Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 8.4e-128 461.1 380 100.0
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 8.8e-77 291.6 396 71.5
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 8.8e-77 291.6 402 68.9
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 8.0e-62 241.9 376 55.1
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 1.2e-60 238.0 389 68.4
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 1.2e-60 238.0 376 55.3
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 1.7e-59 234.2 378 56.3
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 2.9e-59 233.4 376 63.8
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 2.9e-59 233.4 378 53.4
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 6.4e-59 232.3 376 41.0
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 1.4e-58 231.1 326 60.1
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 2.4e-58 230.3 379 57.5
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.4e-58 230.3 379 61.5
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 3.2e-58 229.9 377 58.9
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 9.2e-58 228.4 379 64.6
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 9.2e-58 228.4 378 51.1
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 4.6e-57 226.1 377 56.8
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 7.8e-57 225.3 377 60.2
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 1.0e-56 224.9 380 55.5
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 2.3e-56 223.8 379 58.3
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 5.0e-56 222.6 382 53.7
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 1.1e-55 221.5 400 62.5
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 1.5e-55 221.1 379 48.5
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 2.5e-55 220.3 377 59.4
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 3.3e-55 219.9 376 54.5
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 3.3e-55 219.9 380 59.2
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 4.3e-55 219.5 381 57.0
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 4.3e-55 219.5 381 57.0
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 5.6e-55 219.2 376 53.2
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 7.3e-55 218.8 381 55.1
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 3.6e-54 216.5 386 53.4
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 3.6e-54 216.5 376 57.4
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 3.6e-54 216.5 383 60.8
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 6.2e-54 215.7 380 61.1
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 8.0e-54 215.3 376 50.8
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 1.1e-53 214.9 383 58.7
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 4.0e-53 213.0 380 49.5
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 5.2e-53 212.6 377 61.0
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 5.2e-53 212.6 378 57.4
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 6.8e-53 212.2 379 57.3
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 1.2e-52 211.5 378 57.9
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 2.0e-52 210.7 379 49.9
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.4e-52 209.9 384 54.4
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 4.4e-52 209.5 379 60.4
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 4.4e-52 209.5 379 44.3
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 6.4e-51 205.7 378 46.3
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 6.4e-51 205.7 380 54.2
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 8.3e-51 205.3 380 56.3
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 1.1e-50 204.9 384 58.6
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 1.4e-50 204.5 378 44.4
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 4.1e-50 203.0 377 40.1
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 4.1e-50 203.0 378 59.3
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 5.4e-50 202.6 377 54.4
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 7.0e-50 202.2 382 52.6
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 7.0e-50 202.2 378 59.5
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 9.2e-50 201.8 376 46.8
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.1e-49 200.7 378 60.1
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 4.6e-49 199.5 381 49.3
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 4.6e-49 199.5 380 47.4
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 6.0e-49 199.1 386 59.6
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 7.8e-49 198.7 385 57.9
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 1.0e-48 198.4 378 55.3
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 1.3e-48 198.0 385 58.7
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 1.3e-48 198.0 378 46.0
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 8.6e-48 195.3 378 46.6
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 8.6e-48 195.3 380 50.0
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 8.6e-48 195.3 392 51.8
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.5e-47 194.5 378 50.3
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 1.9e-47 194.1 377 47.5
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.9e-47 194.1 378 50.8
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 4.3e-47 193.0 380 47.4
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 5.6e-47 192.6 379 39.8
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 5.6e-47 192.6 379 38.5
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 1.6e-46 191.0 377 56.5
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 2.8e-46 190.3 379 38.3
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 3.6e-46 189.9 377 44.6
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 3.6e-46 189.9 377 44.6
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 8.1e-46 188.7 378 47.6
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 1.4e-45 188.0 378 51.3
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 1.4e-45 188.0 376 48.4
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 4.0e-45 186.4 176 57.4
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 8.9e-45 185.3 376 46.5
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 1.3e-43 181.4 378 53.7
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 1.1e-42 178.3 394 52.5
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 5.4e-42 176.0 383 52.5
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 1.7e-40 171.0 382 51.3
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 6.6e-40 169.1 377 46.4
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 1.6e-38 164.5 285 73.0
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 1.8e-37 161.0 153 56.2
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 2.4e-37 160.6 388 50.3
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 1.2e-36 158.3 163 52.8
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 1.5e-36 157.9 376 41.2
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 2.2e-35 154.1 363 52.3
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 1.4e-34 151.4 142 54.9
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 9.2e-34 148.7 282 63.1
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 1.0e-32 145.2 152 51.3
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 2.8e-30 137.1 214 39.3
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 4.4e-28 129.8 129 51.9
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 8.4e-27 125.6 177 41.8
SalBow5G4198 Salvia bowleyana HOM05D006566 ORTHO05D004366 6.0e-25 119.4 128 47.7
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 6.6e-24 115.9 210 35.7
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 1.6e-22 111.3 277 47.7
arahy.Tifrunner.gnm1.ann1.JH7UH9 Arachis hypogaea HOM05D006566 ORTHO05D004366 4.8e-22 109.8 119 45.4
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 8.1e-22 109.0 170 40.0
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 1.1e-21 108.6 403 35.2
Ciclev10023573m.g Citrus clementina HOM05D006566 ORTHO05D004366 1.1e-21 108.6 156 42.9
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 2.4e-21 107.5 285 50.9
Lj5P120T28 Lonicera japonica HOM05D006566 ORTHO05D004366 2.0e-20 104.4 92 67.4
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 8.4e-19 99.0 158 40.5
Peaxi162Scf00496g00038 Petunia axillaris HOM05D006566 ORTHO05D004366 6.0e-17 92.8 98 48.0
Nn2g10835 Nelumbo nucifera HOM05D006566 ORTHO05D004366 7.4e-15 85.9 78 64.1
arahy.Tifrunner.gnm1.ann1.SD125V Arachis hypogaea HOM05D006566 ORTHO05D004366 1.3e-14 85.1 73 50.7
CDE06G1032 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 3.7e-14 83.6 93 59.1
Lj5A120T53 Lonicera japonica HOM05D006566 ORTHO05D004366 4.8e-14 83.2 96 44.8
Nn8g38961 Nelumbo nucifera HOM05D006566 ORTHO05D004366 2.4e-13 80.9 76 60.5
arahy.Tifrunner.gnm1.ann1.USZI6Q Arachis hypogaea HOM05D006566 ORTHO05D004366 6.9e-13 79.3 88 44.3
arahy.Tifrunner.gnm1.ann1.P21766 Arachis hypogaea HOM05D008215 ORTHO05D004366 6.0e-09 66.2 110 36.4
arahy.Tifrunner.gnm1.ann1.N3K4CS Arachis hypogaea HOM05D008215 ORTHO05D004366 5.7e-07 59.7 97 35.1
arahy.Tifrunner.gnm1.ann1.YEU6LJ Arachis hypogaea HOM05D006566 ORTHO05D004366 5.7e-07 59.7 73 43.8
arahy.Tifrunner.gnm1.ann1.P43TQX Arachis hypogaea HOM05D006566 ORTHO05D004366 7.4e-07 59.3 40 62.5
arahy.Tifrunner.gnm1.ann1.38ZYM9 Arachis hypogaea HOM05D008215 ORTHO05D004366 2.1e-06 57.8 85 40.0


User provided reference genes

Program Settings