Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 1.9e-50 202.2 100 100.0
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 4.9e-43 177.6 96 85.4
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 9.5e-39 163.3 98 82.7
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 9.5e-39 163.3 98 82.7
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 1.4e-37 159.5 98 79.6
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 4.0e-37 157.9 92 81.5
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 5.2e-37 157.5 98 81.6
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 6.8e-37 157.1 98 81.6
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 1.5e-36 156.0 92 80.4
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 2.0e-36 155.6 98 76.5
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.4e-36 154.5 98 76.5
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 4.4e-36 154.5 95 78.9
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 4.4e-36 154.5 96 78.1
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 5.8e-36 154.1 98 76.5
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 9.9e-36 153.3 98 75.5
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 1.3e-35 152.9 98 75.5
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 1.3e-35 152.9 98 74.5
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.3e-35 152.9 98 75.5
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 2.2e-35 152.1 94 76.6
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 2.2e-35 152.1 99 75.8
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 2.2e-35 152.1 98 72.4
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 2.9e-35 151.8 96 76.0
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.8e-35 151.4 96 76.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 3.8e-35 151.4 98 74.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 4.9e-35 151.0 98 74.5
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 6.4e-35 150.6 94 79.8
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.1e-34 149.8 94 77.7
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.1e-34 149.8 96 74.0
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 1.4e-34 149.4 96 75.0
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.9e-34 149.1 98 73.5
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 5.4e-34 147.5 96 74.0
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 5.4e-34 147.5 96 72.9
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 7.1e-34 147.1 97 69.1
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 9.2e-34 146.7 98 72.4
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 9.2e-34 146.7 98 72.4
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 1.6e-33 146.0 98 70.4
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 2.1e-33 145.6 100 72.0
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 2.1e-33 145.6 100 71.0
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 2.7e-33 145.2 94 73.4
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 2.7e-33 145.2 93 73.1
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 3.5e-33 144.8 96 71.9
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 3.5e-33 144.8 95 76.8
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 3.5e-33 144.8 98 70.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 4.6e-33 144.4 96 74.0
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 6.0e-33 144.1 100 72.0
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 6.0e-33 144.1 96 72.9
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 6.0e-33 144.1 100 68.0
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.0e-33 144.1 100 68.0
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.0e-33 144.1 100 68.0
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 6.0e-33 144.1 94 73.4
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 1.0e-32 143.3 87 77.0
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 1.3e-32 142.9 98 72.4
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 1.3e-32 142.9 98 69.4
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.3e-32 142.9 96 69.8
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 1.3e-32 142.9 96 69.8
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 1.3e-32 142.9 96 69.8
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.3e-32 142.1 100 68.0
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 3.0e-32 141.7 92 73.9
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 3.9e-32 141.4 98 70.4
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 5.1e-32 141.0 87 75.9
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 8.7e-32 140.2 92 73.9
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 8.7e-32 140.2 92 72.8
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.9e-31 139.0 91 70.3
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 1.9e-31 139.0 91 74.7
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 2.5e-31 138.7 92 72.8
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 2.5e-31 138.7 92 72.8
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 2.5e-31 138.7 92 72.8
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 2.5e-31 138.7 92 72.8
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 4.3e-31 137.9 92 70.7
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 5.6e-31 137.5 92 71.7
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 5.6e-31 137.5 96 70.8
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 1.3e-30 136.3 92 71.7
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 1.6e-30 136.0 98 65.3
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 1.6e-30 136.0 96 68.8
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 2.1e-30 135.6 98 64.3
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 4.8e-30 134.4 96 68.8
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 4.8e-30 134.4 101 65.3
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 6.2e-30 134.0 95 70.5
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 6.2e-30 134.0 95 70.5
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 6.2e-30 134.0 92 69.6
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 8.1e-30 133.7 95 70.5
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 8.1e-30 133.7 92 68.5
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 8.1e-30 133.7 121 60.3
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.1e-29 133.3 81 76.5
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-29 132.9 95 70.5
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 1.4e-29 132.9 95 70.5
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 1.4e-29 132.9 93 73.1
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 1.8e-29 132.5 92 69.6
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 3.1e-29 131.7 100 65.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 4.0e-29 131.3 95 69.5
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 5.3e-29 131.0 92 67.4
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 6.9e-29 130.6 90 68.9
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.2e-28 129.8 97 68.0
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 1.5e-28 129.4 94 70.2
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 2.0e-28 129.0 98 64.3
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 3.4e-28 128.3 81 74.1
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 4.4e-28 127.9 81 76.5
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 9.9e-28 126.7 103 65.0
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 3.8e-27 124.8 96 64.6
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 4.9e-27 124.4 77 79.2
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 6.4e-27 124.0 83 77.1
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 1.9e-26 122.5 78 78.2
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 4.6e-25 117.9 85 64.7
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 1.1e-23 113.2 82 68.3
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 6.2e-22 107.5 63 81.0
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.6e-20 102.1 103 55.3
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 2.2e-19 99.0 89 58.4
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 4.9e-19 97.8 84 63.1
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 2.1e-17 92.4 73 60.3
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 1.8e-16 89.4 94 50.0
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 1.6e-14 82.8 44 88.6
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.6e-14 82.8 85 48.2
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.2e-12 76.6 108 46.3
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 2.9e-11 72.0 90 45.6
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.4e-10 69.7 60 56.7
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.9e-10 69.3 42 71.4
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 2.7e-09 65.5 78 44.9
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 3.9e-08 61.6 37 70.3
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 8.2e-06 53.9 47 53.2


User provided reference genes

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