Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g042380 Amaranthus hybridus HOM05D000003 ORTHO05D000006 2.3e-167 592.0 282 100.0
Ah.07g200070 Amaranthus hybridus HOM05D000003 ORTHO05D000007 7.3e-52 208.4 253 47.0
Ah.11g041420 Amaranthus hybridus HOM05D000003 ORTHO05D000006 6.6e-29 132.1 211 42.7
Ah.10g026680 Amaranthus hybridus HOM05D000003 ORTHO05D000004 2.4e-23 113.6 233 29.6
Ah.06g186620 Amaranthus hybridus HOM05D000024 ORTHO05D000006 2.3e-21 107.1 122 46.7
Aqoxy3G01612 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-17 94.7 213 28.6
Aqoxy3G02413 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.0e-16 91.7 206 27.2
Sopen00g006870 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-16 91.3 220 28.2
Hund22672 Selenicereus undatus HOM05D000003 ORTHO05D000006 1.7e-16 90.9 190 25.3
Sopen00g009000 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-16 90.1 210 27.6
Sopen12g011700 Solanum pennellii HOM05D000003 ORTHO05D000004 8.4e-16 88.6 201 29.4
vmacro08911 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 8.4e-16 88.6 209 26.3
Sopen00g010970 Solanum pennellii HOM05D000003 ORTHO05D000006 1.1e-15 88.2 194 29.9
Ah.02g118420 Amaranthus hybridus HOM05D000003 ORTHO05D000006 7.1e-15 85.5 125 38.4
HanXRQChr03g0079511 Helianthus annuus HOM05D000003 ORTHO05D000004 7.1e-15 85.5 209 28.7
Nitab4.5_0007744g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000006 1.6e-14 84.3 194 28.4
Sopen10g008120 Solanum pennellii HOM05D000003 ORTHO05D000004 3.5e-14 83.2 201 28.9
Ah.01g011890 Amaranthus hybridus HOM05D000003 ORTHO05D000006 6.0e-14 82.4 125 36.0
Ah.02g118390 Amaranthus hybridus HOM05D000003 ORTHO05D000006 1.0e-13 81.6 125 36.0
Ah.10g027070 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.8e-13 80.9 257 28.8
Sopen00g009820 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-13 80.1 174 27.6
Sopen00g004730 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-12 77.8 174 27.0
Sopen00g009650 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-12 77.4 182 26.9
Sopen05g020920 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-12 77.0 157 28.7
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 3.3e-12 76.6 183 27.3
Sopen00g004660 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-12 76.3 157 28.7
Sopen00g005560 Solanum pennellii HOM05D000003 ORTHO05D000006 4.3e-12 76.3 174 27.6
Sopen00g008350 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-12 76.3 178 28.7
Sopen00g010250 Solanum pennellii HOM05D000003 ORTHO05D000004 4.3e-12 76.3 172 29.7
FvH4_2g05131 Fragaria vesca HOM05D000003 ORTHO05D000006 5.7e-12 75.9 165 30.9
Sopen00g008680 Solanum pennellii HOM05D000003 ORTHO05D000004 7.4e-12 75.5 173 29.5
Sopen00g006710 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-11 74.7 173 28.9
Sopen00g009450 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-11 74.7 174 27.6
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.6e-11 74.3 216 26.9
Aqoxy5G03315 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.7e-11 73.2 217 25.8
Rhsim04G0152900 Rhododendron simsii HOM05D000003 ORTHO05D000007 3.7e-11 73.2 207 22.2
