Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g042980 Amaranthus hybridus HOM05D000187 ORTHO05D000230 1.0e-51 206.5 104 100.0
Ah.11g042940 Amaranthus hybridus HOM05D000187 ORTHO05D000230 9.6e-34 146.7 139 58.3
AUR62038831 Chenopodium quinoa HOM05D000187 ORTHO05D000230 1.9e-26 122.5 137 51.1
AUR62042727 Chenopodium quinoa HOM05D000187 ORTHO05D000230 1.9e-26 122.5 137 51.8
EL10As7g23754 Beta vulgaris HOM05D000187 ORTHO05D000230 2.8e-25 118.6 137 52.6
Hund23937 Selenicereus undatus HOM05D000187 ORTHO05D000230 4.2e-21 104.8 136 46.3
Dinv39290 Davidia involucrata HOM05D000187 ORTHO05D000230 6.1e-20 100.9 136 44.9
Sc02g0007280 Simmondsia chinensis HOM05D000187 ORTHO05D000230 3.0e-19 98.6 134 44.0
Dinv35939 Davidia involucrata HOM05D000187 ORTHO05D000230 5.3e-16 87.8 136 40.4
Hma1.2p1_0360F.1_g135710 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 3.4e-15 85.1 132 39.4
CSS0010742 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D000230 1.9e-13 79.3 136 36.8
Rhsim06G0052700 Rhododendron simsii HOM05D000187 ORTHO05D000230 3.2e-13 78.6 136 38.2
TAR381G0132 Trochodendron aralioides HOM05D000187 ORTHO05D000230 2.1e-12 75.9 138 37.0
TAR625G0353 Trochodendron aralioides HOM05D000187 ORTHO05D000230 3.6e-12 75.1 138 39.1
Nn1g04799 Nelumbo nucifera HOM05D000187 ORTHO05D000230 6.1e-12 74.3 136 35.3
MD15G1079700 Malus domestica HOM05D000187 ORTHO05D000230 1.4e-11 73.2 140 37.1
TAR376G0642 Trochodendron aralioides HOM05D000187 ORTHO05D000230 3.0e-11 72.0 139 36.0
vmacro21501 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 3.0e-11 72.0 136 34.6
Aqoxy6G01277 Aquilegia oxysepala HOM05D000187 ORTHO05D000230 5.1e-11 71.2 137 35.0
Haze_10099 Corylus avellana HOM05D000187 ORTHO05D000230 8.8e-11 70.5 137 34.3
vmacro04442 Vaccinium macrocarpon HOM05D000187 ORTHO05D000230 8.8e-11 70.5 129 37.2
Oeu049993.1 Olea europaea HOM05D000187 ORTHO05D000230 1.1e-10 70.1 135 37.0
Oeu012954.1 Olea europaea HOM05D000187 ORTHO05D000230 2.0e-10 69.3 135 35.6
Cfa004537 Carpinus fangiana HOM05D003014 ORTHO05D003233 3.3e-10 68.6 137 33.6
Manes.18G039900 Manihot esculenta HOM05D000187 ORTHO05D000230 3.3e-10 68.6 137 35.8
QL02p004379 Quercus lobata HOM05D000187 ORTHO05D000230 3.3e-10 68.6 138 37.0
MD08G1097400 Malus domestica HOM05D000187 ORTHO05D000230 7.4e-10 67.4 140 35.7
Prupe.1G432700 Prunus persica HOM05D000187 ORTHO05D000230 7.4e-10 67.4 140 37.1
Thecc.02G103000 Theobroma cacao HOM05D000187 ORTHO05D000230 7.4e-10 67.4 138 34.8
Duzib248G1643 Durio zibethinus HOM05D000187 ORTHO05D000230 9.7e-10 67.0 138 35.5
