Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 3.1e-78 295.0 147 100.0
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 3.0e-41 172.2 175 56.6
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 2.5e-35 152.5 176 55.7
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.2e-26 123.6 168 47.6
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.7e-20 103.2 175 42.3
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 1.5e-19 100.1 169 41.4
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.5e-19 100.1 157 41.4
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 2.5e-19 99.4 160 40.6
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 4.2e-19 98.6 177 41.2
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 2.8e-18 95.9 167 40.7
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 3.6e-18 95.5 167 39.5
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 4.7e-18 95.1 173 39.3
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 1.4e-17 93.6 172 41.3
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 4.0e-17 92.0 171 40.4
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 4.0e-17 92.0 176 39.2
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 5.2e-17 91.7 174 41.4
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 6.8e-17 91.3 98 52.0
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 6.8e-17 91.3 172 39.5
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 8.9e-17 90.9 168 40.5
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 8.9e-17 90.9 174 39.1
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.2e-16 90.5 157 40.1
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 4.4e-16 88.6 166 39.2
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 4.4e-16 88.6 176 38.1
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 4.4e-16 88.6 203 35.0
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 9.8e-16 87.4 175 38.3
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 9.8e-16 87.4 173 37.0
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.7e-15 86.7 175 36.0
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 1.7e-15 86.7 170 35.3
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 2.2e-15 86.3 167 37.7
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 1.1e-14 84.0 169 38.5
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.4e-14 83.6 155 38.1
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 1.4e-14 83.6 138 38.4
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 1.4e-14 83.6 179 41.9
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 1.4e-14 83.6 167 37.1
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 1.4e-14 83.6 144 40.3
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 1.8e-14 83.2 146 38.4
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 1.8e-14 83.2 180 36.7
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 3.1e-14 82.4 135 39.3
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 3.1e-14 82.4 134 38.1
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 3.1e-14 82.4 175 37.1
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 3.1e-14 82.4 107 48.6
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 7.0e-14 81.3 128 39.8
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 7.0e-14 81.3 179 39.7
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 9.2e-14 80.9 172 37.2
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.2e-13 80.5 178 34.8
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 2.0e-13 79.7 160 36.2
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 4.5e-13 78.6 109 45.0
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 4.5e-13 78.6 96 50.0
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 5.9e-13 78.2 149 37.6
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 5.9e-13 78.2 119 42.0
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 7.8e-13 77.8 146 37.0
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 1.0e-12 77.4 75 53.3
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 1.3e-12 77.0 160 36.2
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 1.3e-12 77.0 174 34.5
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 1.7e-12 76.6 179 34.1
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 1.7e-12 76.6 175 36.6
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 1.7e-12 76.6 148 36.5
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 1.7e-12 76.6 166 36.7
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 2.3e-12 76.3 171 35.1
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 2.3e-12 76.3 107 43.0
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 2.3e-12 76.3 130 40.8
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 2.9e-12 75.9 161 35.4
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 2.9e-12 75.9 164 34.8
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 2.9e-12 75.9 126 40.5
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 2.9e-12 75.9 162 34.0
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 5.0e-12 75.1 147 38.1
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 1.1e-11 73.9 127 40.2
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 1.1e-11 73.9 164 34.1
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 1.5e-11 73.6 162 34.0
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 1.5e-11 73.6 140 37.9
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 1.9e-11 73.2 107 43.0
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 2.5e-11 72.8 144 36.8
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 3.3e-11 72.4 174 33.9
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 3.3e-11 72.4 162 34.0
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 3.3e-11 72.4 174 33.9
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 3.3e-11 72.4 100 46.0
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 4.3e-11 72.0 105 41.9
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 5.6e-11 71.6 176 34.7
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 5.6e-11 71.6 174 33.3
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 5.6e-11 71.6 174 33.3
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 5.6e-11 71.6 174 33.3
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 5.6e-11 71.6 159 34.0
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 5.6e-11 71.6 105 47.6
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 9.5e-11 70.9 150 34.7
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 1.2e-10 70.5 99 45.5
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 2.8e-10 69.3 141 37.6
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 3.6e-10 68.9 94 43.6
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 3.6e-10 68.9 106 41.5
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 3.6e-10 68.9 100 46.0
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.4e-09 67.0 97 44.3
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 2.3e-09 66.2 96 41.7
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 4.0e-09 65.5 98 39.8
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 5.2e-09 65.1 154 33.8
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 8.9e-09 64.3 49 63.3
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 2.0e-08 63.2 104 42.3
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 2.0e-08 63.2 100 44.0
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 2.6e-08 62.8 191 29.8
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 2.6e-08 62.8 44 65.9
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 3.4e-08 62.4 59 50.8
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 4.4e-08 62.0 53 58.5
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 5.8e-08 61.6 46 63.0
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 5.8e-08 61.6 104 37.5
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 1.7e-07 60.1 84 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 7.0e-06 54.7 30 73.3


User provided reference genes

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