Sopen00g008000 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-11 72.8 174 27.0
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 4.8e-11 72.8 189 25.4
Oeu036332.1 Olea europaea HOM05D000003 ORTHO05D000006 6.3e-11 72.4 206 24.8
Sopen00g011080 Solanum pennellii HOM05D000003 ORTHO05D000006 6.3e-11 72.4 174 26.4
Sabra09G0000100 Salix brachista HOM05D000003 ORTHO05D000283 1.1e-10 71.6 159 27.0
Sopen00g004670 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-10 71.6 174 27.6
Sabra02G0035400 Salix brachista HOM05D000003 ORTHO05D000007 1.8e-10 70.9 154 27.3
Sopen05g013420 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-10 70.9 174 27.6
Oeu038020.4 Olea europaea HOM05D000003 ORTHO05D000006 2.4e-10 70.5 207 25.6
CANSAT54G2584 Cannabis sativa HOM05D000003 ORTHO05D000006 3.1e-10 70.1 190 25.8
Sabra18G0071500 Salix brachista HOM05D000003 ORTHO05D000006 4.1e-10 69.7 154 27.3
Sopen00g007130 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-10 69.7 178 27.0
Oeu008160.1 Olea europaea HOM05D000003 ORTHO05D000006 5.3e-10 69.3 207 27.1
Psat4g187720 Pisum sativum HOM05D000003 ORTHO05D000006 5.3e-10 69.3 201 23.4
Oeu002445.1 Olea europaea HOM05D000003 ORTHO05D000006 6.9e-10 68.9 205 23.4
Oeu041654.1 Olea europaea HOM05D000003 ORTHO05D000006 6.9e-10 68.9 205 24.9
Sabra16G0042000 Salix brachista HOM05D000003 ORTHO05D000007 6.9e-10 68.9 107 34.6
Hund04109 Selenicereus undatus HOM05D018245 ORTHO05D000006 9.0e-10 68.6 203 23.2
Hund10220 Selenicereus undatus HOM05D000003 ORTHO05D000007 9.0e-10 68.6 203 23.6
Sopen00g012830 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-09 68.2 157 27.4
CANSAT42G0001 Cannabis sativa HOM05D000003 ORTHO05D000006 2.6e-09 67.0 199 25.6
Sabra04G0086900 Salix brachista HOM05D000003 ORTHO05D000007 2.6e-09 67.0 195 24.1
Sopen00g010500 Solanum pennellii HOM05D000003 ORTHO05D000004 2.6e-09 67.0 158 26.6
Aqoxy7G02651 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.4e-09 66.6 199 27.1
Sabra11G0094500 Salix brachista HOM05D000003 ORTHO05D000283 3.4e-09 66.6 136 27.9
Sabra11G0094800 Salix brachista HOM05D000054 ORTHO05D000283 3.4e-09 66.6 136 27.9
SHI27425 Sapria himalayana HOM05D000003 ORTHO05D000004 3.4e-09 66.6 202 25.7
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 4.5e-09 66.2 194 26.8
THA.LOC104820714 Tarenaya hassleriana HOM05D000003 ORTHO05D000006 4.5e-09 66.2 207 26.1
CANSAT80G2638 Cannabis sativa HOM05D000003 ORTHO05D000006 5.9e-09 65.9 179 24.6
Dinv42653 Davidia involucrata HOM05D000003 ORTHO05D000006 5.9e-09 65.9 187 25.1
Sabra11G0062400 Salix brachista HOM05D000003 ORTHO05D000283 5.9e-09 65.9 116 28.4
Sopen04g018170 Solanum pennellii HOM05D000003 ORTHO05D000004 5.9e-09 65.9 157 27.4
PSO170G0824 Papaver somniferum HOM05D000003 ORTHO05D000004 7.6e-09 65.5 183 28.4
Sabra04G0111000 Salix brachista HOM05D000003 ORTHO05D000007 7.6e-09 65.5 138 28.3
Ah.12g063160 Amaranthus hybridus HOM05D000003 ORTHO05D060662 1.0e-08 65.1 71 40.8
Dinv31250 Davidia involucrata HOM05D000003 ORTHO05D000006 1.0e-08 65.1 238 21.8
SHI32979 Sapria himalayana HOM05D000003 ORTHO05D000006 1.0e-08 65.1 202 25.2
