Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g044400 Amaranthus hybridus HOM05D000144 ORTHO05D007858 8.0e-203 710.3 380 100.0
EL10Ac2g03820 Beta vulgaris HOM05D000144 ORTHO05D007858 1.2e-163 580.1 383 82.2
AUR62009111 Chenopodium quinoa HOM05D000144 ORTHO05D007858 3.9e-157 558.5 385 79.7
AUR62039153 Chenopodium quinoa HOM05D000144 ORTHO05D007858 9.6e-148 527.3 446 68.8
Hund03313 Selenicereus undatus HOM05D000144 ORTHO05D007858 3.0e-141 505.8 391 70.8
Sc06g0001040 Simmondsia chinensis HOM05D000144 ORTHO05D007858 2.6e-137 492.7 387 71.3
Gohir.A06G085500 Gossypium hirsutum HOM05D000144 ORTHO05D007858 2.7e-126 456.1 384 65.9
Manes.03G050500 Manihot esculenta HOM05D000144 ORTHO05D007858 2.7e-126 456.1 383 67.6
Gohir.D06G084800 Gossypium hirsutum HOM05D000144 ORTHO05D007858 6.0e-126 454.9 384 65.9
Duzib168G0360 Durio zibethinus HOM05D000144 ORTHO05D007858 3.9e-125 452.2 382 65.4
Gorai.010G098200 Gossypium raimondii HOM05D000144 ORTHO05D007858 5.1e-125 451.8 384 65.4
Thecc.09G058100 Theobroma cacao HOM05D000144 ORTHO05D007858 5.1e-125 451.8 382 67.0
ClCG05G018040 Citrullus lanatus HOM05D000144 ORTHO05D007858 8.7e-125 451.1 383 66.1
TWI34G0926 Tripterygium wilfordii HOM05D000144 ORTHO05D007858 1.5e-124 450.3 381 65.9
Lalb_Chr14g0375501 Lupinus albus HOM05D000144 ORTHO05D007858 3.3e-124 449.1 385 64.9
COL.COLO4_21097 Corchorus olitorius HOM05D000144 ORTHO05D007858 5.6e-124 448.4 384 66.1
Actinidia25710 Actinidia chinensis HOM05D000144 ORTHO05D007858 1.6e-123 446.8 381 65.4
CiPaw.15G036300 Carya illinoinensis HOM05D000144 ORTHO05D007858 2.8e-123 446.0 381 64.8
Ciclev10008108m.g Citrus clementina HOM05D000144 ORTHO05D007858 1.1e-122 444.1 383 65.5
MELO3C016887.2 Cucumis melo HOM05D000144 ORTHO05D007858 1.1e-122 444.1 383 66.3
CSS0040828 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D007858 1.8e-122 443.4 382 64.9
Atru.chr7.1929 Acer truncatum HOM05D000144 ORTHO05D007858 2.0e-121 439.9 385 66.0
Potri.018G061700 Populus trichocarpa HOM05D000144 ORTHO05D007858 1.3e-120 437.2 396 64.4
CsaV3_4G035820 Cucumis sativus L. HOM05D000144 ORTHO05D007858 4.9e-120 435.3 385 64.4
VMungo0647G2473 Vigna mungo HOM05D000144 ORTHO05D007858 4.9e-120 435.3 384 65.4
TPR.G9944 Trifolium pratense HOM05D000144 ORTHO05D007858 2.5e-119 433.0 385 63.4
TAR626G1661 Trochodendron aralioides HOM05D000144 ORTHO05D007858 2.5e-119 433.0 383 62.7
QL02p000650 Quercus lobata HOM05D000144 ORTHO05D007858 4.2e-119 432.2 381 63.5
CANSAT25G1581 Cannabis sativa HOM05D000144 ORTHO05D007858 5.5e-119 431.8 384 63.3
Phvul.001G045200 Phaseolus vulgaris HOM05D000144 ORTHO05D007858 7.1e-119 431.4 384 64.8
Glyma.17G218800 Glycine max HOM05D000144 ORTHO05D007858 9.3e-119 431.0 384 65.6
GSVIVG01035415001 Vitis vinifera HOM05D000144 ORTHO05D007858 1.3e-117 427.2 384 62.2
