Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g046900 Amaranthus hybridus HOM05D003971 ORTHO05D004762 4.0e-92 341.7 203 100.0
EL10Ac5g11286 Beta vulgaris HOM05D003971 ORTHO05D004762 1.7e-26 123.6 204 46.6
Hund02509 Selenicereus undatus HOM05D003971 ORTHO05D004762 1.4e-25 120.6 203 44.3
Hund10040 Selenicereus undatus HOM05D003971 ORTHO05D004762 5.1e-23 112.1 204 42.2
Dinv13723 Davidia involucrata HOM05D003971 ORTHO05D004762 4.1e-20 102.4 163 43.6
Sc22g0003380 Simmondsia chinensis HOM05D003971 ORTHO05D004762 4.5e-19 99.0 196 36.7
Dinv23223 Davidia involucrata HOM05D003971 ORTHO05D004762 1.3e-18 97.4 215 37.7
AUR62041703 Chenopodium quinoa HOM05D003971 ORTHO05D004762 1.7e-18 97.1 183 43.2
Sc04g0000200 Simmondsia chinensis HOM05D003971 ORTHO05D004762 1.9e-17 93.6 153 42.5
Cfa018707 Carpinus fangiana HOM05D003971 ORTHO05D004762 7.2e-17 91.7 201 42.3
AUR62009537 Chenopodium quinoa HOM05D003971 ORTHO05D004762 1.2e-16 90.9 130 50.0
Phvul.009G161300 Phaseolus vulgaris HOM05D003971 ORTHO05D004762 7.9e-16 88.2 165 40.0
Cpa.g.sc13.168 Carica papaya HOM05D003971 ORTHO05D004762 1.4e-15 87.4 161 40.4
Lalb_Chr11g0069181 Lupinus albus HOM05D003971 ORTHO05D004762 1.8e-15 87.0 152 40.1
VMungo1309G0830 Vigna mungo HOM05D003971 ORTHO05D004762 6.7e-15 85.1 162 39.5
Rhsim08G0197300 Rhododendron simsii HOM05D003971 ORTHO05D004762 8.8e-15 84.7 167 39.5
GSVIVG01008647001 Vitis vinifera HOM05D003971 ORTHO05D004762 1.5e-14 84.0 154 39.6
Glyma.06G163900 Glycine max HOM05D003971 ORTHO05D004762 3.3e-14 82.8 165 38.2
TAR622G0096 Trochodendron aralioides HOM05D003971 ORTHO05D004762 4.3e-14 82.4 209 36.8
HanXRQChr05g0155401 Helianthus annuus HOM05D003971 ORTHO05D004762 5.7e-14 82.0 157 38.2
Aqoxy1G00170 Aquilegia oxysepala HOM05D003971 ORTHO05D004762 9.7e-14 81.3 161 40.4
Ciclev10031176m.g Citrus clementina HOM05D003971 ORTHO05D004762 1.3e-13 80.9 161 39.1
Lj9C486T6 Lonicera japonica HOM05D003971 ORTHO05D004762 1.7e-13 80.5 219 33.3
MD14G1147500 Malus domestica HOM05D003971 ORTHO05D004762 1.7e-13 80.5 159 37.1
CANSAT56G1634 Cannabis sativa HOM05D003971 ORTHO05D004762 2.8e-13 79.7 194 33.5
arahy.Tifrunner.gnm1.ann1.9UH1TF Arachis hypogaea HOM05D003971 ORTHO05D004762 8.2e-13 78.2 160 38.1
QL10p000509 Quercus lobata HOM05D003971 ORTHO05D004762 8.2e-13 78.2 163 38.0
MD06G1130900 Malus domestica HOM05D003971 ORTHO05D004762 1.1e-12 77.8 210 35.2
Duzib084G0567 Durio zibethinus HOM05D003971 ORTHO05D004762 4.1e-12 75.9 156 35.9
PSO384G2792 Papaver somniferum HOM05D003971 ORTHO05D004762 5.3e-12 75.5 207 33.8
Thecc.03G140300 Theobroma cacao HOM05D003971 ORTHO05D004762 6.9e-12 75.1 156 35.3
PSO339G4968 Papaver somniferum HOM05D003971 ORTHO05D004762 1.5e-11 73.9 210 34.8
Gorai.003G116700 Gossypium raimondii HOM05D003971 ORTHO05D004762 2.6e-11 73.2 161 38.5
Gohir.A03G056200 Gossypium hirsutum HOM05D003971 ORTHO05D004762 4.5e-11 72.4 161 38.5
SGA_v2.0_scaffold74G24722 Striga asiatica HOM05D003971 ORTHO05D004762 4.5e-11 72.4 172 35.5