Peaxi162Scf01027g00023 Petunia axillaris HOM05D000187 ORTHO05D000230 9.7e-10 67.0 133 34.6
MBI19_g14802_MAGBIO Magnolia biondii HOM05D000187 ORTHO05D000230 1.7e-09 66.2 137 34.3
Dinv15731 Davidia involucrata HOM05D000187 ORTHO05D000230 2.2e-09 65.9 132 35.6
QL11p034968 Quercus lobata HOM05D000187 ORTHO05D000230 2.2e-09 65.9 137 35.0
Lj4C61T9 Lonicera japonica HOM05D000187 ORTHO05D000230 3.7e-09 65.1 136 34.6
CiPaw.05G008000 Carya illinoinensis HOM05D000187 ORTHO05D000230 6.3e-09 64.3 137 32.1
ClCG08G016100 Citrullus lanatus HOM05D000187 ORTHO05D000230 6.3e-09 64.3 135 33.3
Actinidia22646 Actinidia chinensis HOM05D000187 ORTHO05D000230 8.2e-09 63.9 110 40.9
CiPaw.15G054500 Carya illinoinensis HOM05D000187 ORTHO05D000230 8.2e-09 63.9 136 35.3
Sc15g0005980 Simmondsia chinensis HOM05D000187 ORTHO05D000230 8.2e-09 63.9 121 38.8
Gohir.D13G040300 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.4e-08 63.2 138 36.2
Manes.18G039700 Manihot esculenta HOM05D000187 ORTHO05D000230 1.4e-08 63.2 138 35.5
MSTRG.1069 Avicennia marina HOM05D000187 ORTHO05D000230 1.8e-08 62.8 134 34.3
Gorai.008G024100 Gossypium raimondii HOM05D000187 ORTHO05D000230 2.4e-08 62.4 138 34.1
Gorai.013G045200 Gossypium raimondii HOM05D000187 ORTHO05D000230 2.4e-08 62.4 138 36.2
Nitab4.5_0006769g0060 Nicotiana tabacum HOM05D000187 ORTHO05D000230 2.4e-08 62.4 134 32.8
Rhsim07G0227200 Rhododendron simsii HOM05D000187 ORTHO05D000230 2.4e-08 62.4 130 33.1
CiPaw.16G040500 Carya illinoinensis HOM05D000187 ORTHO05D000230 4.1e-08 61.6 136 35.3
Nitab4.5_0000287g0070 Nicotiana tabacum HOM05D000187 ORTHO05D000230 4.1e-08 61.6 134 32.8
CiPaw.06G171600 Carya illinoinensis HOM05D000187 ORTHO05D000230 5.3e-08 61.2 137 34.3
MELO3C010842.2 Cucumis melo HOM05D000187 ORTHO05D000230 5.3e-08 61.2 135 31.9
MSTRG.25076 Avicennia marina HOM05D000187 ORTHO05D000230 6.9e-08 60.8 134 34.3
Haze_18037 Corylus avellana HOM05D000187 ORTHO05D000230 6.9e-08 60.8 134 34.3
Cc10_g04640 Coffea canephora HOM05D000187 ORTHO05D000230 9.1e-08 60.5 136 36.0
COL.COLO4_32635 Corchorus olitorius HOM05D000187 ORTHO05D000230 9.1e-08 60.5 132 36.4
Sabra02G0097600 Salix brachista HOM05D000187 ORTHO05D000230 9.1e-08 60.5 136 33.1
Sed0014852 Sechium edule HOM05D000187 ORTHO05D000230 9.1e-08 60.5 135 31.1
Solyc04g078680.4 Solanum lycopersicum HOM05D000187 ORTHO05D000230 9.1e-08 60.5 133 30.8
Sopen04g032280 Solanum pennellii HOM05D000187 ORTHO05D000230 9.1e-08 60.5 133 30.8
CsaV3_2G026530 Cucumis sativus L. HOM05D000187 ORTHO05D000230 1.2e-07 60.1 135 31.9
Duzib132G0227 Durio zibethinus HOM05D000187 ORTHO05D000230 1.2e-07 60.1 137 35.0