Rhsim08G0158500 Rhododendron simsii HOM05D000144 ORTHO05D007858 3.0e-117 426.0 382 62.8
Sed0010774 Sechium edule HOM05D000144 ORTHO05D007858 6.7e-117 424.9 383 63.7
Prupe.1G408500 Prunus persica HOM05D000144 ORTHO05D007858 1.9e-116 423.3 384 63.3
THA.LOC104811050 Tarenaya hassleriana HOM05D000144 ORTHO05D007858 1.9e-116 423.3 386 61.4
Sabra06G0174200 Salix brachista HOM05D000144 ORTHO05D007858 7.4e-116 421.4 421 61.0
Nitab4.5_0003730g0080 Nicotiana tabacum HOM05D000144 ORTHO05D007858 1.3e-115 420.6 382 61.3
Psat1g180840 Pisum sativum HOM05D000144 ORTHO05D007858 1.1e-114 417.5 387 61.2
Hma1.2p1_0196F.1_g084860 Hydrangea macrophylla HOM05D000144 ORTHO05D007858 3.1e-114 416.0 381 61.9
HanXRQChr09g0248311 Helianthus annuus HOM05D000144 ORTHO05D007858 4.1e-114 415.6 382 61.8
Nn6g35544 Nelumbo nucifera HOM05D000144 ORTHO05D007858 6.9e-114 414.8 390 61.3
Nitab4.5_0003458g0020 Nicotiana tabacum HOM05D000144 ORTHO05D007858 9.0e-114 414.5 382 61.0
Aqoxy7G04003 Aquilegia oxysepala HOM05D000144 ORTHO05D007858 2.0e-113 413.3 389 61.7
Solyc08g062700.3 Solanum lycopersicum HOM05D000144 ORTHO05D007858 5.9e-113 411.8 380 60.5
Sopen08g018230 Solanum pennellii HOM05D000144 ORTHO05D007858 5.0e-112 408.7 380 60.5
Haze_18149 Corylus avellana HOM05D000144 ORTHO05D007858 1.1e-111 407.5 381 59.3
PSO210G0248 Papaver somniferum HOM05D000144 ORTHO05D007858 3.2e-111 406.0 375 60.8
Lj5g0003534 Lotus japonicus HOM05D000144 ORTHO05D007858 7.2e-111 404.8 423 56.7
CAN.G56.1 Capsicum annuum HOM05D000144 ORTHO05D007858 6.1e-110 401.7 380 59.2
FAN24G0598 Fragaria x ananassa HOM05D000144 ORTHO05D007858 1.0e-109 401.0 386 60.4
C01p05610 Brassica napus HOM05D000144 ORTHO05D007858 1.8e-109 400.2 386 60.6
BcaC09g52104 Brassica carinata HOM05D000144 ORTHO05D007858 3.9e-109 399.1 386 60.4
BolC1t00541H Brassica oleracea HOM05D000144 ORTHO05D007858 8.8e-109 397.9 386 60.4
Lsat_1_v5_gn_7_61241 Lactuca sativa HOM05D000144 ORTHO05D007858 8.8e-109 397.9 382 59.2
unitig_748.g7531 Utricularia gibba HOM05D000144 ORTHO05D007858 1.1e-108 397.5 382 59.4
Sp7g30820 Schrenkiella parvula HOM05D000144 ORTHO05D007858 1.5e-108 397.1 386 59.8
PSO210G1977 Papaver somniferum HOM05D000144 ORTHO05D007858 2.0e-108 396.7 376 60.1
Cfa017981 Carpinus fangiana HOM05D000144 ORTHO05D007858 2.5e-108 396.4 382 58.1
A01p05130 Brassica napus HOM05D000144 ORTHO05D007858 3.3e-108 396.0 384 60.4
BraA01t00496Z Brassica rapa HOM05D000144 ORTHO05D007858 3.3e-108 396.0 386 59.8
Thhalv10025014m.g Eutrema salsugineum HOM05D000144 ORTHO05D007858 9.7e-108 394.4 386 59.6
AT4G33060 Arabidopsis thaliana HOM05D000144 ORTHO05D007858 1.3e-107 394.0 395 58.7
SGA_v2.0_scaffold20G09201 Striga asiatica HOM05D000144 ORTHO05D007858 1.3e-107 394.0 393 59.3
Carub.0007s0739 Capsella rubella HOM05D000144 ORTHO05D007858 8.2e-107 391.3 393 59.5