CsaV3_1G009920 Cucumis sativus L. HOM05D003971 ORTHO05D004762 5.9e-11 72.0 160 37.5
FvH4_5g09480 Fragaria vesca HOM05D003971 ORTHO05D004762 5.9e-11 72.0 162 37.0
FAN18G1571 Fragaria x ananassa HOM05D003971 ORTHO05D004762 5.9e-11 72.0 162 37.0
MELO3C002386.2 Cucumis melo HOM05D003971 ORTHO05D004762 7.7e-11 71.6 161 38.5
Gohir.D03G110400 Gossypium hirsutum HOM05D003971 ORTHO05D004762 7.7e-11 71.6 159 38.4
Lsat_1_v5_gn_5_10121 Lactuca sativa HOM05D003971 ORTHO05D004762 1.0e-10 71.2 182 34.6
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 1.3e-10 70.9 173 34.7
RcHm_v2.0_Chr7g0188721 Rosa chinensis HOM05D003971 ORTHO05D004762 1.7e-10 70.5 159 34.6
CSS0040569 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 3.8e-10 69.3 210 29.0
Nn4g22021 Nelumbo nucifera HOM05D003971 ORTHO05D004762 3.8e-10 69.3 204 32.8
Lj1g0015188 Lotus japonicus HOM05D003971 ORTHO05D004762 6.5e-10 68.6 159 37.1
Haze_07098 Corylus avellana HOM05D003971 ORTHO05D004762 8.5e-10 68.2 189 39.2
SalBow7G2108 Salvia bowleyana HOM05D003971 ORTHO05D004762 8.5e-10 68.2 162 41.4
ClCG03G004040 Citrullus lanatus HOM05D003971 ORTHO05D004762 1.4e-09 67.4 161 36.6
Glyma.04G201300 Glycine max HOM05D003971 ORTHO05D004762 1.4e-09 67.4 103 42.7
Prupe.5G142100 Prunus persica HOM05D003971 ORTHO05D004762 2.5e-09 66.6 151 38.4
Migut.I00618 Erythranthe guttata HOM05D003971 ORTHO05D004762 9.4e-09 64.7 191 34.6
arahy.Tifrunner.gnm1.ann1.86AC6C Arachis hypogaea HOM05D003971 ORTHO05D004762 1.2e-08 64.3 183 33.3
Psat5g055040 Pisum sativum HOM05D003971 ORTHO05D004762 1.6e-08 63.9 164 36.0
Potri.012G108100 Populus trichocarpa HOM05D003971 ORTHO05D004762 2.1e-08 63.5 125 40.0
FAN13G1049 Fragaria x ananassa HOM05D003971 ORTHO05D004762 3.6e-08 62.8 162 34.6
Medtr3g098600 Medicago truncatula HOM05D003971 ORTHO05D004762 4.7e-08 62.4 154 35.1
Oeu061253.1 Olea europaea HOM05D003971 ORTHO05D004762 6.1e-08 62.0 198 32.3
Peaxi162Scf01168g00013 Petunia axillaris HOM05D003971 ORTHO05D004762 7.9e-08 61.6 207 30.4
Sed0008211 Sechium edule HOM05D003971 ORTHO05D004762 1.4e-07 60.8 155 36.1
Eucgr.K00065 Eucalyptus grandis HOM05D003971 ORTHO05D004762 2.3e-07 60.1 96 42.7
Potri.015G106300 Populus trichocarpa HOM05D003971 ORTHO05D004762 2.3e-07 60.1 115 40.0
Solyc12g042200.2 Solanum lycopersicum HOM05D003971 ORTHO05D004762 5.1e-07 58.9 202 27.7
Atru.chr6.1916 Acer truncatum HOM05D003971 ORTHO05D004762 1.1e-06 57.8 160 35.0
Cc04_g05880 Coffea canephora HOM05D003971 ORTHO05D004762 1.5e-06 57.4 148 31.8
Nitab4.5_0008403g0010 Nicotiana tabacum HOM05D003971 ORTHO05D004762 2.0e-06 57.0 248 27.4
Peaxi162Scf00314g00638 Petunia axillaris HOM05D003971 ORTHO05D004762 2.0e-06 57.0 150 31.3
Sopen12g021240 Solanum pennellii HOM05D003971 ORTHO05D004762 2.6e-06 56.6 202 29.7
MSTRG.22849 Avicennia marina HOM05D003971 ORTHO05D004762 4.4e-06 55.8 250 28.4
Sabra15G0126400 Salix brachista HOM05D003971 ORTHO05D004762 5.7e-06 55.5 170 41.8
FAN04G0277 Fragaria x ananassa HOM05D003971 ORTHO05D004762 9.7e-06 54.7 162 34.0


User provided reference genes

Program Settings