Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 5.1e-116 421.0 201 100.0
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 1.4e-73 280.0 207 67.6
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 1.9e-70 269.6 196 68.4
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 2.5e-70 269.2 207 65.2
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 9.5e-46 187.6 164 55.5
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 2.8e-45 186.0 189 49.7
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 3.6e-45 185.7 206 47.6
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 8.3e-42 174.5 155 52.3
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 4.1e-41 172.2 200 46.5
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.6e-40 170.2 205 45.9
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 2.1e-40 169.9 209 47.8
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 6.0e-40 168.3 174 48.3
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 6.0e-40 168.3 205 45.9
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 2.3e-39 166.4 205 46.3
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 6.6e-39 164.9 198 44.4
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 2.5e-38 162.9 197 43.7
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 3.3e-38 162.5 160 50.0
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 5.6e-38 161.8 151 52.3
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 5.6e-38 161.8 193 44.6
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 7.3e-38 161.4 198 43.9
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 1.2e-37 160.6 151 52.3
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 2.8e-37 159.5 207 40.6
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 3.6e-37 159.1 189 45.0
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 1.1e-36 157.5 200 44.5
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.4e-36 157.1 205 42.4
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 1.4e-36 157.1 203 45.3
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 4.0e-36 155.6 172 47.1
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 5.2e-36 155.2 199 44.2
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 6.8e-36 154.8 190 44.2
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 1.2e-35 154.1 191 42.9
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 1.2e-35 154.1 203 44.3
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 2.6e-35 152.9 199 43.7
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 3.4e-35 152.5 190 43.7
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 3.4e-35 152.5 181 43.6
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 3.4e-35 152.5 205 41.5
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 4.4e-35 152.1 137 57.7
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 7.5e-35 151.4 192 43.2
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 7.5e-35 151.4 199 43.2
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 7.5e-35 151.4 155 48.4
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 9.9e-35 151.0 143 51.7
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 4.9e-34 148.7 159 48.4
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 1.1e-33 147.5 192 43.8
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 1.1e-33 147.5 195 41.5
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 2.4e-33 146.4 185 43.2
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 3.2e-33 146.0 135 54.8
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 3.2e-33 146.0 200 40.5
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 4.1e-33 145.6 155 48.4
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 5.4e-33 145.2 159 44.7
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 7.1e-33 144.8 137 54.7
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 7.1e-33 144.8 195 42.1
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 7.1e-33 144.8 195 42.1
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 7.1e-33 144.8 195 42.1
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 9.2e-33 144.4 149 47.7
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 1.6e-32 143.7 198 38.9
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 1.6e-32 143.7 187 43.9
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 3.5e-32 142.5 153 47.1
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 7.8e-32 141.4 206 40.8
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 1.3e-31 140.6 194 41.8
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 1.3e-31 140.6 156 44.9
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.3e-31 139.8 155 45.2
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 3.9e-31 139.0 144 50.0
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 8.6e-31 137.9 157 45.2
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 1.9e-30 136.7 157 43.3
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 1.9e-30 136.7 154 46.1
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 4.3e-30 135.6 138 48.6
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 4.3e-30 135.6 138 48.6
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 4.3e-30 135.6 138 48.6
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 4.3e-30 135.6 137 48.2
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 1.2e-29 134.0 138 48.6
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 1.6e-29 133.7 154 44.2
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 1.6e-29 133.7 191 39.3
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 3.6e-29 132.5 138 47.8
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 3.6e-29 132.5 107 56.1
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 4.7e-29 132.1 130 48.5
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 4.7e-29 132.1 135 46.7
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 8.1e-29 131.3 112 53.6
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 1.8e-28 130.2 160 41.9
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 3.1e-28 129.4 147 47.6
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 9.9e-27 124.4 133 46.6
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 9.9e-27 124.4 145 42.8
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 1.3e-26 124.0 212 38.7
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 1.3e-26 124.0 202 38.1
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 1.3e-26 124.0 144 45.1
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 1.4e-25 120.6 104 51.9
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 5.4e-25 118.6 108 51.9
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 5.4e-25 118.6 131 44.3
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.6e-24 117.1 152 36.8
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 2.7e-24 116.3 111 47.7
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 6.0e-24 115.2 181 36.5
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 1.0e-23 114.4 98 51.0
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 1.7e-23 113.6 146 41.1
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.9e-22 110.2 141 39.7
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 5.6e-22 108.6 100 48.0
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 5.6e-22 108.6 190 38.9
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 9.6e-22 107.8 125 43.2
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 1.6e-21 107.1 128 43.8
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 2.8e-21 106.3 133 42.1
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.8e-20 103.6 132 40.9
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 3.1e-20 102.8 154 39.6
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 2.6e-19 99.8 143 40.6
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 4.6e-16 89.0 132 40.2
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 3.3e-14 82.8 74 52.7
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 4.3e-14 82.4 215 31.6
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 1.1e-12 77.8 106 35.8
AUR62025057 Chenopodium quinoa HOM05D000087 ORTHO05D008722 2.6e-11 73.2 57 63.2
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.2e-10 70.1 61 50.8
AUR62025055 Chenopodium quinoa HOM05D002989 ORTHO05D008722 8.4e-10 68.2 57 61.4
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 1.9e-09 67.0 79 43.0
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 7.1e-09 65.1 60 40.0
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 2.7e-08 63.2 87 39.1
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 5.1e-07 58.9 61 41.0


User provided reference genes

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