Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g048350 Amaranthus hybridus HOM05D007106 ORTHO05D007770 5.4e-47 190.7 97 100.0
EL10Ac5g11028 Beta vulgaris HOM05D007106 ORTHO05D007770 4.0e-18 94.7 100 63.0
Hund02644 Selenicereus undatus HOM05D007106 ORTHO05D007770 1.2e-14 83.2 105 51.4
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 2.8e-11 72.0 93 46.2
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 8.2e-11 70.5 103 49.5
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 3.1e-10 68.6 97 44.3
Sed0016719 Sechium edule HOM05D007106 ORTHO05D007770 1.2e-09 66.6 93 44.1
FvH4_5g14840 Fragaria vesca HOM05D007106 ORTHO05D007770 1.5e-09 66.2 97 41.2
FAN18G2192 Fragaria x ananassa HOM05D007106 ORTHO05D007770 1.5e-09 66.2 97 41.2
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 2.0e-09 65.9 98 41.8
MELO3C001986.2 Cucumis melo HOM05D007106 ORTHO05D007770 2.6e-09 65.5 98 41.8
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 3.4e-09 65.1 93 44.1
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 3.4e-09 65.1 93 44.1
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 3.4e-09 65.1 98 42.9
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 4.5e-09 64.7 89 42.7
RcHm_v2.0_Chr7g0181551 Rosa chinensis HOM05D007106 ORTHO05D007770 4.5e-09 64.7 97 42.3
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 7.6e-09 63.9 100 38.0
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 1.0e-08 63.5 98 40.8
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 1.3e-08 63.2 97 42.3
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.2e-08 62.4 89 41.6
TWI15G1028 Tripterygium wilfordii HOM05D007106 ORTHO05D007770 6.5e-08 60.8 96 40.6
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 2.5e-07 58.9 95 38.9
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 3.2e-07 58.5 91 39.6
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 5.5e-07 57.8 83 43.4
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 7.2e-07 57.4 87 40.2
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 9.3e-07 57.0 95 35.8
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 9.3e-07 57.0 95 35.8
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 9.3e-07 57.0 93 36.6
Ciclev10022899m.g Citrus clementina HOM05D007106 ORTHO05D007770 1.2e-06 56.6 93 43.0
Aqoxy3G03422 Aquilegia oxysepala HOM05D007106 ORTHO05D007770 1.6e-06 56.2 90 38.9
HanXRQChr05g0155941 Helianthus annuus HOM05D007106 ORTHO05D007770 1.6e-06 56.2 90 38.9
MD12G1012400 Malus domestica HOM05D007691 ORTHO05D008758 1.6e-06 56.2 81 40.7
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 1.6e-06 56.2 97 39.2
Potri.015G062300 Populus trichocarpa HOM05D007106 ORTHO05D007770 1.6e-06 56.2 93 36.6
Cpa.g.sc423.1 Carica papaya HOM05D007106 ORTHO05D007770 2.1e-06 55.8 96 40.6
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 2.1e-06 55.8 78 42.3
MD14G1010200 Malus domestica HOM05D007691 ORTHO05D008758 2.1e-06 55.8 84 42.9
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 2.1e-06 55.8 103 41.7
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 2.1e-06 55.8 91 39.6
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 2.1e-06 55.8 86 40.7
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 2.7e-06 55.5 96 41.7
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 2.7e-06 55.5 98 37.8
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 3.6e-06 55.1 82 41.5
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 3.6e-06 55.1 83 41.0
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 3.6e-06 55.1 83 41.0
THA.LOC104812541 Tarenaya hassleriana HOM05D007106 ORTHO05D007770 3.6e-06 55.1 36 66.7
THA.LOC104821419 Tarenaya hassleriana HOM05D012999 ORTHO05D007770 3.6e-06 55.1 102 39.2
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 3.6e-06 55.1 93 38.7
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 4.6e-06 54.7 97 42.3
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 6.1e-06 54.3 75 41.3
TPR.G34787 Trifolium pratense HOM05D007691 ORTHO05D008758 6.1e-06 54.3 88 38.6
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 7.9e-06 53.9 95 34.7
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 7.9e-06 53.9 103 40.8


User provided reference genes

Program Settings