Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g048200 Amaranthus hybridus HOM05D004946 ORTHO05D006101 4.3e-177 624.8 373 100.0
AUR62008463 Chenopodium quinoa HOM05D004946 ORTHO05D006101 6.0e-86 322.0 318 57.9
AUR62021632 Chenopodium quinoa HOM05D004946 ORTHO05D006101 4.0e-82 309.3 318 56.3
AUR62038115 Chenopodium quinoa HOM05D004946 ORTHO05D006101 1.7e-80 303.9 312 56.1
Dinv15680 Davidia involucrata HOM05D004946 ORTHO05D006101 5.3e-66 255.8 402 46.3
EL10Ac5g11063 Beta vulgaris HOM05D004946 ORTHO05D006101 2.0e-65 253.8 243 62.6
Actinidia18931 Actinidia chinensis HOM05D004946 ORTHO05D006101 3.5e-62 243.0 400 45.8
MD14G1227000 Malus domestica HOM05D004946 ORTHO05D006101 1.5e-60 237.7 400 48.0
Sc12g0007670 Simmondsia chinensis HOM05D004946 ORTHO05D006101 1.8e-58 230.7 395 43.3
Atru.chr9.855 Acer truncatum HOM05D004946 ORTHO05D006101 2.9e-56 223.4 400 42.2
CSS0004173 Camellia sinensis var. sinensis HOM05D004946 ORTHO05D006101 9.3e-55 218.4 401 46.9
Hma1.2p1_2409F.1_g321510 Hydrangea macrophylla HOM05D004946 ORTHO05D006101 1.2e-54 218.0 432 39.6
Thecc.03G035700 Theobroma cacao HOM05D004946 ORTHO05D006101 1.5e-52 211.1 401 41.9
Haze_18683 Corylus avellana HOM05D004946 ORTHO05D006101 1.9e-52 210.7 402 41.0
Dinv28107 Davidia involucrata HOM05D004946 ORTHO05D006101 5.7e-52 209.1 399 40.9
Potri.012G056200 Populus trichocarpa HOM05D004946 ORTHO05D006101 5.7e-52 209.1 403 41.2
QL10p025417 Quercus lobata HOM05D004946 ORTHO05D006101 1.3e-51 208.0 404 42.6
Duzib084G0074 Durio zibethinus HOM05D004946 ORTHO05D006101 2.8e-51 206.8 395 41.5
CANSAT80G1182 Cannabis sativa HOM05D004946 ORTHO05D006101 3.1e-50 203.4 394 40.6
Gorai.006G060600 Gossypium raimondii HOM05D004946 ORTHO05D006101 6.9e-50 202.2 401 41.9
FAN18G2620 Fragaria x ananassa HOM05D004946 ORTHO05D006101 1.2e-49 201.4 401 41.1
FAN08G1246 Fragaria x ananassa HOM05D004946 ORTHO05D006101 1.5e-49 201.1 400 41.8
FvH4_5g12080 Fragaria vesca HOM05D004946 ORTHO05D006101 2.0e-49 200.7 401 41.1
Gohir.D09G049200 Gossypium hirsutum HOM05D004946 ORTHO05D006101 2.0e-49 200.7 401 41.6
TWI15G0834 Tripterygium wilfordii HOM05D004946 ORTHO05D006101 2.6e-49 200.3 422 39.8
Cfa019764 Carpinus fangiana HOM05D004946 ORTHO05D006101 3.4e-49 199.9 385 40.0
FAN18G3139 Fragaria x ananassa HOM05D004946 ORTHO05D006101 3.4e-49 199.9 401 41.1
Actinidia35090 Actinidia chinensis HOM05D004946 ORTHO05D006101 7.7e-49 198.7 331 43.5
MSTRG.11071 Avicennia marina HOM05D004946 ORTHO05D006101 7.7e-49 198.7 399 40.4
