 141 54.6
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 1.4e-33 147.5 241 42.7
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.4e-33 147.5 149 53.0
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.8e-33 147.1 202 46.0
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 1.8e-33 147.1 195 50.3
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.0e-33 146.4 230 42.2
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 4.0e-33 146.0 243 43.2
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 8.9e-33 144.8 149 52.3
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 1.2e-32 144.4 198 49.0
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.2e-32 144.4 202 46.5
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 2.0e-32 143.7 227 47.1
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 2.6e-32 143.3 203 48.8
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 4.4e-32 142.5 223 45.7
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 5.7e-32 142.1 200 46.0
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 9.8e-32 141.4 197 46.7
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 1.3e-31 141.0 238 45.8
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 2.2e-31 140.2 190 47.9
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 2.2e-31 140.2 207 45.9
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 6.3e-31 138.7 213 44.1
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 6.3e-31 138.7 213 44.1
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 8.3e-31 138.3 204 47.1
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 1.4e-30 137.5 231 42.0
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 1.4e-30 137.5 231 42.0
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 4.1e-30 136.0 151 51.7
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 4.1e-30 136.0 247 40.9
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 5.4e-30 135.6 156 50.6
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 7.0e-30 135.2 144 47.2
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 9.2e-30 134.8 140 53.6
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 9.2e-30 134.8 151 51.7
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.2e-29 134.4 241 43.2
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 7.8e-29 131.7 207 40.6
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.9e-28 129.8 204 41.2
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 2.9e-28 129.8 138 47.1
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.9e-27 127.1 148 50.7
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 5.6e-27 125.6 138 50.0
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 6.1e-26 122.1 229 44.5
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 2.3e-25 120.2 181 42.0
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 9.8e-24 114.8 146 44.5
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 9.8e-24 114.8 75 69.3
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.4e-22 110.9 214 39.3
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 1.4e-17 94.4 135 39.3
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 1.2e-16 91.3 240 36.2
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 2.6e-16 90.1 144 38.9
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 1.1e-14 84.7 195 36.4
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 5.4e-14 82.4 72 56.9
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 9.2e-14 81.6 111 45.9
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 8.6e-12 75.1 96 44.8
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 2.6e-08 63.5 43 74.4
Hund02819 Selenicereus undatus HOM05D000190 ORTHO05D000113 5.8e-08 62.4 91 58.2
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 4.1e-06 56.2 93 44.1


User provided reference genes

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