Cc08_g10950 Coffea canephora HOM05D000144 ORTHO05D007858 1.2e-105 387.5 384 57.8
SalBow4G0930 Salvia bowleyana HOM05D000144 ORTHO05D007858 2.0e-105 386.7 381 59.3
AL7G18520 Arabidopsis lyrata HOM05D000144 ORTHO05D007858 3.4e-105 386.0 395 58.0
MSTRG.25969 Avicennia marina HOM05D000144 ORTHO05D007858 1.3e-104 384.0 387 59.4
arahy.Tifrunner.gnm1.ann1.ZKP4WK Arachis hypogaea HOM05D000144 ORTHO05D007858 1.9e-103 380.2 399 58.4
MD15G1055400 Malus domestica HOM05D000144 ORTHO05D007858 1.9e-103 380.2 385 59.2
Aa31sc290G20 Aethionema arabicum HOM05D000144 ORTHO05D007858 2.7e-102 376.3 400 57.2
FAN20G1720 Fragaria x ananassa HOM05D000144 ORTHO05D007858 4.7e-102 375.6 386 57.3
FAN15G0369 Fragaria x ananassa HOM05D000144 ORTHO05D007858 8.8e-101 371.3 386 56.2
FvH4_2g31480 Fragaria vesca HOM05D000144 ORTHO05D007858 2.0e-100 370.2 386 56.7
arahy.Tifrunner.gnm1.ann1.K67LMX Arachis hypogaea HOM05D000144 ORTHO05D007858 3.1e-98 362.8 398 56.8
ECA240G1772 Erigeron canadensis HOM05D000144 ORTHO05D007858 5.3e-98 362.1 381 55.6
Migut.A00110 Erythranthe guttata HOM05D000144 ORTHO05D007858 2.9e-96 356.3 383 55.9
MBI11_g29744_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D007858 3.6e-94 349.4 382 53.7
HPP92_022916 Vanilla planifolia HOM05D000144 ORTHO05D007858 3.3e-92 342.8 399 54.1
Os01g0582400 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D007858 6.3e-91 338.6 389 53.5
Ca_00658_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007858 2.6e-89 333.2 386 51.8
Eucgr.C00671 Eucalyptus grandis HOM05D000144 ORTHO05D007858 2.2e-88 330.1 389 52.7
DCAR_007737 Daucus carota HOM05D000144 ORTHO05D007858 2.5e-87 326.6 336 57.4
Mapoly0120s0015 Marchantia polymorpha HOM05D000144 ORTHO05D007858 1.2e-86 324.3 405 51.1
RcHm_v2.0_Chr6g0311311 Rosa chinensis HOM05D000144 ORTHO05D007858 4.4e-84 315.8 387 50.6
AagrBONN_evm.TU.Sc2ySwM_228.3582 Anthoceros agrestis HOM05D000144 ORTHO05D007858 3.5e-81 306.2 400 49.5
Medtr2g023120 Medicago truncatula HOM05D000144 ORTHO05D007858 6.8e-77 292.0 342 51.8
Ca_00702_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007858 7.5e-76 288.5 363 49.9
Pp3c19_19340 Physcomitrium patens HOM05D000144 ORTHO05D007858 5.4e-74 282.3 392 48.5
ATR0051G064 Amborella trichopoda HOM05D000144 ORTHO05D007858 1.0e-72 278.1 388 46.6
Hma1.2p1_0196F.1_g084850 Hydrangea macrophylla HOM05D000144 ORTHO05D007858 3.8e-72 276.2 239 63.2
Dinv12442 Davidia involucrata HOM05D000144 ORTHO05D007858 5.7e-68 262.3 215 63.7
SMO201G0180 Selaginella moellendorffii HOM05D000144 ORTHO05D007858 5.7e-68 262.3 382 45.0
Peaxi162Scf00070g00028 Petunia axillaris HOM05D000144 ORTHO05D007858 4.9e-59 232.6 207 61.4
Cpa.g.sc7.149 Carica papaya HOM05D000144 ORTHO05D007858 8.3e-59 231.9 217 59.0