Prupe.5G221700 Prunus persica HOM05D004946 ORTHO05D006101 1.3e-48 198.0 398 39.9
FAN04G0770 Fragaria x ananassa HOM05D004946 ORTHO05D006101 1.7e-48 197.6 395 41.3
PGR044G1576 Punica granatum HOM05D004946 ORTHO05D006101 6.5e-48 195.7 401 43.4
ECA238G2506 Erigeron canadensis HOM05D004946 ORTHO05D006101 3.2e-47 193.4 389 40.6
Eucgr.K02226 Eucalyptus grandis HOM05D004946 ORTHO05D006101 7.2e-47 192.2 412 38.8
RcHm_v2.0_Chr7g0185491 Rosa chinensis HOM05D004946 ORTHO05D006101 2.7e-46 190.3 396 40.9
Gohir.D08G105600 Gossypium hirsutum HOM05D004946 ORTHO05D006101 4.6e-46 189.5 402 40.5
Cc04_g07080 Coffea canephora HOM05D004946 ORTHO05D006101 1.4e-45 188.0 391 40.4
FAN13G1851 Fragaria x ananassa HOM05D004946 ORTHO05D006101 3.0e-45 186.8 392 41.1
Oeu064714.1 Olea europaea HOM05D004946 ORTHO05D006101 3.9e-45 186.4 396 38.1
CsaV3_1G006630 Cucumis sativus L. HOM05D004946 ORTHO05D006101 1.1e-44 184.9 405 40.7
MELO3C002087.2 Cucumis melo HOM05D004946 ORTHO05D006101 1.5e-44 184.5 405 40.7
Nn4g23854 Nelumbo nucifera HOM05D004946 ORTHO05D006101 5.7e-44 182.6 401 40.4
Aqoxy3G00287 Aquilegia oxysepala HOM05D004946 ORTHO05D006101 7.4e-44 182.2 402 40.0
Nitab4.5_0012710g0020 Nicotiana tabacum HOM05D004946 ORTHO05D006101 7.4e-44 182.2 391 40.9
Nitab4.5_0000208g0330 Nicotiana tabacum HOM05D004946 ORTHO05D006101 1.7e-43 181.0 388 40.2
Ciclev10020493m.g Citrus clementina HOM05D004946 ORTHO05D006101 1.1e-42 178.3 402 39.1
CiPaw.16G086800 Carya illinoinensis HOM05D004946 ORTHO05D006101 1.8e-42 177.6 411 38.9
Lalb_Chr09g0331081 Lupinus albus HOM05D004946 ORTHO05D006101 2.4e-42 177.2 406 43.8
Sopen03g038310 Solanum pennellii HOM05D004946 ORTHO05D006101 2.4e-42 177.2 385 37.1
Hma1.2p1_0701F.1_g205890 Hydrangea macrophylla HOM05D004946 ORTHO05D006101 6.9e-42 175.6 327 40.1
PGSC0003DMG401005635 Solanum tuberosum HOM05D004946 ORTHO05D006101 9.1e-42 175.3 385 36.6
TAR629G2125 Trochodendron aralioides HOM05D004946 ORTHO05D006101 9.1e-42 175.3 336 40.2
Psat7g010600 Pisum sativum HOM05D004946 ORTHO05D006101 1.2e-41 174.9 408 38.0
arahy.Tifrunner.gnm1.ann1.G56NCJ Arachis hypogaea HOM05D004946 ORTHO05D006101 1.5e-41 174.5 397 40.1
arahy.Tifrunner.gnm1.ann1.N3S6I2 Arachis hypogaea HOM05D004946 ORTHO05D006101 3.4e-41 173.3 397 39.5
Oeu056801.1 Olea europaea HOM05D004946 ORTHO05D006101 3.4e-41 173.3 402 38.6
arahy.Tifrunner.gnm1.ann1.94ZJ0E Arachis hypogaea HOM05D004946 ORTHO05D006101 7.7e-41 172.2 393 39.7
