Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 9.3e-78 293.5 152 100.0
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 4.1e-33 145.2 86 89.5
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 6.5e-31 137.9 87 81.6
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.2e-30 135.2 85 82.4
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 7.0e-25 117.9 84 73.8
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 7.0e-25 117.9 84 73.8
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 5.5e-22 108.2 84 67.9
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.2e-21 107.1 84 65.5
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.2e-21 107.1 84 65.5
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 1.2e-21 107.1 84 65.5
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 1.6e-21 106.7 84 65.5
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 1.6e-21 106.7 82 64.6
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 1.6e-21 106.7 81 69.1
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.8e-21 105.9 84 66.7
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 2.8e-21 105.9 81 65.4
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 3.6e-21 105.5 84 65.5
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 3.6e-21 105.5 84 63.1
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 8.0e-21 104.4 81 65.4
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 1.4e-20 103.6 86 60.5
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 1.4e-20 103.6 81 65.4
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 1.8e-20 103.2 83 66.3
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 1.8e-20 103.2 81 65.4
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.8e-20 103.2 81 65.4
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.0e-20 102.4 83 66.3
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 4.0e-20 102.1 86 61.6
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 5.2e-20 101.7 84 63.1
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 5.2e-20 101.7 81 64.2
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 5.2e-20 101.7 81 64.2
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 8.8e-20 100.9 80 66.2
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 2.0e-19 99.8 77 67.5
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 2.6e-19 99.4 81 64.2
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 2.6e-19 99.4 84 63.1
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 3.4e-19 99.0 84 63.1
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 9.8e-19 97.4 84 58.3
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.3e-18 97.1 84 58.3
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 1.7e-18 96.7 84 61.9
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 1.7e-18 96.7 84 61.9
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 2.2e-18 96.3 81 63.0
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.8e-18 95.9 81 59.3
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 3.7e-18 95.5 84 59.5
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 3.7e-18 95.5 84 59.5
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 4.9e-18 95.1 84 60.7
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.9e-18 95.1 81 59.3
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 4.9e-18 95.1 81 59.3
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 6.3e-18 94.7 104 50.0
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 8.3e-18 94.4 84 61.9
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 8.3e-18 94.4 84 58.3
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.1e-17 94.0 84 61.9
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.1e-17 94.0 84 60.7
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 3.1e-17 92.4 84 59.5
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 5.4e-17 91.7 85 55.3
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 5.4e-17 91.7 84 53.6
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 7.0e-17 91.3 85 54.1
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 7.0e-17 91.3 84 57.1
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 9.2e-17 90.9 80 56.2
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 9.2e-17 90.9 80 55.0
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 9.2e-17 90.9 79 59.5
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 1.2e-16 90.5 81 53.1
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 1.6e-16 90.1 81 54.3
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 2.0e-16 89.7 81 55.6
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.7e-16 89.4 85 52.9
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 2.7e-16 89.4 85 52.9
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 2.7e-16 89.4 78 59.0
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 7.8e-16 87.8 81 56.8
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 1.0e-15 87.4 80 53.8
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 1.0e-15 87.4 78 55.1
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 1.0e-15 87.4 78 55.1
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 1.3e-15 87.0 84 56.0
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 1.3e-15 87.0 80 52.5
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 1.7e-15 86.7 79 53.2
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 1.7e-15 86.7 79 53.2
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 1.7e-15 86.7 79 53.2
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.7e-15 86.7 79 53.2
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 1.7e-15 86.7 80 51.2
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 2.9e-15 85.9 89 48.3
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 3.8e-15 85.5 79 51.9
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 6.6e-15 84.7 117 43.6
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.2e-12 75.1 79 44.3
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.2e-11 73.9 64 57.8
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 1.2e-11 73.9 79 44.3
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 1.5e-11 73.6 49 73.5
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 8.3e-10 67.8 45 75.6
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 2.7e-08 62.8 44 72.7
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 5.9e-08 61.6 44 70.5
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 3.3e-06 55.8 77 37.7
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 5.6e-06 55.1 70 41.4


User provided reference genes

Program Settings