CARHR241070 Cardamine hirsuta HOM05D000144 ORTHO05D007858 3.5e-57 226.5 208 61.1
vmacro17526 Vaccinium macrocarpon HOM05D000144 ORTHO05D007858 4.6e-57 226.1 238 55.5
SHI18713 Sapria himalayana HOM05D000144 ORTHO05D007858 2.3e-53 213.8 206 58.7
Cpa.g.sc7.151 Carica papaya HOM05D000144 ORTHO05D007858 4.0e-53 213.0 151 74.2
BcaB01g04144 Brassica carinata HOM05D000144 ORTHO05D007858 3.4e-52 209.9 226 56.2
CBR_g18892 Chara braunii HOM05D000144 ORTHO05D007858 6.0e-49 199.1 317 44.2
Lj7A257G27 Lonicera japonica HOM05D000144 ORTHO05D007858 3.6e-46 189.9 134 69.4
MD08G1066000 Malus domestica HOM05D000144 ORTHO05D007858 8.9e-45 185.3 157 63.7
vmacro17527 Vaccinium macrocarpon HOM05D000144 ORTHO05D007858 2.2e-43 180.6 226 50.4
CARHR241080 Cardamine hirsuta HOM05D000144 ORTHO05D007858 4.6e-41 172.9 176 58.5
CDE02G3934 Ceratophyllum demersum HOM05D000144 ORTHO05D007858 4.6e-41 172.9 128 66.4
Dinv12444 Davidia involucrata HOM05D000144 ORTHO05D007858 1.8e-37 161.0 159 60.4
Zm00001eb160460 Zea mays HOM05D000144 ORTHO05D007858 1.3e-35 154.8 128 64.8
Peaxi162Scf00070g00025 Petunia axillaris HOM05D000144 ORTHO05D007858 1.7e-35 154.5 127 66.1
FAN27G1159 Fragaria x ananassa HOM05D000144 ORTHO05D007858 9.2e-34 148.7 152 57.9
Migut.J00024 Erythranthe guttata HOM05D000144 ORTHO05D007858 2.3e-32 144.1 308 39.3
SEGI_04912 Sequoiadendron giganteum HOM05D000144 ORTHO05D007858 4.4e-28 129.8 160 49.4
Oeu042976.1 Olea europaea HOM05D000144 ORTHO05D007858 3.8e-27 126.7 128 57.8
Oeu042977.1 Olea europaea HOM05D000144 ORTHO05D007858 3.8e-27 126.7 128 57.8
Oeu042978.1 Olea europaea HOM05D000144 ORTHO05D007858 3.8e-27 126.7 128 57.8
Potri.006G225167 Populus trichocarpa HOM05D000144 ORTHO05D331142 1.6e-25 121.3 174 47.1
BcaB08g35303 Brassica carinata HOM05D000144 ORTHO05D007858 2.1e-25 120.9 85 69.4
Cre04.g215950 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D007858 3.5e-25 120.2 144 45.8
TWI63G0465 Tripterygium wilfordii HOM05D000144 ORTHO05D413898 1.7e-24 117.9 142 49.3
MCO09G594 Micromonas commoda HOM05D000144 ORTHO05D007858 1.1e-21 108.6 140 47.9
Oeu018620.1 Olea europaea HOM05D000144 ORTHO05D007858 8.4e-19 99.0 54 81.5
CDE02G2645 Ceratophyllum demersum HOM05D000144 ORTHO05D007858 2.7e-17 94.0 122 50.0
SEGI_10238 Sequoiadendron giganteum HOM05D000144 ORTHO05D007858 1.0e-16 92.0 53 69.8
CDE02G2029 Ceratophyllum demersum HOM05D000144 ORTHO05D007858 2.1e-14 84.3 45 75.6
Haze_26949 Corylus avellana HOM05D000144 ORTHO05D007858 1.3e-08 65.1 308 27.3
Rhsim10G0180800 Rhododendron simsii HOM05D000144 ORTHO05D002661 3.9e-08 63.5 98 40.8
SalBow5G3780 Salvia bowleyana HOM05D002522 ORTHO05D002744 6.7e-08 62.8 181 38.1
SalBow4G1649 Salvia bowleyana HOM05D002522 ORTHO05D002744 4.8e-06 56.6 74 51.4


User provided reference genes

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