Sopen08g014400 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-08 65.1 157 26.8
THA.LOC104822217 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.0e-08 65.1 207 25.6
Atru.chr5.1993 Acer truncatum HOM05D000003 ORTHO05D000006 1.3e-08 64.7 115 30.4
CANSAT21G0660 Cannabis sativa HOM05D000003 ORTHO05D000006 1.3e-08 64.7 143 31.5
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 1.7e-08 64.3 158 29.1
Peaxi162Scf01097g00411 Petunia axillaris HOM05D000003 ORTHO05D000006 1.7e-08 64.3 168 26.2
Sabra12G0054600 Salix brachista HOM05D000003 ORTHO05D000006 1.7e-08 64.3 164 26.8
Hund30059 Selenicereus undatus HOM05D000003 ORTHO05D000006 1.7e-08 64.3 123 28.5
CANSAT21G0612 Cannabis sativa HOM05D000003 ORTHO05D000006 2.2e-08 63.9 206 23.8
CANSAT65G0001 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-08 63.9 199 25.6
Oeu001541.1 Olea europaea HOM05D000003 ORTHO05D000006 2.2e-08 63.9 200 25.0
Oeu046474.1 Olea europaea HOM05D000003 ORTHO05D000006 2.2e-08 63.9 156 27.6
Potri.014G186733 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.2e-08 63.9 163 25.8
Sabra18G0006200 Salix brachista HOM05D000003 ORTHO05D000007 2.2e-08 63.9 136 27.2
Sabra18G0008200 Salix brachista HOM05D000003 ORTHO05D000007 2.2e-08 63.9 136 27.2
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-08 63.9 140 27.1
Potri.014G186236 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.9e-08 63.5 178 25.3
Sabra10G0196600 Salix brachista HOM05D000003 ORTHO05D000006 2.9e-08 63.5 138 29.0
SHI25412 Sapria himalayana HOM05D000003 ORTHO05D000004 2.9e-08 63.5 200 24.0
Sopen00g004600 Solanum pennellii HOM05D000003 ORTHO05D000004 2.9e-08 63.5 140 27.1
ECA238G3988 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.8e-08 63.2 194 22.2
Oeu026100.1 Olea europaea HOM05D000003 ORTHO05D000006 3.8e-08 63.2 199 24.1
Sabra13G0081900 Salix brachista HOM05D000003 ORTHO05D000006 3.8e-08 63.2 201 23.9
PSO384G2976 Papaver somniferum HOM05D000003 ORTHO05D000006 5.0e-08 62.8 162 28.4
ECA247G2259 Erigeron canadensis HOM05D000003 ORTHO05D000004 6.5e-08 62.4 155 25.2
Sabra01G0181200 Salix brachista HOM05D000003 ORTHO05D000007 6.5e-08 62.4 83 33.7
Sabra13G0066800 Salix brachista HOM05D000003 ORTHO05D000006 6.5e-08 62.4 185 23.2
BolC9t58036H Brassica oleracea HOM05D000003 ORTHO05D000007 1.1e-07 61.6 147 29.3
CANSAT80G2238 Cannabis sativa HOM05D000003 ORTHO05D000006 1.1e-07 61.6 200 22.5
Sabra12G0001700 Salix brachista HOM05D000003 ORTHO05D000006 1.1e-07 61.6 208 22.6
Sabra16G0124300 Salix brachista HOM05D000003 ORTHO05D000006 1.1e-07 61.6 189 23.8
SHI49151 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-07 61.6 195 24.1
Sabra02G0000100 Salix brachista HOM05D000003 ORTHO05D000006 1.4e-07 61.2 123 31.7
Sabra12G0047400 Salix brachista HOM05D000003 ORTHO05D000006 1.4e-07 61.2 68 36.8
SHI14472 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-07 61.2 195 24.1
vmacro20718 Vaccinium macrocarpon HOM05D000549 ORTHO05D001527 1.4e-07 61.2 74 40.5
BcaC01g05180 Brassica carinata HOM05D000003 ORTHO05D000007 1.9e-07 60.8 133 29.3
A03p52160 Brassica napus HOM05D000003 ORTHO05D000007 1.9e-07 60.8 145 26.9
