Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g044170 Amaranthus hybridus HOM05D007342 ORTHO05D009252 8.6e-171 604.4 532 100.0
AUR62020686 Chenopodium quinoa HOM05D007342 ORTHO05D009252 4.9e-57 226.5 240 55.0
AUR62028039 Chenopodium quinoa HOM05D007342 ORTHO05D009252 8.4e-49 199.1 312 42.0
EL10Ac2g03667 Beta vulgaris HOM05D007342 ORTHO05D009252 6.9e-43 179.5 320 40.6
Hund19378 Selenicereus undatus HOM05D007342 ORTHO05D009252 1.2e-42 178.7 247 49.4
Sc19g0005330 Simmondsia chinensis HOM05D007342 ORTHO05D009252 9.6e-21 105.9 234 35.9
Lj3P820T26 Lonicera japonica HOM05D007342 ORTHO05D009252 6.0e-15 86.7 318 33.3
ECA240G4261 Erigeron canadensis HOM05D007342 ORTHO05D009252 2.4e-11 74.7 251 32.7
COL.COLO4_13866 Corchorus olitorius HOM05D007342 ORTHO05D009252 6.9e-11 73.2 249 32.1
Aqoxy5G00727 Aquilegia oxysepala HOM05D007342 ORTHO05D009252 5.0e-09 67.0 253 29.6
Thecc.04G285100 Theobroma cacao HOM05D007342 ORTHO05D009252 5.0e-09 67.0 236 33.1
GSVIVG01017735001 Vitis vinifera HOM05D007342 ORTHO05D009252 5.0e-09 67.0 290 30.0
Glyma.07G247200 Glycine max HOM05D007342 ORTHO05D009252 1.1e-08 65.9 245 31.8
Cpa.g.sc16.174 Carica papaya HOM05D007342 ORTHO05D009252 1.9e-08 65.1 237 32.5
QL06p008994 Quercus lobata HOM05D007342 ORTHO05D009252 1.9e-08 65.1 231 33.3
ClCG06G005120 Citrullus lanatus HOM05D007342 ORTHO05D009252 2.5e-08 64.7 232 33.6
Cfa015389 Carpinus fangiana HOM05D007342 ORTHO05D009252 4.2e-08 63.9 250 31.2
MELO3C021329.2 Cucumis melo HOM05D007342 ORTHO05D009252 4.2e-08 63.9 224 31.7
Dinv29744 Davidia involucrata HOM05D007342 ORTHO05D009252 4.2e-08 63.9 255 28.6
FAN17G1678 Fragaria x ananassa HOM05D007342 ORTHO05D009252 4.2e-08 63.9 295 28.8
TWI53G0473 Tripterygium wilfordii HOM05D007342 ORTHO05D009252 4.2e-08 63.9 247 34.8
Duzib212G0754 Durio zibethinus HOM05D007342 ORTHO05D009252 5.5e-08 63.5 294 31.3
FAN12G0202 Fragaria x ananassa HOM05D007342 ORTHO05D009252 1.6e-07 62.0 241 30.7
Gorai.006G262500 Gossypium raimondii HOM05D007342 ORTHO05D009252 1.6e-07 62.0 220 33.6
Lj3P817T41 Lonicera japonica HOM05D007342 ORTHO05D009252 1.6e-07 62.0 188 35.6
RcHm_v2.0_Chr4g0422351 Rosa chinensis HOM05D007342 ORTHO05D009252 1.6e-07 62.0 294 30.6
PSO210G2737 Papaver somniferum HOM05D007342 ORTHO05D009252 2.1e-07 61.6 324 26.5
Actinidia14301 Actinidia chinensis HOM05D007342 ORTHO05D009252 2.7e-07 61.2 255 31.8
Gohir.D09G239700 Gossypium hirsutum HOM05D007342 ORTHO05D009252 3.6e-07 60.8 223 34.5
Sopen01g030760 Solanum pennellii HOM05D007342 ORTHO05D009252 3.6e-07 60.8 249 31.7
FvH4_4g18220 Fragaria vesca HOM05D007342 ORTHO05D009252 4.6e-07 60.5 241 30.3
FAN12G3549 Fragaria x ananassa HOM05D007342 ORTHO05D009252 4.6e-07 60.5 241 30.3
Actinidia00019 Actinidia chinensis HOM05D007342 ORTHO05D009252 6.1e-07 60.1 253 31.2
MSTRG.10096 Avicennia marina HOM05D007342 ORTHO05D009252 6.1e-07 60.1 257 30.0
Peaxi162Scf01123g00234 Petunia axillaris HOM05D007342 ORTHO05D009252 1.3e-06 58.9 237 32.1
Nitab4.5_0000059g0470 Nicotiana tabacum HOM05D007342 ORTHO05D009252 2.3e-06 58.2 247 31.2
Solyc01g080760.4 Solanum lycopersicum HOM05D007342 ORTHO05D009252 2.3e-06 58.2 249 31.3
Sed0007886 Sechium edule HOM05D007342 ORTHO05D009252 3.0e-06 57.8 230 32.6
Lj4g0010877 Lotus japonicus HOM05D007342 ORTHO05D009252 5.1e-06 57.0 254 30.7
PGSC0003DMG400006281 Solanum tuberosum HOM05D007342 ORTHO05D009252 5.1e-06 57.0 248 30.2
CsaV3_6G022280 Cucumis sativus L. HOM05D007342 ORTHO05D009252 6.7e-06 56.6 267 29.2
Gohir.A09G238800 Gossypium hirsutum HOM05D007342 ORTHO05D009252 6.7e-06 56.6 207 33.3
Nitab4.5_0000191g0200 Nicotiana tabacum HOM05D007342 ORTHO05D009252 8.7e-06 56.2 246 32.5


User provided reference genes

Program Settings