Gohir.A13G041600 Gossypium hirsutum HOM05D000187 ORTHO05D000230 1.2e-07 60.1 138 34.8
Dinv42168 Davidia involucrata HOM05D000187 ORTHO05D000230 1.5e-07 59.7 132 35.6
Cfa018070 Carpinus fangiana HOM05D000187 ORTHO05D000230 2.0e-07 59.3 133 33.8
Potri.002G124300 Populus trichocarpa HOM05D000187 ORTHO05D000230 2.6e-07 58.9 140 30.7
RcHm_v2.0_Chr6g0257951 Rosa chinensis HOM05D000187 ORTHO05D000230 3.4e-07 58.5 136 35.3
PGSC0003DMG400007954 Solanum tuberosum HOM05D000187 ORTHO05D000230 3.4e-07 58.5 133 30.1
TWI31G1329 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 3.4e-07 58.5 135 34.8
Cpa.g.sc21.175 Carica papaya HOM05D000187 ORTHO05D000230 4.5e-07 58.2 139 30.9
Gohir.D12G023700 Gossypium hirsutum HOM05D000187 ORTHO05D000230 4.5e-07 58.2 138 34.8
Oeu057264.1 Olea europaea HOM05D000187 ORTHO05D000230 4.5e-07 58.2 134 33.6
MSTRG.24354 Avicennia marina HOM05D000187 ORTHO05D000230 1.0e-06 57.0 134 33.6
Hma1.2p1_1072F.1_g254190 Hydrangea macrophylla HOM05D000187 ORTHO05D000230 1.0e-06 57.0 133 29.3
TAR628G0833 Trochodendron aralioides HOM05D000187 ORTHO05D000230 1.0e-06 57.0 126 33.3
CANSAT25G2996 Cannabis sativa HOM05D000187 ORTHO05D000230 1.3e-06 56.6 138 32.6
TWI36G1439 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 1.3e-06 56.6 76 43.4
FAN24G2043 Fragaria x ananassa HOM05D000187 ORTHO05D000230 1.7e-06 56.2 133 31.6
Peaxi162Scf00016g02027 Petunia axillaris HOM05D000187 ORTHO05D000230 1.7e-06 56.2 85 40.0
Duzib041G0535 Durio zibethinus HOM05D000187 ORTHO05D000230 2.2e-06 55.8 138 33.3
MD00G1050100 Malus domestica HOM05D000187 ORTHO05D000230 2.9e-06 55.5 132 32.6
Oeu021388.1 Olea europaea HOM05D000187 ORTHO05D000230 2.9e-06 55.5 134 32.8
Peaxi162Scf00503g00314 Petunia axillaris HOM05D000187 ORTHO05D000230 2.9e-06 55.5 131 33.6
Atru.chr13.725 Acer truncatum HOM05D000187 ORTHO05D000230 3.8e-06 55.1 141 31.2
Actinidia01095 Actinidia chinensis HOM05D000187 ORTHO05D000230 3.8e-06 55.1 89 41.6
Duzib093G1398 Durio zibethinus HOM05D000187 ORTHO05D000230 5.0e-06 54.7 138 32.6
FvH4_2g05790 Fragaria vesca HOM05D000187 ORTHO05D000230 5.0e-06 54.7 133 32.3
FAN20G1867 Fragaria x ananassa HOM05D000187 ORTHO05D000230 5.0e-06 54.7 133 30.8
FAN27G1863 Fragaria x ananassa HOM05D000187 ORTHO05D000230 5.0e-06 54.7 133 30.8
Thecc.08G003700 Theobroma cacao HOM05D000187 ORTHO05D000230 5.0e-06 54.7 138 31.2
Sed0004383 Sechium edule HOM05D000187 ORTHO05D000230 6.5e-06 54.3 135 33.3
TWI75G1870 Tripterygium wilfordii HOM05D000187 ORTHO05D000230 6.5e-06 54.3 138 31.9


User provided reference genes

Program Settings