Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 0.0e+00 1088.2 671 100.0
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 6.5e-91 339.3 722 41.7
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.8e-73 280.8 559 41.3
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 2.8e-73 280.8 559 41.3
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 7.3e-58 229.6 718 33.7
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 1.6e-57 228.4 573 36.3
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 2.8e-57 227.6 745 34.4
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 3.6e-57 227.3 720 33.1
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 1.5e-55 221.9 729 32.6
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 3.4e-55 220.7 721 33.4
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 1.7e-54 218.4 716 33.8
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 2.2e-54 218.0 736 31.4
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 3.7e-54 217.2 711 35.7
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 8.3e-54 216.1 637 32.8
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 9.2e-53 212.6 572 38.5
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 9.2e-53 212.6 660 34.1
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 1.2e-52 212.2 675 33.9
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 4.6e-52 210.3 712 30.8
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 1.0e-51 209.1 736 34.2
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.3e-51 208.8 700 33.4
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 1.3e-51 208.8 692 33.7
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 2.3e-51 208.0 713 32.3
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 5.1e-51 206.8 659 35.8
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 7.3e-50 203.0 697 32.7
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 7.3e-50 203.0 731 33.2
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 7.3e-50 203.0 594 36.9
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 7.3e-50 203.0 678 33.0
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 2.8e-49 201.1 748 32.8
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.1e-48 199.1 665 35.6
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 1.4e-48 198.7 629 34.5
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 4.0e-48 197.2 699 33.8
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 5.2e-48 196.8 714 34.6
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 6.8e-48 196.4 638 33.7
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.5e-47 195.3 701 32.2
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 2.0e-47 194.9 660 35.5
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 3.4e-47 194.1 662 33.1
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 4.4e-47 193.7 727 31.6
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 7.6e-47 193.0 702 32.3
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 9.9e-47 192.6 736 32.3
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 1.3e-46 192.2 688 31.4
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 2.9e-46 191.0 631 32.0
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 3.7e-46 190.7 775 31.7
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 8.3e-46 189.5 565 36.3
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 8.3e-46 189.5 629 34.2
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 7.1e-45 186.4 659 33.8
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 7.1e-45 186.4 660 34.4
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.2e-44 185.7 708 32.3
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 1.6e-44 185.3 594 34.8
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 7.8e-44 183.0 635 33.4
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 1.7e-43 181.8 685 32.7
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 2.3e-43 181.4 757 30.0
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 3.9e-43 180.6 675 30.8
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 8.6e-43 179.5 601 34.9
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 1.9e-42 178.3 715 32.3
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 5.6e-42 176.8 716 32.3
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 1.6e-41 175.3 608 34.9
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 2.8e-41 174.5 569 33.7
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 4.7e-41 173.7 608 32.9
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 4.7e-41 173.7 545 35.6
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 8.1e-41 172.9 706 33.0
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.1e-40 172.6 567 33.2
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 3.1e-40 171.0 536 34.7
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 5.2e-40 170.2 712 29.6
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 6.8e-40 169.9 639 35.7
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 6.8e-40 169.9 740 30.4
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 2.6e-39 167.9 615 32.7
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 2.6e-39 167.9 748 31.3
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 2.2e-38 164.9 619 33.6
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 2.2e-38 164.9 506 36.8
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 1.4e-37 162.2 570 33.0
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 9.3e-37 159.5 572 31.1
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 3.0e-35 154.5 645 33.0
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 8.7e-35 152.9 685 30.2
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.1e-34 152.5 570 33.3
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 2.5e-34 151.4 703 28.7
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 1.3e-33 149.1 551 29.9
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 1.6e-33 148.7 691 29.5
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 6.2e-33 146.7 463 31.7
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 5.8e-31 140.2 501 32.5
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.7e-30 138.7 588 28.2
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 3.8e-30 137.5 621 31.1
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 8.4e-30 136.3 622 31.5
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 1.2e-28 132.5 646 31.3
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 1.7e-27 128.6 608 27.8
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 3.9e-27 127.5 461 29.7
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 8.7e-27 126.3 465 30.5
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 5.6e-26 123.6 614 32.4
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 5.6e-26 123.6 614 32.4
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 7.3e-26 123.2 623 32.7
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 9.6e-26 122.9 309 32.7
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 6.2e-25 120.2 593 31.5
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 1.4e-24 119.0 670 30.6
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 9.9e-23 112.8 665 30.1
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 9.9e-23 112.8 706 31.3
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 7.1e-21 106.7 623 31.9
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 9.3e-21 106.3 647 27.7
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 3.9e-19 100.9 625 26.2
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 1.9e-18 98.6 626 31.5
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 3.3e-18 97.8 656 25.2
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 4.3e-18 97.4 691 26.5
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 5.6e-18 97.1 621 29.5
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 6.9e-16 90.1 199 41.2
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.3e-14 85.9 617 29.8
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.9e-13 82.0 144 43.8
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 6.7e-11 73.6 153 43.8
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 6.7e-11 73.6 605 26.0
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.8e-08 65.5 362 35.4
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 7.6e-07 60.1 239 31.8


User provided reference genes

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