Sp5g29040 Schrenkiella parvula HOM05D004946 ORTHO05D006101 2.2e-40 170.6 403 40.0
Medtr8g104260 Medicago truncatula HOM05D004946 ORTHO05D006101 5.0e-40 169.5 403 37.7
Glyma.10G040800 Glycine max HOM05D004946 ORTHO05D006101 1.1e-39 168.3 395 39.5
C06p33810 Brassica napus HOM05D004946 ORTHO05D006101 2.5e-39 167.2 403 38.7
vmacro16446 Vaccinium macrocarpon HOM05D004946 ORTHO05D006101 3.2e-39 166.8 411 38.9
BcaC08g45619 Brassica carinata HOM05D004946 ORTHO05D006101 4.2e-39 166.4 395 39.5
A07p29630 Brassica napus HOM05D004946 ORTHO05D006101 9.4e-39 165.2 404 39.1
COL.COLO4_11303 Corchorus olitorius HOM05D004946 ORTHO05D006101 9.4e-39 165.2 385 39.0
BolC6t38494H Brassica oleracea HOM05D004946 ORTHO05D006101 3.6e-38 163.3 403 38.5
CARHR066930 Cardamine hirsuta HOM05D004946 ORTHO05D006101 3.6e-38 163.3 404 38.9
TPR.G32702 Trifolium pratense HOM05D004946 ORTHO05D006101 3.6e-38 163.3 402 36.8
arahy.Tifrunner.gnm1.ann1.X2WJJP Arachis hypogaea HOM05D004946 ORTHO05D006101 7.9e-38 162.2 394 38.3
Migut.I00881 Erythranthe guttata HOM05D004946 ORTHO05D006101 1.0e-37 161.8 418 37.1
VMungo0720G2584 Vigna mungo HOM05D004946 ORTHO05D006101 1.0e-37 161.8 400 38.0
Peaxi162Scf00015g01034 Petunia axillaris HOM05D004946 ORTHO05D006101 3.9e-37 159.8 327 37.3
AT1G73840 Arabidopsis thaliana HOM05D004946 ORTHO05D006101 5.1e-37 159.5 406 38.7
Lalb_Chr05g0222491 Lupinus albus HOM05D004946 ORTHO05D006101 5.1e-37 159.5 398 39.7
HanXRQChr06g0184711 Helianthus annuus HOM05D004946 ORTHO05D006101 2.6e-36 157.1 386 40.9
PSO478G0599 Papaver somniferum HOM05D004946 ORTHO05D006101 2.6e-36 157.1 393 41.2
PSO017G0469 Papaver somniferum HOM05D004946 ORTHO05D006101 4.4e-36 156.4 396 39.6
AL2G33660 Arabidopsis lyrata HOM05D004946 ORTHO05D006101 7.4e-36 155.6 408 40.7
CAN.G1889.4 Capsicum annuum HOM05D004946 ORTHO05D006101 1.3e-35 154.8 383 37.1
Nn3g17855 Nelumbo nucifera HOM05D004946 ORTHO05D006101 1.7e-35 154.5 400 34.5
Nitab4.5_0000974g0090 Nicotiana tabacum HOM05D004946 ORTHO05D006101 1.7e-35 154.5 385 35.1
Ca_25442_v3 Cicer arietinum L. HOM05D004946 ORTHO05D006101 2.8e-35 153.7 388 37.9
Manes.01G011100 Manihot esculenta HOM05D004946 ORTHO05D006101 2.8e-35 153.7 399 36.6
Sed0008793 Sechium edule HOM05D004946 ORTHO05D006101 3.7e-35 153.3 308 41.6
Lj4g0022250 Lotus japonicus HOM05D004946 ORTHO05D006101 4.8e-35 152.9 406 37.2
Sabra12G0039900 Salix brachista HOM05D004946 ORTHO05D006101 4.8e-35 152.9 422 34.8
HPP92_004811 Vanilla planifolia HOM05D004946 ORTHO05D006101 4.8e-35 152.9 393 36.4
