Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050050 Amaranthus hybridus HOM05D005044 ORTHO05D060978 3.1e-44 182.6 204 100.0
EL10Ac5g10465 Beta vulgaris HOM05D005044 ORTHO05D006799 2.6e-19 99.8 94 67.0
VMungo1383G1961 Vigna mungo HOM05D005044 ORTHO05D006799 3.3e-14 82.8 90 57.8
Phvul.001G156000 Phaseolus vulgaris HOM05D005044 ORTHO05D006799 1.1e-12 77.8 91 54.9
Medtr7g096040 Medicago truncatula HOM05D005044 ORTHO05D006799 4.1e-12 75.9 93 54.8
AUR62032265 Chenopodium quinoa HOM05D005044 ORTHO05D006799 7.0e-12 75.1 59 71.2
AUR62011952 Chenopodium quinoa HOM05D005044 ORTHO05D006799 9.1e-12 74.7 59 71.2
Glyma.19G160700 Glycine max HOM05D005044 ORTHO05D006799 1.6e-11 73.9 94 53.2
Lj1g0021498 Lotus japonicus HOM05D005044 ORTHO05D006799 1.6e-11 73.9 92 53.3
Psat3g061080 Pisum sativum HOM05D005044 ORTHO05D006799 2.0e-11 73.6 89 56.2
TPR.G19106 Trifolium pratense HOM05D005044 ORTHO05D006799 3.5e-11 72.8 88 55.7
THA.LOC104804692 Tarenaya hassleriana HOM05D005044 ORTHO05D006799 4.5e-11 72.4 98 51.0
Prupe.8G232900 Prunus persica HOM05D005044 ORTHO05D006799 5.9e-11 72.0 97 54.6
TWI12G0479 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 5.9e-11 72.0 103 47.6
MD10G1193500 Malus domestica HOM05D005044 ORTHO05D006799 7.7e-11 71.6 97 54.6
Glyma.03G158300 Glycine max HOM05D005044 ORTHO05D006799 1.0e-10 71.2 89 51.7
Eucgr.K03317 Eucalyptus grandis HOM05D005044 ORTHO05D006799 2.2e-10 70.1 96 50.0
Cpa.g.sc52.102 Carica papaya HOM05D005044 ORTHO05D006799 2.9e-10 69.7 101 50.5
QL12p042617 Quercus lobata HOM05D005044 ORTHO05D006799 2.9e-10 69.7 100 52.0
Sabra02G0036900 Salix brachista HOM05D005044 ORTHO05D006799 5.0e-10 68.9 100 49.0
Potri.002G045900 Populus trichocarpa HOM05D005044 ORTHO05D006799 6.5e-10 68.6 99 48.5
RcHm_v2.0_Chr6g0289651 Rosa chinensis HOM05D005044 ORTHO05D006799 8.5e-10 68.2 96 53.1
Sabra05G0166600 Salix brachista HOM05D005044 ORTHO05D006799 1.1e-09 67.8 96 50.0
TWI75G1122 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 1.5e-09 67.4 103 47.6
Lj1A57T46 Lonicera japonica HOM05D005044 ORTHO05D006799 3.2e-09 66.2 94 50.0
FAN15G1010 Fragaria x ananassa HOM05D005044 ORTHO05D006799 5.5e-09 65.5 97 52.6
Sc05g0001060 Simmondsia chinensis HOM05D005044 ORTHO05D006799 5.5e-09 65.5 96 51.0
FAN20G1248 Fragaria x ananassa HOM05D005044 ORTHO05D006799 7.2e-09 65.1 97 53.6
CSS0043243 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D006799 9.4e-09 64.7 93 49.5
Ciclev10019527m.g Citrus clementina HOM05D005044 ORTHO05D006799 9.4e-09 64.7 95 51.6
Dinv34561 Davidia involucrata HOM05D005044 ORTHO05D006799 9.4e-09 64.7 88 54.5
Eucgr.K03316 Eucalyptus grandis HOM05D005044 ORTHO05D006799 9.4e-09 64.7 97 48.5
CiPaw.04G181200 Carya illinoinensis HOM05D005044 ORTHO05D006799 1.2e-08 64.3 98 48.0
Sp5g07850 Schrenkiella parvula HOM05D005044 ORTHO05D006799 1.2e-08 64.3 96 51.0
FvH4_2g22590 Fragaria vesca HOM05D005044 ORTHO05D006799 1.6e-08 63.9 97 53.6
FAN24G0661 Fragaria x ananassa HOM05D005044 ORTHO05D006799 1.6e-08 63.9 97 53.6
Hund09563 Selenicereus undatus HOM05D005044 ORTHO05D006799 1.6e-08 63.9 101 52.5
