Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 2.9e-131 472.2 304 100.0
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 1.8e-101 373.2 211 88.6
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 6.6e-99 364.8 211 87.2
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 3.3e-98 362.5 311 74.6
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.2e-97 360.5 209 86.1
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 8.0e-97 357.8 209 85.2
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.4e-96 357.1 209 85.2
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 1.2e-95 354.0 207 84.1
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.2e-95 354.0 208 84.1
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 2.6e-95 352.8 207 85.0
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 2.6e-95 352.8 207 85.0
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 3.4e-95 352.4 211 84.4
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 3.4e-95 352.4 211 83.9
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 4.4e-95 352.1 209 84.2
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 4.4e-95 352.1 211 83.4
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 4.4e-95 352.1 207 84.5
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 5.8e-95 351.7 209 83.7
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 5.8e-95 351.7 209 83.3
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 7.5e-95 351.3 211 83.4
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 9.8e-95 350.9 209 84.2
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 9.8e-95 350.9 211 83.4
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 1.3e-94 350.5 211 83.4
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 1.3e-94 350.5 211 82.9
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.3e-94 350.5 211 82.9
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 1.7e-94 350.1 211 82.9
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 2.2e-94 349.7 211 82.5
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 2.9e-94 349.4 211 82.9
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 2.9e-94 349.4 211 82.9
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 2.9e-94 349.4 209 82.8
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 3.7e-94 349.0 211 82.5
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 3.7e-94 349.0 211 81.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 6.4e-94 348.2 207 83.6
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.1e-93 347.4 211 82.5
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.9e-93 346.7 211 81.5
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 2.4e-93 346.3 211 81.0
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 3.2e-93 345.9 207 80.7
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 3.2e-93 345.9 207 82.6
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 3.2e-93 345.9 209 82.3
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 3.2e-93 345.9 211 81.0
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 5.4e-93 345.1 207 82.1
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 5.4e-93 345.1 210 82.4
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 9.2e-93 344.4 211 81.5
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 1.2e-92 344.0 207 82.6
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 1.2e-92 344.0 209 82.3
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 1.6e-92 343.6 211 81.0
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.0e-92 343.2 213 81.2
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 2.7e-92 342.8 210 81.9
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 2.7e-92 342.8 211 80.6
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 3.5e-92 342.4 209 82.3
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 3.5e-92 342.4 211 80.6
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 4.6e-92 342.0 207 82.1
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 6.0e-92 341.7 211 80.6
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 6.0e-92 341.7 211 80.1
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 6.0e-92 341.7 211 80.6
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 6.0e-92 341.7 207 81.6
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 7.8e-92 341.3 207 81.6
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 7.8e-92 341.3 207 81.2
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.0e-91 340.9 207 81.6
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.3e-91 340.5 207 81.6
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 1.3e-91 340.5 207 83.1
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 1.3e-91 340.5 209 81.8
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.7e-91 340.1 207 79.7
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.7e-91 340.1 207 80.2
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.7e-91 340.1 207 79.7
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 3.0e-91 339.3 207 80.7
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 3.0e-91 339.3 211 80.1
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 3.0e-91 339.3 207 81.2
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 3.0e-91 339.3 207 79.7
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 3.9e-91 339.0 207 82.1
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.9e-91 339.0 207 79.2
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 5.0e-91 338.6 209 80.9
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 8.6e-91 337.8 207 82.1
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 1.5e-90 337.0 230 74.8
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.9e-90 336.7 207 80.7
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 1.9e-90 336.7 207 80.7
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.9e-90 336.7 207 82.1
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 1.9e-90 336.7 207 80.7
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 1.9e-90 336.7 207 81.6
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 1.9e-90 336.7 207 80.7
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 1.9e-90 336.7 207 80.7
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 1.9e-90 336.7 210 79.5
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 2.5e-90 336.3 207 82.1
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 4.3e-90 335.5 207 80.7
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 4.3e-90 335.5 212 78.3
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 5.6e-90 335.1 207 81.6
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 5.6e-90 335.1 207 78.7
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.2e-89 334.0 212 77.8
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.6e-89 333.6 207 79.7
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 6.2e-89 331.6 210 78.1
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 1.1e-88 330.9 215 77.7
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 6.8e-88 328.2 209 78.5
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 6.4e-86 321.6 207 80.2
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 5.4e-85 318.5 207 74.4
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 1.3e-83 313.9 202 75.7
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 3.0e-83 312.8 205 76.1
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 3.0e-83 312.8 208 73.6
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.9e-83 312.4 199 79.4
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 1.1e-80 304.3 209 73.2
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 6.4e-78 295.0 207 73.9
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 6.4e-78 295.0 209 71.3
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 3.2e-77 292.7 210 69.5
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 7.8e-76 288.1 205 69.3
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.9e-75 285.8 209 66.5
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 3.9e-75 285.8 207 72.5
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 3.3e-74 282.7 211 71.1
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 4.3e-74 282.3 207 67.1
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 2.4e-72 276.6 209 66.5
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 7.3e-66 255.0 204 62.7
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.9e-54 216.5 219 57.1
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 4.8e-49 199.1 135 75.6
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 6.2e-49 198.7 210 55.2
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 1.3e-43 181.0 208 50.0
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 7.4e-42 175.3 95 91.6
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 6.7e-35 152.1 91 81.3
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.2e-28 131.3 83 68.7
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 8.0e-12 75.5 44 75.0
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 7.7e-07 58.9 62 56.5
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 1.0e-06 58.5 129 32.6
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 1.7e-06 57.8 31 77.4


User provided reference genes

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