Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 0.0e+00 1392.1 692 100.0
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 0.0e+00 1075.8 649 82.4
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 0.0e+00 1075.1 649 82.4
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 4.5e-297 1024.2 604 83.4
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 5.6e-287 990.7 649 77.0
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 4.1e-282 974.5 651 74.2
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.9e-279 965.7 648 74.8
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 9.5e-279 963.4 648 73.1
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 2.1e-278 962.2 648 72.7
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 8.1e-278 960.3 650 73.5
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 3.1e-277 958.4 648 74.2
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.5e-276 956.1 648 74.1
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.0e-276 955.7 650 73.8
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 4.4e-276 954.5 660 73.0
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.1e-274 949.9 662 72.4
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 3.2e-274 948.3 648 72.4
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 9.2e-274 946.8 660 71.5
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 9.2e-274 946.8 657 72.3
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 9.2e-274 946.8 643 72.5
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 2.7e-273 945.3 647 72.6
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 7.8e-273 943.7 629 73.8
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 1.0e-272 943.3 667 70.9
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 1.0e-272 943.3 648 72.2
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 7.3e-271 937.2 629 72.5
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 9.5e-271 936.8 642 71.2
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 1.6e-270 936.0 651 71.9
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.1e-270 935.6 649 71.5
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.4e-269 932.9 649 70.4
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 1.8e-269 932.6 660 69.8
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 2.3e-269 932.2 640 72.8
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 2.3e-269 932.2 649 71.5
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 4.0e-269 931.4 663 71.8
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 6.8e-269 930.6 649 70.1
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 5.8e-268 927.5 633 73.1
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.8e-268 927.5 650 70.5
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 9.9e-268 926.8 632 72.6
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 1.3e-267 926.4 630 72.7
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 1.7e-267 926.0 601 75.7
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 3.7e-267 924.9 631 72.1
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 3.7e-267 924.9 648 71.6
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 3.7e-267 924.9 649 70.1
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 4.9e-267 924.5 645 71.0
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 4.9e-267 924.5 649 71.0
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 8.4e-267 923.7 641 71.1
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 8.4e-267 923.7 655 70.7
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 1.9e-266 922.5 649 70.0
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 4.1e-266 921.4 649 69.8
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 5.4e-266 921.0 630 71.7
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 1.2e-265 919.8 655 69.8
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 2.1e-265 919.1 642 69.9
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 7.8e-265 917.1 641 71.8
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 1.0e-264 916.8 644 70.7
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.7e-264 916.0 643 69.8
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 2.3e-264 915.6 645 70.5
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 5.1e-264 914.4 631 72.3
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 1.1e-263 913.3 633 72.2
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 1.1e-263 913.3 631 71.0
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 1.9e-263 912.5 650 69.1
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 5.6e-263 911.0 629 71.5
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 7.3e-263 910.6 632 71.7
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 1.6e-262 909.4 629 70.9
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 2.8e-262 908.7 614 71.8
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 2.8e-262 908.7 630 71.1
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 6.2e-262 907.5 630 70.8
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 6.2e-262 907.5 629 70.9
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 1.1e-261 906.7 602 74.1
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 1.4e-261 906.4 601 74.4
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 1.5e-260 902.9 632 69.6
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 5.8e-260 901.0 644 70.0
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 7.6e-260 900.6 658 68.2
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 4.9e-259 897.9 629 69.2
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 4.2e-258 894.8 643 68.6
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 7.1e-258 894.0 586 74.2
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 2.7e-257 892.1 636 70.0
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 1.3e-256 889.8 605 72.4
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 2.5e-255 885.6 649 68.0
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 3.3e-255 885.2 601 73.5
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 1.2e-252 876.7 633 68.7
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 2.0e-252 875.9 633 68.2
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 2.0e-252 875.9 603 70.1
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 4.4e-252 874.8 634 68.8
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 1.3e-251 873.2 632 67.6
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 1.6e-249 866.3 604 70.0
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 2.1e-249 865.9 633 67.8
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 2.1e-249 865.9 629 68.2
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 2.1e-249 865.9 630 68.4
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 3.5e-249 865.1 604 71.5
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 1.5e-247 859.8 634 67.5
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 1.3e-246 856.7 654 67.1
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 2.1e-246 855.9 605 69.9
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 4.2e-242 841.6 629 67.1
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 5.6e-239 831.2 719 59.7
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 4.8e-238 828.2 515 77.9
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 3.7e-222 775.4 653 60.9
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 1.6e-217 760.0 766 53.7
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 4.3e-215 751.9 681 58.1
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 5.7e-215 751.5 515 71.5
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 7.4e-215 751.1 644 60.9
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 1.4e-208 730.3 649 60.2
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 6.7e-208 728.0 745 50.2
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 1.1e-207 727.2 845 46.7
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 7.4e-207 724.5 743 49.9
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 3.5e-204 715.7 810 48.3
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 1.8e-200 703.4 638 58.3
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 1.8e-197 693.3 597 60.1
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 9.4e-194 681.0 453 74.8
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 6.3e-190 668.3 452 72.3
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 5.9e-188 661.8 636 53.3
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 5.8e-167 592.0 522 59.4
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.3e-166 590.9 425 70.6
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 1.5e-159 567.4 547 54.3
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.7e-140 503.4 409 62.6
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 1.2e-119 434.9 309 68.9
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 6.0e-116 422.5 379 59.9
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 5.5e-109 399.4 263 74.5
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 2.5e-106 390.6 322 60.9
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.3e-94 351.7 237 73.0
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 1.8e-88 331.3 215 76.3
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 7.7e-87 325.9 340 51.2
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 1.0e-83 315.5 617 37.1
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 5.9e-63 246.5 144 79.2
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 1.4e-40 172.2 431 29.7
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.4e-40 171.4 120 67.5
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.4e-35 154.8 139 58.3
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.1e-12 78.6 151 34.4
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 4.2e-08 64.3 49 61.2
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 2.1e-07 62.0 37 81.1


User provided reference genes

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