Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 1.1e-142 510.0 256 100.0
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 2.3e-121 439.1 255 85.1
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.4e-110 403.3 272 76.1
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 5.5e-107 391.3 249 78.3
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 9.1e-102 374.0 251 76.1
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 1.2e-101 373.6 248 74.2
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 2.5e-99 365.9 251 72.9
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.2e-99 365.5 254 73.6
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 3.2e-99 365.5 254 73.6
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 4.2e-99 365.2 251 71.7
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 8.0e-98 360.9 249 71.1
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 8.8e-97 357.5 246 70.3
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 9.8e-96 354.0 246 72.8
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 1.3e-95 353.6 248 71.0
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 1.3e-95 353.6 250 68.4
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 1.3e-95 353.6 250 70.4
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.8e-95 352.4 248 71.4
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 3.7e-95 352.1 250 68.0
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 6.3e-95 351.3 250 71.2
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 6.3e-95 351.3 251 70.9
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 8.3e-95 350.9 243 70.0
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 1.8e-94 349.7 243 72.4
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 3.1e-94 349.0 246 71.5
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 5.4e-94 348.2 245 72.7
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 5.4e-94 348.2 286 64.0
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.2e-93 347.1 247 70.0
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 1.6e-93 346.7 245 71.8
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 2.0e-93 346.3 246 70.3
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 2.7e-93 345.9 247 69.6
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 3.5e-93 345.5 250 66.8
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 5.9e-93 344.7 244 71.7
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 7.7e-93 344.4 246 70.3
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 1.7e-92 343.2 251 70.1
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.3e-92 342.8 245 70.2
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 2.3e-92 342.8 242 71.9
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 1.1e-91 340.5 248 70.6
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 1.1e-91 340.5 246 68.3
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 1.9e-91 339.7 253 65.6
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 5.5e-91 338.2 247 68.8
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 7.2e-91 337.8 243 70.4
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 1.2e-90 337.0 246 67.1
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 3.0e-89 332.4 238 70.6
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 5.2e-89 331.6 244 67.6
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 6.8e-89 331.3 231 72.3
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 8.9e-89 330.9 246 67.1
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 2.0e-88 329.7 246 67.9
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 2.6e-88 329.3 242 67.8
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 1.7e-87 326.6 244 65.6
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 1.7e-87 326.6 249 67.9
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 1.7e-87 326.6 249 67.9
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 2.8e-87 325.9 246 66.3
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 3.7e-87 325.5 248 64.1
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 4.9e-87 325.1 231 72.3
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 6.3e-87 324.7 248 66.1
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 1.1e-86 323.9 244 65.2
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 3.1e-86 322.4 244 63.9
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 3.1e-86 322.4 240 66.2
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 3.1e-86 322.4 246 64.2
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 9.2e-86 320.9 243 66.3
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 9.2e-86 320.9 253 64.8
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 1.6e-85 320.1 225 68.0
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 2.0e-85 319.7 246 64.2
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 3.5e-85 318.9 244 63.9
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 3.5e-85 318.9 244 65.6
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 4.5e-85 318.5 243 63.8
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 4.5e-85 318.5 241 66.4
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 4.5e-85 318.5 244 63.1
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 7.8e-85 317.8 241 65.6
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 1.7e-84 316.6 241 65.1
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 2.3e-84 316.2 244 63.1
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 2.3e-84 316.2 244 63.1
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 2.3e-84 316.2 242 65.7
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 2.3e-84 316.2 246 65.0
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 2.9e-84 315.8 244 62.7
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 2.9e-84 315.8 244 62.7
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 3.8e-84 315.5 244 64.8
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 5.0e-84 315.1 244 62.7
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 5.0e-84 315.1 244 63.1
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 6.6e-84 314.7 244 63.1
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 1.1e-83 313.9 244 63.9
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 1.5e-83 313.5 244 61.9
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.5e-83 313.5 244 61.9
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 1.5e-83 313.5 244 61.9
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 1.9e-83 313.2 241 63.9
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 1.6e-82 310.1 248 62.9
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 8.0e-82 307.8 241 65.6
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 4.0e-81 305.4 248 63.7
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 2.0e-80 303.1 234 64.1
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 4.4e-80 302.0 235 66.4
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 8.3e-79 297.7 231 66.2
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 1.4e-78 297.0 193 77.7
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 2.7e-77 292.7 238 61.3
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 3.5e-77 292.4 194 74.7
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 4.6e-77 292.0 234 63.2
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 7.8e-77 291.2 241 61.4
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 1.9e-75 286.6 194 75.3
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 2.5e-75 286.2 221 65.2
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.1e-73 280.8 244 61.1
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 1.1e-73 280.8 319 51.7
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 1.4e-73 280.4 243 56.8
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 3.1e-73 279.3 247 60.7
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 1.2e-72 277.3 209 70.3
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.7e-71 273.5 189 72.0
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 2.2e-71 273.1 229 59.8
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.9e-70 270.0 250 58.8
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 7.0e-70 268.1 246 59.3
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 3.5e-69 265.8 236 60.2
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 5.1e-68 261.9 236 59.7
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 2.5e-67 259.6 244 58.2
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 8.1e-66 254.6 240 52.5
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 2.6e-64 249.6 237 53.6
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 5.8e-64 248.4 251 55.4
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 4.6e-61 238.8 232 51.7
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 1.3e-60 237.3 163 69.9
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 7.3e-51 204.9 223 48.4
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 7.3e-51 204.9 139 76.3
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 2.1e-50 203.4 157 65.0
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 2.8e-50 203.0 157 62.4
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 1.1e-49 201.1 238 44.1
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 2.4e-46 189.9 141 68.8
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 1.9e-38 163.7 131 62.6
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 3.3e-35 152.9 224 37.9
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.2e-31 140.2 85 81.2
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 2.5e-30 136.7 228 36.4
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 6.7e-20 102.1 79 60.8
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 6.7e-20 102.1 79 60.8
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 8.7e-20 101.7 83 61.4
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 1.5e-19 100.9 79 62.0
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 8.5e-15 85.1 64 71.9
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 9.7e-11 71.6 58 51.7


User provided reference genes

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