Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 2.1e-100 369.0 181 100.0
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 1.7e-41 173.3 113 77.0
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 4.4e-34 148.7 114 65.8
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 7.5e-34 147.9 113 62.8
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 7.5e-34 147.9 114 64.0
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 1.3e-33 147.1 114 64.9
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 1.7e-33 146.7 114 63.2
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 2.2e-33 146.4 114 64.0
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 2.2e-33 146.4 114 62.3
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 3.7e-33 145.6 114 64.9
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 3.7e-33 145.6 114 64.9
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 4.9e-33 145.2 114 64.0
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 4.9e-33 145.2 114 64.0
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 6.4e-33 144.8 114 64.0
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 8.3e-33 144.4 114 63.2
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 4.1e-32 142.1 114 62.3
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 1.6e-31 140.2 114 61.4
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 3.5e-31 139.0 115 60.0
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 6.0e-31 138.3 113 61.9
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 1.0e-30 137.5 114 58.8
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.0e-30 137.5 114 58.8
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 1.3e-30 137.1 113 62.8
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 3.0e-30 136.0 114 59.6
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 3.9e-30 135.6 114 57.9
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 5.0e-30 135.2 114 57.9
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 5.0e-30 135.2 114 59.6
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 6.6e-30 134.8 112 58.0
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 2.5e-29 132.9 114 57.9
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 5.6e-29 131.7 116 57.8
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 1.2e-28 130.6 113 57.5
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 1.2e-28 130.6 116 56.9
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 2.1e-28 129.8 117 57.3
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 3.6e-28 129.0 112 58.0
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 8.0e-28 127.9 114 57.9
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 1.8e-27 126.7 117 53.8
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 2.3e-27 126.3 117 53.8
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 3.1e-27 125.9 117 53.0
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 3.1e-27 125.9 117 53.8
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 3.1e-27 125.9 117 53.8
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 6.8e-27 124.8 117 52.1
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 6.8e-27 124.8 117 53.0
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 8.9e-27 124.4 117 53.0
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 2.0e-26 123.2 117 52.1
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 2.0e-26 123.2 116 55.2
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 4.9e-25 118.6 123 49.6
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 6.4e-25 118.2 117 49.6
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 1.1e-24 117.5 135 48.1
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 3.2e-24 115.9 114 51.8
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.2e-23 114.0 175 41.7
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 6.0e-23 111.7 114 50.9
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 8.6e-22 107.8 116 48.3
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 1.9e-21 106.7 96 57.3
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 2.1e-20 103.2 164 39.0
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 8.1e-20 101.3 103 52.4
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 1.5e-18 97.1 123 45.5
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 7.5e-18 94.7 112 46.4
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 1.3e-17 94.0 114 45.6
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 1.1e-16 90.9 112 45.5
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 5.4e-16 88.6 150 38.0
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 9.2e-16 87.8 68 66.2
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 2.7e-15 86.3 68 60.3
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 2.7e-15 86.3 70 58.6
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 6.0e-15 85.1 115 40.0
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 1.0e-14 84.3 42 88.1
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 1.0e-14 84.3 119 42.0
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 1.7e-14 83.6 70 60.0
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 4.7e-12 75.5 67 50.7
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 4.7e-12 75.5 144 34.0
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 4.7e-12 75.5 48 70.8
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 1.8e-11 73.6 49 71.4
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 3.1e-11 72.8 42 73.8
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 9.9e-10 67.8 42 69.0
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 1.3e-09 67.4 54 57.4
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 3.8e-09 65.9 60 51.7
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 6.4e-09 65.1 42 66.7
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 1.1e-08 64.3 77 48.1
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 1.4e-08 63.9 42 66.7
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 3.2e-08 62.8 54 57.4
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 5.4e-08 62.0 48 64.6
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 1.2e-07 60.8 50 56.0
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 1.2e-07 60.8 39 61.5
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 4.6e-07 58.9 42 61.9
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 6.0e-07 58.5 42 57.1
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 7.8e-07 58.2 44 59.1
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 1.0e-06 57.8 42 59.5
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 8.7e-06 54.7 33 72.7
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 8.7e-06 54.7 45 55.6


User provided reference genes

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