Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 2.1e-103 379.0 194 100.0
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.1e-54 217.2 268 53.0
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 2.0e-53 213.0 263 54.0
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 4.7e-50 201.8 272 50.7
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 7.5e-48 194.5 136 71.3
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 4.6e-45 185.3 132 67.4
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 3.9e-44 182.2 131 67.9
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 5.0e-44 181.8 132 69.7
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 8.6e-44 181.0 130 66.9
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 8.6e-44 181.0 130 70.0
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 8.6e-44 181.0 130 70.0
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 8.6e-44 181.0 133 66.9
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 1.1e-43 180.6 135 68.9
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.9e-43 179.9 130 69.2
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 3.3e-43 179.1 132 66.7
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 4.3e-43 178.7 230 47.4
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 4.3e-43 178.7 132 66.7
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 9.5e-43 177.6 134 68.7
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 1.2e-42 177.2 136 63.2
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 1.2e-42 177.2 134 65.7
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 2.8e-42 176.0 192 51.6
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 2.8e-42 176.0 134 65.7
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 2.8e-42 176.0 134 65.7
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 4.7e-42 175.3 133 65.4
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 4.7e-42 175.3 132 67.4
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 6.2e-42 174.9 127 66.1
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 6.2e-42 174.9 133 65.4
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 8.0e-42 174.5 132 66.7
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.0e-41 174.1 204 50.0
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 1.4e-41 173.7 135 64.4
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.8e-41 173.3 248 47.2
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.8e-41 173.3 133 66.9
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.8e-41 173.3 132 64.4
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 3.1e-41 172.6 136 64.0
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 3.1e-41 172.6 189 50.8
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 3.1e-41 172.6 132 65.2
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 4.0e-41 172.2 136 64.7
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 5.2e-41 171.8 133 64.7
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 5.2e-41 171.8 133 65.4
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 5.2e-41 171.8 132 64.4
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 5.2e-41 171.8 188 51.1
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 5.2e-41 171.8 132 64.4
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 5.2e-41 171.8 136 64.0
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 6.8e-41 171.4 132 65.9
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 6.8e-41 171.4 137 62.8
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 1.2e-40 170.6 134 63.4
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.5e-40 170.2 136 64.0
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 2.0e-40 169.9 127 66.1
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 2.6e-40 169.5 133 63.2
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 3.4e-40 169.1 133 61.7
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 5.8e-40 168.3 134 61.2
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 5.8e-40 168.3 132 62.1
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 7.5e-40 167.9 134 60.4
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 7.5e-40 167.9 127 66.9
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 9.8e-40 167.5 137 65.0
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 9.8e-40 167.5 134 62.7
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.7e-39 166.8 237 43.5
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.7e-39 166.8 179 52.5
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.7e-39 166.8 204 48.5
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 1.7e-39 166.8 134 63.4
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.2e-39 166.4 132 61.4
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 2.9e-39 166.0 132 61.4
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 3.7e-39 165.6 132 60.6
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 3.7e-39 165.6 132 60.6
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 4.9e-39 165.2 132 59.1
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 4.9e-39 165.2 134 64.2
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 6.4e-39 164.9 134 62.7
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 8.3e-39 164.5 132 59.1
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 8.3e-39 164.5 134 59.7
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.4e-38 163.7 127 64.6
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.4e-38 163.7 134 61.9
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 1.4e-38 163.7 134 61.2
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 1.9e-38 163.3 130 64.6
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 1.9e-38 163.3 132 61.4
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 5.4e-38 161.8 145 57.9
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 5.4e-38 161.8 130 63.8
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 5.4e-38 161.8 133 59.4
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 7.0e-38 161.4 146 57.5
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 7.0e-38 161.4 134 60.4
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 7.0e-38 161.4 134 60.4
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 9.2e-38 161.0 128 61.7
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 9.2e-38 161.0 127 63.8
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 9.2e-38 161.0 134 59.7
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 9.2e-38 161.0 134 60.4
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 7.8e-37 157.9 134 58.2
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 2.3e-36 156.4 126 59.5
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 6.6e-36 154.8 127 60.6
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 8.6e-36 154.5 137 58.4
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 2.5e-35 152.9 242 42.6
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 5.6e-35 151.8 114 66.7
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 7.3e-35 151.4 129 57.4
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 9.5e-35 151.0 133 56.4
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 2.8e-34 149.4 112 67.9
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 8.1e-34 147.9 221 42.5
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 1.5e-32 143.7 144 55.6
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.3e-31 140.6 126 57.1
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 1.7e-31 140.2 195 40.5
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 5.4e-30 135.2 164 44.5
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.7e-28 130.2 132 52.3
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 3.3e-27 125.9 133 47.4
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 3.1e-25 119.4 238 34.5
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 3.8e-23 112.5 111 49.5
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 5.1e-20 102.1 133 37.6
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 7.3e-19 98.2 135 37.8
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 3.4e-16 89.4 52 82.7
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.3e-12 77.4 152 30.9
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.3e-12 76.6 55 67.3
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 9.6e-11 71.2 38 76.3
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.0e-09 65.9 48 68.8
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 2.6e-08 63.2 131 30.5
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-07 59.7 53 58.5
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 8.4e-07 58.2 127 31.5


User provided reference genes

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