AT3G54610 Arabidopsis thaliana HOM05D005044 ORTHO05D006799 2.7e-08 63.2 96 49.0
FAN27G2477 Fragaria x ananassa HOM05D005044 ORTHO05D006799 3.6e-08 62.8 97 52.6
HanXRQChr10g0281481 Helianthus annuus HOM05D005044 ORTHO05D006799 4.7e-08 62.4 98 45.9
Manes.01G202300 Manihot esculenta HOM05D005044 ORTHO05D006799 4.7e-08 62.4 74 56.8
AL5G35690 Arabidopsis lyrata HOM05D005044 ORTHO05D006799 6.1e-08 62.0 96 47.9
MSTRG.17471 Avicennia marina HOM05D005044 ORTHO05D006799 6.1e-08 62.0 103 44.7
Ca_08641_v3 Cicer arietinum L. HOM05D005044 ORTHO05D006799 8.0e-08 61.6 89 49.4
vmacro14879 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 8.0e-08 61.6 89 51.7
Atru.chr5.1554 Acer truncatum HOM05D005044 ORTHO05D006799 1.0e-07 61.2 97 48.5
PGR044G0510 Punica granatum HOM05D005044 ORTHO05D006799 1.4e-07 60.8 97 44.3
Dinv22487 Davidia involucrata HOM05D005044 ORTHO05D006799 1.8e-07 60.5 88 47.7
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 2.3e-07 60.1 90 45.6
Carub.0005s2121 Capsella rubella HOM05D005044 ORTHO05D006799 2.3e-07 60.1 96 46.9
Lsat_1_v5_gn_9_8160 Lactuca sativa HOM05D005044 ORTHO05D006799 2.3e-07 60.1 93 46.2
Migut.N02179 Erythranthe guttata HOM05D005044 ORTHO05D006799 3.0e-07 59.7 97 45.4
Thhalv10010247m.g Eutrema salsugineum HOM05D005044 ORTHO05D006799 3.0e-07 59.7 96 47.9
Lalb_Chr25g0290121 Lupinus albus HOM05D005044 ORTHO05D006799 3.0e-07 59.7 95 48.4
Potri.005G217400 Populus trichocarpa HOM05D005044 ORTHO05D006799 3.0e-07 59.7 96 47.9
CARHR164510 Cardamine hirsuta HOM05D005044 ORTHO05D006799 4.0e-07 59.3 96 49.0
Rhsim13G0030500 Rhododendron simsii HOM05D005044 ORTHO05D006799 4.0e-07 59.3 90 51.1
CDE07G1918 Ceratophyllum demersum HOM05D005044 ORTHO05D006799 6.8e-07 58.5 100 49.0
Duzib133G0403 Durio zibethinus HOM05D005044 ORTHO05D006799 6.8e-07 58.5 95 48.4
Nitab4.5_0004093g0010 Nicotiana tabacum HOM05D005044 ORTHO05D006799 6.8e-07 58.5 92 45.7
SHI09971 Sapria himalayana HOM05D005044 ORTHO05D006799 6.8e-07 58.5 95 49.5
Sed0025057 Sechium edule HOM05D005044 ORTHO05D006799 8.8e-07 58.2 102 49.0
A04p05210 Brassica napus HOM05D005044 ORTHO05D006799 2.0e-06 57.0 91 48.4
Nitab4.5_0000393g0110 Nicotiana tabacum HOM05D005044 ORTHO05D006799 2.0e-06 57.0 92 45.7
unitig_22.g5955 Utricularia gibba HOM05D005044 ORTHO05D006799 3.4e-06 56.2 96 42.7
BcaB01g00175 Brassica carinata HOM05D005044 ORTHO05D006799 4.4e-06 55.8 91 50.5
Haze_24523 Corylus avellana HOM05D005044 ORTHO05D006799 4.4e-06 55.8 73 49.3
ClCG01G025700 Citrullus lanatus HOM05D005044 ORTHO05D006799 5.7e-06 55.5 106 41.5
MELO3C007015.2 Cucumis melo HOM05D005044 ORTHO05D006799 5.7e-06 55.5 106 41.5
Solyc10g045390.2 Solanum lycopersicum HOM05D005044 ORTHO05D006799 5.7e-06 55.5 96 44.8
SGA_v2.0_scaffold80G25918 Striga asiatica HOM05D005044 ORTHO05D006799 5.7e-06 55.5 96 43.8
Aa31sc64G50 Aethionema arabicum HOM05D005044 ORTHO05D006799 7.5e-06 55.1 96 47.9
CsaV3_6G052930 Cucumis sativus L. HOM05D005044 ORTHO05D006799 9.8e-06 54.7 106 39.6
ECA247G2181 Erigeron canadensis HOM05D005044 ORTHO05D006799 9.8e-06 54.7 95 43.2


User provided reference genes

Program Settings