Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g044520 Amaranthus hybridus HOM05D065232 ORTHO05D000002 1.8e-104 382.5 184 100.0
Ah.06g190440 Amaranthus hybridus HOM05D013246 ORTHO05D000002 4.8e-20 102.1 150 36.0
Ah.02g124620 Amaranthus hybridus HOM05D013246 ORTHO05D000002 5.9e-18 95.1 124 39.5
CANSAT35G0070 Cannabis sativa HOM05D000004 ORTHO05D000002 5.9e-18 95.1 142 40.1
Ah.02g117930 Amaranthus hybridus HOM05D016549 ORTHO05D000002 1.6e-15 87.0 99 41.4
CANSAT54G0404 Cannabis sativa HOM05D000004 ORTHO05D000002 2.1e-15 86.7 124 34.7
ClCG06G010650 Citrullus lanatus HOM05D000004 ORTHO05D000002 8.8e-14 81.3 119 34.5
ECA233G5755 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-13 79.3 125 30.4
ClCG03G009890 Citrullus lanatus HOM05D000004 ORTHO05D000002 4.4e-13 79.0 125 32.0
ClCG09G014290 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.7e-13 78.6 122 31.1
Ah.03g144640 Amaranthus hybridus HOM05D065232 ORTHO05D000002 1.3e-12 77.4 51 76.5
Ca_19490_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.8e-12 76.3 152 31.6
TWI15G0520 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.8e-12 76.3 121 31.4
Thhalv10003066m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 3.7e-12 75.9 120 31.7
Ca_12559_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.8e-12 75.5 121 33.9
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.8e-12 75.5 139 29.5
ECA232G0044 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.8e-12 75.5 123 30.9
Ca_07639_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.3e-12 75.1 152 31.6
Ca_11127_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 8.2e-12 74.7 126 30.2
Ca_19472_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.2e-12 74.7 139 30.2
Psat6g208920 Pisum sativum HOM05D000004 ORTHO05D000002 8.2e-12 74.7 136 31.6
Ca_16129_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-11 74.3 122 32.0
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.4e-11 73.2 139 29.5
VMungo0464G1208 Vigna mungo HOM05D000004 ORTHO05D000002 2.4e-11 73.2 134 31.3
Psat5g155160 Pisum sativum HOM05D000004 ORTHO05D000002 3.1e-11 72.8 124 32.3
Psat7g007480 Pisum sativum HOM05D000004 ORTHO05D000002 3.1e-11 72.8 124 32.3
Sp6g11780 Schrenkiella parvula HOM05D011239 ORTHO05D000002 3.1e-11 72.8 120 30.0
Carub.0001s3392 Capsella rubella HOM05D000004 ORTHO05D000002 4.1e-11 72.4 120 29.2
Sp6g11810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 4.1e-11 72.4 120 29.2
Ca_10432_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.3e-11 72.0 121 32.2
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 5.3e-11 72.0 139 29.5
Sp2g06690 Schrenkiella parvula HOM05D008905 ORTHO05D000002 5.3e-11 72.0 140 31.4
Psat4g137240 Pisum sativum HOM05D000004 ORTHO05D000002 7.0e-11 71.6 124 29.8
BcaC05g27699 Brassica carinata HOM05D033294 ORTHO05D032665 1.2e-10 70.9 118 30.5
Psat5g213280 Pisum sativum HOM05D000004 ORTHO05D000002 2.0e-10 70.1 140 31.4
VMungo1127G1769 Vigna mungo HOM05D003938 ORTHO05D004759 2.0e-10 70.1 112 33.0
ClCG03G010050 Citrullus lanatus HOM05D016213 ORTHO05D000002 2.6e-10 69.7 122 26.2
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 2.6e-10 69.7 128 32.0
Psat1g036880 Pisum sativum HOM05D000004 ORTHO05D000002 3.5e-10 69.3 124 31.5
Psat6g022920 Pisum sativum HOM05D000004 ORTHO05D000002 3.5e-10 69.3 112 30.4
Ciclev10030074m.g Citrus clementina HOM05D000004 ORTHO05D000002 4.5e-10 68.9 90 37.8
