Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g044020 Amaranthus hybridus HOM05D001346 ORTHO05D001205 1.0e-151 540.0 278 100.0
EL10Ac2g03702 Beta vulgaris HOM05D001346 ORTHO05D001205 3.3e-57 226.1 348 46.8
AUR62020638 Chenopodium quinoa HOM05D001346 ORTHO05D001205 5.2e-42 175.6 263 45.2
AUR62038742 Chenopodium quinoa HOM05D001346 ORTHO05D001205 7.0e-39 165.2 262 43.9
Hund03268 Selenicereus undatus HOM05D001346 ORTHO05D001205 3.2e-23 113.2 184 42.9
CAN.G940.2 Capsicum annuum HOM05D001346 ORTHO05D001205 1.4e-15 87.8 99 47.5
CSS0032436 Camellia sinensis var. sinensis HOM05D001346 ORTHO05D001205 1.3e-13 81.3 278 29.9
Peaxi162Scf00045g01458 Petunia axillaris HOM05D001346 ORTHO05D001205 1.7e-13 80.9 358 29.1
CSS0028076 Camellia sinensis var. sinensis HOM05D001346 ORTHO05D001205 2.3e-13 80.5 278 29.9
Prupe.1G455300 Prunus persica HOM05D001346 ORTHO05D001205 3.9e-13 79.7 109 45.9
TAR383G0844 Trochodendron aralioides HOM05D001346 ORTHO05D001205 8.6e-13 78.6 303 30.0
Lsat_1_v5_gn_5_58820 Lactuca sativa HOM05D001346 ORTHO05D001205 5.6e-12 75.9 170 32.9
Sc09g0007330 Simmondsia chinensis HOM05D001346 ORTHO05D001205 5.6e-12 75.9 259 30.5
Nitab4.5_0003259g0120 Nicotiana tabacum HOM05D001346 ORTHO05D001205 2.1e-11 73.9 91 50.5
MD08G1123300 Malus domestica HOM05D001346 ORTHO05D001205 2.8e-11 73.6 138 39.9
GSVIVG01035557001 Vitis vinifera HOM05D001346 ORTHO05D001205 2.8e-11 73.6 281 28.8
Nitab4.5_0028413g0010 Nicotiana tabacum HOM05D001346 ORTHO05D001205 3.6e-11 73.2 90 50.0
PGSC0003DMG400014858 Solanum tuberosum HOM05D001346 ORTHO05D001205 3.6e-11 73.2 177 37.9
FAN27G0859 Fragaria x ananassa HOM05D001346 ORTHO05D001205 4.7e-11 72.8 190 33.7
DCAR_004549 Daucus carota HOM05D001346 ORTHO05D001205 6.2e-11 72.4 278 28.8
TWI32G0972 Tripterygium wilfordii HOM05D001346 ORTHO05D001205 1.1e-10 71.6 97 47.4
MD15G1102300 Malus domestica HOM05D001346 ORTHO05D001205 3.1e-10 70.1 198 33.3
TWI63G0206 Tripterygium wilfordii HOM05D001346 ORTHO05D001205 3.1e-10 70.1 120 41.7
Nn2g12732 Nelumbo nucifera HOM05D001346 ORTHO05D001205 4.0e-10 69.7 117 41.0
Migut.E01416 Erythranthe guttata HOM05D001346 ORTHO05D001205 5.2e-10 69.3 195 31.3
RcHm_v2.0_Chr6g0305501 Rosa chinensis HOM05D001346 ORTHO05D001205 2.0e-09 67.4 286 28.0
Glyma.14G139700 Glycine max HOM05D001346 ORTHO05D001205 2.6e-09 67.0 304 30.6
PGR044G1653 Punica granatum HOM05D001346 ORTHO05D001205 2.6e-09 67.0 345 26.7
DCAR_000690 Daucus carota HOM05D001346 ORTHO05D001205 5.8e-09 65.9 348 26.7