Gorai.004G113500 Gossypium raimondii HOM05D004946 ORTHO05D006101 6.3e-35 152.5 400 36.5
ClCG04G011130 Citrullus lanatus HOM05D004946 ORTHO05D006101 8.2e-35 152.1 423 38.1
BcaB03g15098 Brassica carinata HOM05D004946 ORTHO05D006101 1.4e-34 151.4 406 37.7
CDE02G4219 Ceratophyllum demersum HOM05D004946 ORTHO05D006101 1.4e-34 151.4 404 35.4
Rhsim12G0143100 Rhododendron simsii HOM05D004946 ORTHO05D006101 4.1e-34 149.8 418 33.7
Carub.0002s2060 Capsella rubella HOM05D004946 ORTHO05D006101 2.0e-33 147.5 411 39.2
Aa31LG4G4160 Aethionema arabicum HOM05D004946 ORTHO05D006101 2.6e-33 147.1 421 34.7
Thhalv10018702m.g Eutrema salsugineum HOM05D004946 ORTHO05D006101 4.5e-33 146.4 401 36.4
unitig_8.g3895 Utricularia gibba HOM05D004946 ORTHO05D006101 4.5e-33 146.4 376 35.6
BcaB03g15093 Brassica carinata HOM05D004946 ORTHO05D006101 1.0e-32 145.2 385 37.9
C06p47990 Brassica napus HOM05D004946 ORTHO05D006101 1.0e-32 145.2 385 37.9
Gohir.A08G095000 Gossypium hirsutum HOM05D004946 ORTHO05D006101 1.7e-32 144.4 314 38.9
SGA_v2.0_scaffold5G02571 Striga asiatica HOM05D004946 ORTHO05D006101 5.0e-32 142.9 407 34.4
Phvul.007G154000 Phaseolus vulgaris HOM05D004946 ORTHO05D006101 6.5e-32 142.5 429 34.7
BcaB03g15731 Brassica carinata HOM05D004946 ORTHO05D006101 8.5e-32 142.1 412 37.1
BraA07t30604Z Brassica rapa HOM05D004946 ORTHO05D006101 7.2e-31 139.0 406 37.9
BcaB03g15090 Brassica carinata HOM05D004946 ORTHO05D006101 1.6e-30 137.9 398 36.4
GSVIVG01008294001 Vitis vinifera HOM05D004946 ORTHO05D006101 8.0e-30 135.6 383 33.9
GSVIVG01008293001 Vitis vinifera HOM05D004946 ORTHO05D006101 1.0e-29 135.2 386 36.8
A07p39700 Brassica napus HOM05D004946 ORTHO05D006101 1.4e-29 134.8 399 36.3
BraA07t31519Z Brassica rapa HOM05D004946 ORTHO05D006101 3.0e-29 133.7 389 36.8
Gohir.A09G048000 Gossypium hirsutum HOM05D004946 ORTHO05D006101 5.2e-29 132.9 331 38.1
Nitab4.5_0009306g0010 Nicotiana tabacum HOM05D004946 ORTHO05D006101 2.6e-28 130.6 350 34.6
THA.LOC104812144 Tarenaya hassleriana HOM05D004946 ORTHO05D006101 3.3e-28 130.2 412 33.7
Lsat_1_v5_gn_2_12261 Lactuca sativa HOM05D004946 ORTHO05D006101 8.2e-27 125.6 379 33.5
ATR1125G052 Amborella trichopoda HOM05D004946 ORTHO05D006101 2.0e-25 120.9 391 35.0
DCAR_023206 Daucus carota HOM05D004946 ORTHO05D006101 2.6e-25 120.6 326 35.0
Peaxi162Scf00634g00318 Petunia axillaris HOM05D004946 ORTHO05D006101 3.5e-25 120.2 309 37.2
BcaB03g15096 Brassica carinata HOM05D004946 ORTHO05D006101 1.3e-24 118.2 312 37.5