ClCG06G009980 Citrullus lanatus HOM05D000004 ORTHO05D000002 5.9e-10 68.6 125 31.2
Ca_16100_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.7e-10 68.2 119 29.4
Psat1g213840 Pisum sativum HOM05D000004 ORTHO05D000002 7.7e-10 68.2 173 28.9
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 7.7e-10 68.2 110 33.6
Psat5g191920 Pisum sativum HOM05D000004 ORTHO05D000002 1.0e-09 67.8 138 29.0
CsaV3_5G037150 Cucumis sativus L. HOM05D016213 ORTHO05D000002 1.3e-09 67.4 101 33.7
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 1.3e-09 67.4 130 31.5
SpUn0001_0220 Schrenkiella parvula HOM05D008905 ORTHO05D000002 1.3e-09 67.4 124 32.3
TPR.G17488 Trifolium pratense HOM05D000004 ORTHO05D000002 1.3e-09 67.4 122 30.3
Psat0s1287g0080 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-09 66.6 123 31.7
TPR.G31865 Trifolium pratense HOM05D000004 ORTHO05D000002 2.9e-09 66.2 139 28.8
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.8e-09 65.9 140 25.0
VMungo0720G2483 Vigna mungo HOM05D002038 ORTHO05D030727 3.8e-09 65.9 133 32.3
Lalb_Chr24g0402721 Lupinus albus HOM05D000004 ORTHO05D000002 5.0e-09 65.5 102 34.3
Ca_07517_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.5e-09 65.1 131 25.2
Ca_12602_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000002 6.5e-09 65.1 122 33.6
RcHm_v2.0_Chr5g0078031 Rosa chinensis HOM05D000004 ORTHO05D000002 8.5e-09 64.7 121 29.8
Ca_11845_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-08 64.3 132 25.0
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 1.5e-08 63.9 119 31.1
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 1.5e-08 63.9 119 31.1
Sp7g10840 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.5e-08 63.9 164 28.7
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 1.5e-08 63.9 122 30.3
Ca_14712_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-08 63.5 146 24.7
AagrBONN_evm.TU.Sc2ySwM_344.1167 Anthoceros agrestis HOM05D009094 ORTHO05D011371 2.5e-08 63.2 144 27.1
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.5e-08 63.2 120 29.2
AagrBONN_evm.TU.Sc2ySwM_362.319 Anthoceros agrestis HOM05D009094 ORTHO05D011371 4.2e-08 62.4 134 28.4
AagrBONN_evm.TU.Sc2ySwM_362.320 Anthoceros agrestis HOM05D009094 ORTHO05D011371 4.2e-08 62.4 134 28.4
AUR62019722 Chenopodium quinoa HOM05D000178 ORTHO05D000229 5.5e-08 62.0 80 41.2
Ah.05g174530 Amaranthus hybridus HOM05D016549 ORTHO05D000002 7.2e-08 61.6 131 29.8
AagrBONN_evm.TU.Sc2ySwM_228.3958 Anthoceros agrestis HOM05D009094 ORTHO05D011371 7.2e-08 61.6 144 26.4
COL.COLO4_20628 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.2e-08 61.6 184 26.6
Ah.09g237740 Amaranthus hybridus HOM05D016549 ORTHO05D000002 9.4e-08 61.2 70 38.6
Atru.chr6.521 Acer truncatum HOM05D000004 ORTHO05D000002 1.2e-07 60.8 141 27.0
Ah.04g149290 Amaranthus hybridus HOM05D013246 ORTHO05D000002 1.2e-07 60.8 88 36.4
Ah.15g096030 Amaranthus hybridus HOM05D016549 ORTHO05D000002 1.2e-07 60.8 54 48.1
Ca_10305_v3 Cicer arietinum L. HOM05D001134 ORTHO05D000002 1.6e-07 60.5 100 30.0
Ca_26814_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.6e-07 60.5 116 27.6
ClCG06G009810 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.1e-07 60.1 120 27.5
ECA238G3110 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-07 60.1 123 27.6
Ca_08465_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.7e-07 59.7 78 33.3