Hund19307 Selenicereus undatus HOM05D001346 ORTHO05D001205 5.8e-09 65.9 84 45.2
Actinidia03568 Actinidia chinensis HOM05D001346 ORTHO05D001205 7.5e-09 65.5 182 35.2
QL12p025990 Quercus lobata HOM05D001346 ORTHO05D001205 7.5e-09 65.5 136 38.2
CSS0019127 Camellia sinensis var. sinensis HOM05D001346 ORTHO05D001205 9.8e-09 65.1 136 38.2
HanXRQChr13g0412021 Helianthus annuus HOM05D001346 ORTHO05D001205 9.8e-09 65.1 173 31.2
Solyc08g006110.4 Solanum lycopersicum HOM05D001346 ORTHO05D001205 9.8e-09 65.1 174 36.2
Sopen08g002080 Solanum pennellii HOM05D001346 ORTHO05D001205 1.3e-08 64.7 179 36.9
Aqoxy7G02713 Aquilegia oxysepala HOM05D001346 ORTHO05D001205 2.2e-08 63.9 144 36.8
Manes.16G137300 Manihot esculenta HOM05D001346 ORTHO05D001205 2.2e-08 63.9 98 41.8
Cc00_g11390 Coffea canephora HOM05D001346 ORTHO05D001205 2.9e-08 63.5 251 27.1
FvH4_2g36400 Fragaria vesca HOM05D001346 ORTHO05D001205 2.9e-08 63.5 190 30.5
MSTRG.13936 Avicennia marina HOM05D001346 ORTHO05D001205 8.3e-08 62.0 180 31.7
HanXRQChr03g0082851 Helianthus annuus HOM05D001346 ORTHO05D001205 8.3e-08 62.0 153 35.3
Actinidia14153 Actinidia chinensis HOM05D001346 ORTHO05D001205 1.1e-07 61.6 182 30.2
ECA240G2878 Erigeron canadensis HOM05D001346 ORTHO05D001205 1.1e-07 61.6 136 33.8
Haze_21805 Corylus avellana HOM05D001346 ORTHO05D001205 2.4e-07 60.5 118 39.0
Rhsim07G0170900 Rhododendron simsii HOM05D001346 ORTHO05D001205 3.2e-07 60.1 86 45.3
ClCG08G012480 Citrullus lanatus HOM05D001346 ORTHO05D001205 4.1e-07 59.7 171 31.0
Cpa.g.sc244.3 Carica papaya HOM05D001346 ORTHO05D001205 5.4e-07 59.3 178 30.9
CDE04G1911 Ceratophyllum demersum HOM05D001346 ORTHO05D001205 5.4e-07 59.3 101 39.6
Psat6g006040 Pisum sativum HOM05D001346 ORTHO05D001205 9.2e-07 58.5 124 36.3
Lj1g0023247 Lotus japonicus HOM05D001346 ORTHO05D001205 1.6e-06 57.8 99 43.4
CiPaw.07G209100 Carya illinoinensis HOM05D001346 ORTHO05D001205 2.7e-06 57.0 340 27.1
Glyma.17G188500 Glycine max HOM05D001346 ORTHO05D001205 3.5e-06 56.6 285 28.8
HPP92_021889 Vanilla planifolia HOM05D001346 ORTHO05D001205 3.5e-06 56.6 81 45.7
PSO170G2213 Papaver somniferum HOM05D001346 ORTHO05D001205 4.6e-06 56.2 195 30.8
SGA_v2.0_scaffold54G19475 Striga asiatica HOM05D001346 ORTHO05D001205 6.0e-06 55.8 98 40.8
TPR.G12118 Trifolium pratense HOM05D001346 ORTHO05D001205 6.0e-06 55.8 123 33.3
Thecc.09G003800 Theobroma cacao HOM05D001346 ORTHO05D001205 7.8e-06 55.5 289 27.7


User provided reference genes

Program Settings