Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 2.2e-235 818.5 409 100.0
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 4.4e-167 591.7 395 76.5
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.7e-166 589.7 433 67.2
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 6.4e-166 587.8 435 69.2
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 1.1e-165 587.0 432 67.1
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 2.7e-164 582.4 431 69.4
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 3.5e-164 582.0 441 67.6
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 3.5e-164 582.0 439 68.3
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 7.8e-164 580.9 435 69.4
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 1.7e-163 579.7 437 65.4
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.7e-163 579.7 440 67.0
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 1.5e-162 576.6 433 68.4
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.6e-161 573.2 433 69.3
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 3.6e-161 572.0 436 67.9
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 3.6e-161 572.0 438 67.6
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 4.8e-161 571.6 438 67.4
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 6.2e-161 571.2 434 67.5
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 8.1e-161 570.9 432 68.8
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.1e-160 570.5 435 68.7
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.1e-160 570.5 429 68.3
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 1.1e-160 570.5 431 67.7
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 1.4e-160 570.1 427 68.9
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 2.4e-160 569.3 431 67.5
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.4e-160 569.3 433 69.1
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 3.1e-160 568.9 433 69.1
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.1e-160 568.9 431 65.0
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 5.3e-160 568.2 416 68.8
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 5.3e-160 568.2 431 66.4
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 5.3e-160 568.2 437 67.0
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 6.9e-160 567.8 440 65.7
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 6.9e-160 567.8 432 64.4
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 2.6e-159 565.8 433 65.6
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 4.5e-159 565.1 444 64.9
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 5.8e-159 564.7 431 68.2
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 7.6e-159 564.3 428 65.4
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 7.6e-159 564.3 433 68.6
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 7.6e-159 564.3 435 67.1
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 2.9e-158 562.4 417 68.1
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 3.8e-158 562.0 436 67.7
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 4.9e-158 561.6 437 65.9
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 5.4e-157 558.1 427 63.9
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 1.6e-156 556.6 442 64.0
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 4.6e-156 555.1 436 64.4
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 1.0e-155 553.9 431 65.0
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 2.3e-155 552.7 434 66.1
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 8.7e-155 550.8 455 64.4
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 1.1e-154 550.4 434 63.6
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.5e-154 550.1 432 63.2
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 1.9e-154 549.7 438 64.2
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 2.5e-154 549.3 438 63.9
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 7.4e-154 547.7 343 77.6
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 2.1e-153 546.2 433 63.3
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 2.8e-153 545.8 439 63.6
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 1.1e-152 543.9 349 77.1
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 2.6e-151 539.3 425 60.9
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 2.6e-151 539.3 429 64.8
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 4.5e-151 538.5 432 64.1
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 4.5e-151 538.5 353 70.5
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.3e-150 537.0 435 63.2
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 2.9e-150 535.8 439 63.3
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 8.4e-150 534.3 424 62.3
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 1.4e-149 533.5 423 63.8
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 3.2e-149 532.3 413 62.5
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 7.1e-149 531.2 429 62.7
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 1.2e-148 530.4 432 62.7
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 1.6e-148 530.0 441 63.0
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 4.6e-148 528.5 424 59.2
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.0e-147 527.3 425 60.0
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.3e-147 526.9 329 76.0
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 2.3e-147 526.2 424 62.5
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 6.7e-147 524.6 424 59.0
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 8.7e-147 524.2 433 59.6
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 1.1e-146 523.9 419 60.4
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 1.9e-146 523.1 413 61.7
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 3.3e-146 522.3 352 71.6
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 7.4e-146 521.2 411 59.9
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 1.6e-145 520.0 425 59.8
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 2.8e-145 519.2 424 60.6
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.1e-144 517.3 432 60.0
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 1.4e-144 516.9 424 58.7
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 5.3e-144 515.0 422 58.3
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 4.5e-143 511.9 424 58.5
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 8.4e-142 507.7 443 58.7
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 3.2e-141 505.8 424 57.5
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 3.0e-139 499.2 412 65.5
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.1e-136 490.7 432 60.6
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.0e-134 484.2 412 62.1
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 2.2e-134 483.0 339 68.4
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 4.6e-132 475.3 452 57.5
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 1.0e-131 474.2 401 57.6
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 1.8e-131 473.4 415 61.7
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 3.3e-130 469.2 339 65.2
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 8.2e-129 464.5 389 64.0
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 6.9e-128 461.5 425 58.6
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 1.3e-126 457.2 418 54.8
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 3.8e-126 455.7 328 69.8
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 1.9e-125 453.4 430 51.6
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 4.2e-125 452.2 462 52.8
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 8.5e-118 427.9 423 57.0
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 3.2e-117 426.0 264 80.7
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.6e-111 407.1 428 52.1
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 5.7e-98 362.1 387 48.8
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.7e-94 350.5 429 47.3
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 1.4e-91 340.9 368 48.6
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 7.5e-90 335.1 312 57.1
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.7e-89 334.0 320 55.6
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 4.5e-87 325.9 218 67.4
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 1.6e-84 317.4 323 49.8
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 4.6e-79 299.3 315 49.8
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 2.6e-66 256.9 307 43.0
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 6.0e-55 219.2 135 71.1
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 2.3e-54 217.2 128 78.9
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 7.3e-53 212.2 198 54.0
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.9e-46 189.9 223 44.8
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 4.3e-45 186.4 122 68.9
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 2.0e-34 151.0 105 66.7
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 5.5e-32 142.9 110 69.1
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 3.0e-30 137.1 161 46.0
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 1.4e-27 128.3 92 76.1
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 4.5e-26 123.2 134 50.7
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.3e-20 105.1 129 43.4
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.1e-19 100.5 129 41.9
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 5.7e-13 79.7 53 60.4
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 2.9e-09 67.4 131 35.9
BcaC04g24204 Brassica carinata HOM05D006079 ORTHO05D032748 6.5e-09 66.2 53 52.8


User provided reference genes

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