Ca_27418_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.7e-07 59.7 127 29.1
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 2.7e-07 59.7 120 25.8
AagrBONN_evm.TU.Sc2ySwM_362.1130 Anthoceros agrestis HOM05D009094 ORTHO05D011371 3.6e-07 59.3 134 29.1
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-07 58.9 149 25.5
PSO782G1339 Papaver somniferum HOM05D000004 ORTHO05D000002 4.7e-07 58.9 120 29.2
Sopen10g028470 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-07 58.9 118 25.4
PSO675G7897 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-07 58.5 157 27.4
Sed0004979 Sechium edule HOM05D000004 ORTHO05D000002 6.1e-07 58.5 120 27.5
MELO3C002493.2 Cucumis melo HOM05D000004 ORTHO05D000002 8.0e-07 58.2 122 27.0
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.0e-06 57.8 120 27.5
PSO198G0084 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-06 57.8 120 30.0
Psat4g053400 Pisum sativum HOM05D000004 ORTHO05D000002 1.0e-06 57.8 120 28.3
Sp4g05780 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.0e-06 57.8 121 30.6
Ca_02743_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-06 57.4 84 36.9
Ca_07633_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-06 57.4 84 36.9
Ca_13622_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-06 57.4 149 28.9
ECA238G4415 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 57.4 125 27.2
PSO782G4520 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-06 57.4 122 28.7
arahy.Tifrunner.gnm1.ann1.K49PTT Arachis hypogaea HOM05D000004 ORTHO05D000002 1.8e-06 57.0 124 26.6
Ca_22696_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-06 57.0 84 35.7
CsaV3_1G011190 Cucumis sativus L. HOM05D000004 ORTHO05D000002 1.8e-06 57.0 122 27.0
AUR62033568 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.3e-06 56.6 148 25.7
Ca_03855_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.3e-06 56.6 116 28.4
Ca_07730_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.3e-06 56.6 92 30.4
SHI16403 Sapria himalayana HOM05D000004 ORTHO05D000002 2.3e-06 56.6 138 29.0
Phvul.004G050550 Phaseolus vulgaris HOM05D000004 ORTHO05D000002 3.0e-06 56.2 116 31.9
Psat3g172640 Pisum sativum HOM05D000028 ORTHO05D000390 3.0e-06 56.2 99 28.3
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 3.0e-06 56.2 113 29.2
Ca_12969_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.0e-06 55.8 80 33.8
Psat0s45g0080 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 55.8 112 31.2
Psat7g172320 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 55.8 97 28.9
AagrBONN_evm.TU.Sc2ySwM_228.1900 Anthoceros agrestis HOM05D009094 ORTHO05D011371 5.2e-06 55.5 144 25.0
Ca_01724_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 5.2e-06 55.5 141 27.0
Psat3g115000 Pisum sativum HOM05D003122 ORTHO05D000002 5.2e-06 55.5 131 29.0
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 5.2e-06 55.5 84 33.3
Ca_23810_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.7e-06 55.1 120 26.7
PSO170G4312 Papaver somniferum HOM05D000004 ORTHO05D000002 6.7e-06 55.1 146 27.4
Ca_04545_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.8e-06 54.7 69 31.9
Sed0012281 Sechium edule HOM05D000004 ORTHO05D000002 8.8e-06 54.7 120 25.8
TPR.G6695 Trifolium pratense HOM05D000004 ORTHO05D000002 8.8e-06 54.7 134 23.9


User provided reference genes

Program Settings