Solyc03g119460.4 Solanum lycopersicum HOM05D004946 ORTHO05D006101 1.7e-24 117.9 373 31.9
HPP92_004808 Vanilla planifolia HOM05D004946 ORTHO05D006101 1.7e-24 117.9 314 36.9
Zm00001eb292700 Zea mays HOM05D004946 ORTHO05D006101 1.8e-21 107.8 389 32.1
Cpa.g.sc3.508 Carica papaya HOM05D004946 ORTHO05D006101 4.0e-21 106.7 156 46.2
Glyma.08G041600 Glycine max HOM05D004946 ORTHO05D006101 9.7e-20 102.1 348 38.2
Gohir.D05G109701 Gossypium hirsutum HOM05D004946 ORTHO05D006101 3.7e-19 100.1 200 41.0
Gohir.D11G132850 Gossypium hirsutum HOM05D004946 ORTHO05D006101 3.7e-19 100.1 200 41.0
Ca_25456_v3 Cicer arietinum L. HOM05D004946 ORTHO05D006101 8.2e-19 99.0 300 34.7
CDE06G1062 Ceratophyllum demersum HOM05D004946 ORTHO05D006101 4.1e-18 96.7 270 35.2
Gohir.D08G202000 Gossypium hirsutum HOM05D004946 ORTHO05D006101 1.2e-17 95.1 159 44.7
Ca_15108_v3 Cicer arietinum L. HOM05D004946 ORTHO05D006101 2.0e-17 94.4 158 42.4
SGA_v2.0_scaffold37G14831 Striga asiatica HOM05D004946 ORTHO05D006101 1.7e-16 91.3 361 33.2
CANSAT80G2575 Cannabis sativa HOM05D004946 ORTHO05D006101 2.9e-16 90.5 109 55.0
Glyma.05G234300 Glycine max HOM05D004946 ORTHO05D006101 1.2e-14 85.1 332 35.5
BcaNung06927 Brassica carinata HOM05D004946 ORTHO05D006101 5.2e-13 79.7 157 42.7
Gohir.A08G094762 Gossypium hirsutum HOM05D004946 ORTHO05D006101 5.2e-13 79.7 59 72.9
BolC6t39834H Brassica oleracea HOM05D004946 ORTHO05D006101 1.3e-11 75.1 196 38.3
FvH4_3g36821 Fragaria vesca HOM05D004946 ORTHO05D006101 2.2e-11 74.3 54 77.8
Pp3c14_13370 Physcomitrium patens HOM05D004266 ORTHO05D005151 2.4e-10 70.9 407 29.5
Os05g0513300 Oryza sativa ssp. japonica HOM05D004946 ORTHO05D006101 7.0e-10 69.3 277 28.9
Mapoly0070s0034 Marchantia polymorpha HOM05D004266 ORTHO05D005151 2.7e-09 67.4 80 52.5
CBR_g33965 Chara braunii HOM05D004266 ORTHO05D005151 4.5e-09 66.6 74 54.1
AUR62038113 Chenopodium quinoa HOM05D004946 ORTHO05D006101 1.7e-08 64.7 60 58.3
DCAR_015143 Daucus carota HOM05D004946 ORTHO05D006101 1.7e-08 64.7 328 27.4
SEGI_28516 Sequoiadendron giganteum HOM05D004946 ORTHO05D006101 2.5e-07 60.8 66 51.5
AagrBONN_evm.TU.Sc2ySwM_228.143 Anthoceros agrestis HOM05D004266 ORTHO05D005151 9.5e-07 58.9 164 34.8
Prupe.8G045900 Prunus persica HOM05D004266 ORTHO05D005151 2.1e-06 57.8 398 26.9
ECA247G0282 Erigeron canadensis HOM05D004266 ORTHO05D000002 3.6e-06 57.0 396 26.8
MBI02_g11379_MAGBIO Magnolia biondii HOM05D004946 ORTHO05D006101 8.0e-06 55.8 182 31.9


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