Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 6.7e-122 440.7 215 100.0
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 1.8e-90 336.3 261 67.0
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.3e-82 309.3 244 65.2
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 9.7e-81 303.9 250 63.6
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 5.5e-76 288.1 257 58.8
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 5.5e-76 288.1 260 58.1
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 9.4e-76 287.3 259 57.1
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 2.1e-75 286.2 255 57.3
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 8.0e-75 284.3 283 54.4
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 1.0e-74 283.9 261 57.9
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.2e-73 280.4 263 57.8
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 1.2e-73 280.4 263 57.8
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.6e-73 279.3 258 56.2
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 4.4e-73 278.5 262 56.9
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 5.7e-73 278.1 260 55.8
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 2.8e-72 275.8 259 54.1
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 6.3e-72 274.6 260 55.4
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.3e-72 274.6 260 55.4
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 8.3e-72 274.2 261 55.2
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 1.2e-70 270.4 263 53.6
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 1.6e-70 270.0 260 55.0
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 2.0e-70 269.6 259 56.8
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 4.5e-70 268.5 265 54.0
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 4.5e-70 268.5 247 55.5
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 4.5e-70 268.5 261 53.3
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 7.7e-70 267.7 263 53.2
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 7.7e-70 267.7 262 53.8
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.3e-69 266.9 246 56.5
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 1.7e-69 266.5 251 54.6
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 2.9e-69 265.8 244 57.0
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 5.0e-69 265.0 261 54.0
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 5.0e-69 265.0 258 55.4
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 6.5e-69 264.6 263 52.5
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 1.1e-68 263.8 260 53.8
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 1.9e-68 263.1 261 52.1
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.9e-68 263.1 263 52.5
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.9e-68 263.1 252 55.6
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 5.5e-68 261.5 285 49.8
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 7.2e-68 261.2 268 52.2
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 9.4e-68 260.8 261 51.7
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 1.2e-67 260.4 261 53.3
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 2.7e-67 259.2 265 51.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 3.6e-67 258.8 258 52.3
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.7e-67 258.5 209 64.6
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 4.7e-67 258.5 257 52.9
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 4.7e-67 258.5 248 54.0
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 8.0e-67 257.7 262 53.4
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 1.0e-66 257.3 253 53.0
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 1.0e-66 257.3 266 51.5
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 1.0e-66 257.3 262 53.4
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 1.4e-66 256.9 265 50.9
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 1.8e-66 256.5 255 52.5
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 2.3e-66 256.1 263 52.9
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 4.0e-66 255.4 260 51.9
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 4.0e-66 255.4 243 53.5
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 4.0e-66 255.4 246 52.8
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.2e-65 253.8 265 50.9
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 1.5e-65 253.4 256 53.5
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 2.0e-65 253.1 273 50.9
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 2.0e-65 253.1 262 52.3
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 2.6e-65 252.7 261 52.9
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.4e-65 252.3 262 51.1
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 4.4e-65 251.9 260 49.2
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 5.7e-65 251.5 241 51.9
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 7.5e-65 251.1 269 50.6
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 7.5e-65 251.1 262 50.8
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 7.5e-65 251.1 249 51.4
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 7.5e-65 251.1 261 52.1
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.3e-64 250.4 263 51.3
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 1.3e-64 250.4 263 50.6
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 1.7e-64 250.0 262 50.4
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 1.7e-64 250.0 243 52.7
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 3.7e-64 248.8 235 52.8
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 3.7e-64 248.8 235 52.8
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 3.7e-64 248.8 271 49.4
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 4.9e-64 248.4 244 51.2
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 4.9e-64 248.4 235 52.8
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 6.3e-64 248.1 249 50.6
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 8.3e-64 247.7 235 52.3
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.4e-63 246.9 261 52.9
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 1.8e-63 246.5 235 52.3
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.4e-63 245.0 262 51.9
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 9.2e-63 244.2 264 51.1
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.2e-62 243.8 240 52.1
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 1.6e-62 243.4 253 49.8
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.0e-62 243.0 244 50.0
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.7e-62 242.7 244 49.6
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 4.5e-62 241.9 242 50.0
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 7.7e-62 241.1 264 49.6
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.0e-61 240.7 244 49.6
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.3e-61 240.4 231 51.5
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.9e-61 239.2 239 53.1
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 1.5e-60 236.9 258 49.6
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 2.8e-59 232.6 245 48.6
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 5.2e-58 228.4 244 48.8
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 1.5e-57 226.9 251 48.6
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.9e-54 214.9 119 85.7
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 7.3e-52 208.0 278 41.7
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.8e-50 203.4 216 46.8
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 6.8e-50 201.4 220 47.7
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 5.8e-49 198.4 233 45.9
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 5.8e-49 198.4 274 40.1
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.9e-47 193.4 214 48.1
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.9e-47 193.4 229 46.3
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.9e-47 193.4 236 44.9
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 3.9e-45 185.7 119 72.3
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 8.6e-45 184.5 118 72.9
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 1.5e-44 183.7 230 43.5
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 5.6e-44 181.8 227 42.7
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 6.2e-43 178.3 119 72.3
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 8.1e-43 177.9 119 71.4
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 1.7e-40 170.2 119 68.1
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 4.9e-40 168.7 119 65.5
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.1e-39 167.5 176 50.0
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 8.6e-37 157.9 109 67.9
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 2.5e-36 156.4 257 37.0
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 3.6e-35 152.5 217 39.6
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.1e-31 139.0 82 76.8
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.0e-29 134.4 88 73.9
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 9.6e-28 127.9 205 42.0
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 2.8e-27 126.3 191 37.7
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.4e-26 123.2 99 62.6
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 4.0e-26 122.5 90 66.7
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 4.0e-26 122.5 99 63.6
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.2e-25 120.9 100 60.0
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 3.2e-23 112.8 92 60.9
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 1.9e-20 103.6 89 58.4
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 3.6e-19 99.4 75 61.3
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 1.1e-18 97.8 76 53.9
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.2e-17 94.4 92 50.0
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 9.3e-15 84.7 61 57.4
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 9.3e-15 84.7 61 57.4
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 4.0e-10 69.3 86 46.5
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 1.2e-09 67.8 46 60.9
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.4e-09 66.2 86 45.3
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 3.4e-09 66.2 86 45.3
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 1.6e-06 57.4 36 66.7


User provided reference genes

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