Oeu057028.1 Olea europaea HOM05D000003 ORTHO05D000006 1.9e-07 60.8 136 30.1
SHI27543 Sapria himalayana HOM05D000003 ORTHO05D000004 2.5e-07 60.5 203 24.1
CANSAT11G0666 Cannabis sativa HOM05D000003 ORTHO05D000006 3.2e-07 60.1 204 25.5
Oeu014514.1 Olea europaea HOM05D000003 ORTHO05D000006 3.2e-07 60.1 148 26.4
Sabra04G0116100 Salix brachista HOM05D000003 ORTHO05D000283 4.2e-07 59.7 96 28.1
Nitab4.5_0000752g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000283 5.5e-07 59.3 99 30.3
Sabra19G0073100 Salix brachista HOM05D000003 ORTHO05D000006 5.5e-07 59.3 117 30.8
CANSAT11G1048 Cannabis sativa HOM05D000003 ORTHO05D000006 7.2e-07 58.9 149 24.8
Dinv01133 Davidia involucrata HOM05D000003 ORTHO05D000007 7.2e-07 58.9 139 24.5
HanXRQChr13g0389391 Helianthus annuus HOM05D000003 ORTHO05D000004 7.2e-07 58.9 201 21.9
Oeu024120.1 Olea europaea HOM05D000003 ORTHO05D000006 7.2e-07 58.9 122 25.4
Atru.chr5.2069 Acer truncatum HOM05D000003 ORTHO05D000004 9.3e-07 58.5 86 32.6
CANSAT35G1839 Cannabis sativa HOM05D000024 ORTHO05D000006 9.3e-07 58.5 199 23.1
Potri.013G100901 Populus trichocarpa HOM05D000003 ORTHO05D000006 9.3e-07 58.5 176 23.9
Sabra13G0062800 Salix brachista HOM05D000003 ORTHO05D000006 9.3e-07 58.5 208 22.1
Sabra16G0322000 Salix brachista HOM05D000003 ORTHO05D000007 9.3e-07 58.5 107 29.9
Sopen12g013630 Solanum pennellii HOM05D000003 ORTHO05D000004 9.3e-07 58.5 139 28.1
CANSAT25G0109 Cannabis sativa HOM05D000003 ORTHO05D000006 1.2e-06 58.2 207 23.7
CANSAT25G3393 Cannabis sativa HOM05D000024 ORTHO05D000006 1.2e-06 58.2 199 24.1
Oeu024829.1 Olea europaea HOM05D000003 ORTHO05D000006 1.6e-06 57.8 148 25.7
Aqoxy7G02314 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.1e-06 57.4 170 27.6
Atru.chr2.1780 Acer truncatum HOM05D000003 ORTHO05D000004 2.7e-06 57.0 89 32.6
ECA234G0059 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.7e-06 57.0 201 22.4
Oeu013393.1 Olea europaea HOM05D000003 ORTHO05D000006 2.7e-06 57.0 85 37.6
Sabra04G0097700 Salix brachista HOM05D000003 ORTHO05D000283 2.7e-06 57.0 155 27.1
Atru.chr2.1779 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-06 56.6 101 31.7
BraA01t03255Z Brassica rapa HOM05D000003 ORTHO05D000007 3.5e-06 56.6 147 28.6
Sabra13G0117700 Salix brachista HOM05D000003 ORTHO05D000006 3.5e-06 56.6 121 28.9
Sabra09G0011200 Salix brachista HOM05D000003 ORTHO05D000006 4.6e-06 56.2 122 27.9
vmacro17798 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 4.6e-06 56.2 73 39.7
CANSAT80G0416 Cannabis sativa HOM05D000003 ORTHO05D000004 6.1e-06 55.8 145 25.5
Oeu000130.1 Olea europaea HOM05D000003 ORTHO05D000006 6.1e-06 55.8 126 25.4
Sabra06G0129400 Salix brachista HOM05D000003 ORTHO05D000006 6.1e-06 55.8 121 28.9
SHI33828 Sapria himalayana HOM05D000003 ORTHO05D000004 6.1e-06 55.8 203 21.2
BcaC02g09582 Brassica carinata HOM05D000003 ORTHO05D000007 7.9e-06 55.5 143 30.1
Dinv16490 Davidia involucrata HOM05D000003 ORTHO05D000007 7.9e-06 55.5 116 27.6
PGSC0003DMG400046562 Solanum tuberosum HOM05D000003 ORTHO05D000006 7.9e-06 55.5 150 28.7


User provided reference genes

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