Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 3.2e-102 375.2 199 100.0
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 7.4e-59 231.1 203 68.5
AUR62040795 Chenopodium quinoa HOM05D005571 ORTHO05D006919 8.5e-55 217.6 208 62.0
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 9.4e-46 187.6 202 56.4
AUR62036861 Chenopodium quinoa HOM05D005571 ORTHO05D006919 5.2e-36 155.2 208 48.6
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 6.3e-34 148.3 208 49.0
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 3.1e-33 146.0 211 48.3
Sc02g0009100 Simmondsia chinensis HOM05D005571 ORTHO05D006919 3.1e-33 146.0 209 50.7
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 2.2e-31 139.8 189 49.2
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 2.1e-29 133.3 207 47.3
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 2.8e-29 132.9 202 44.6
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 2.8e-29 132.9 215 45.6
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 6.1e-29 131.7 188 49.5
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 8.0e-29 131.3 208 45.7
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 8.0e-29 131.3 209 47.4
MSTRG.977 Avicennia marina HOM05D005571 ORTHO05D006919 1.4e-28 130.6 207 44.0
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 2.3e-28 129.8 211 46.4
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 1.2e-27 127.5 218 41.7
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 1.5e-27 127.1 215 43.3
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.5e-27 127.1 187 45.5
Hund05103 Selenicereus undatus HOM05D001348 ORTHO05D002788 2.6e-27 126.3 207 46.4
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.4e-27 125.9 213 45.1
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 3.4e-27 125.9 210 47.1
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 4.4e-27 125.6 208 43.8
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 4.4e-27 125.6 213 43.7
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 7.5e-27 124.8 211 45.5
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 9.8e-27 124.4 193 46.1
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 9.8e-27 124.4 215 43.7
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.3e-26 124.0 202 42.1
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 1.3e-26 124.0 203 46.8
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 2.2e-26 123.2 205 44.9
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 2.8e-26 122.9 215 43.3
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 3.7e-26 122.5 188 45.7
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 3.7e-26 122.5 186 47.3
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 4.9e-26 122.1 188 47.9
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 4.9e-26 122.1 194 44.8
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 8.3e-26 121.3 211 44.5
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 1.8e-25 120.2 190 48.9
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 1.8e-25 120.2 208 43.8
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 2.4e-25 119.8 204 44.6
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 2.4e-25 119.8 208 44.7
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 4.1e-25 119.0 211 39.8
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 5.4e-25 118.6 189 46.6
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 7.0e-25 118.2 211 43.6
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.2e-24 117.5 195 45.1
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 2.0e-24 116.7 212 46.2
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 2.7e-24 116.3 210 42.9
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 4.5e-24 115.5 187 43.9
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 5.9e-24 115.2 207 43.0
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 1.3e-23 114.0 218 40.8
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.3e-23 114.0 220 43.2
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.3e-23 114.0 221 44.3
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 1.3e-23 114.0 221 44.3
Gohir.D02G100200 Gossypium hirsutum HOM05D005571 ORTHO05D006919 1.7e-23 113.6 200 44.5
Gorai.005G113600 Gossypium raimondii HOM05D005571 ORTHO05D006919 2.3e-23 113.2 200 44.5
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 6.6e-23 111.7 217 40.6
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 1.1e-22 110.9 210 39.0
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 1.9e-22 110.2 189 41.8
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 3.3e-22 109.4 199 41.7
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 3.3e-22 109.4 209 41.6
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 4.3e-22 109.0 226 43.4
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 7.3e-22 108.2 214 42.1
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 9.5e-22 107.8 216 38.4
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.2e-21 107.5 211 41.2
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.1e-21 106.7 196 39.3
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 3.6e-21 105.9 180 44.4
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 4.7e-21 105.5 204 40.7
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 6.1e-21 105.1 190 44.2
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 2.3e-20 103.2 150 42.7
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 6.8e-20 101.7 213 41.8
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 8.9e-20 101.3 188 42.6
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.9e-20 101.3 188 44.7
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 8.9e-20 101.3 213 41.8
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 8.9e-20 101.3 220 36.8
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 2.0e-19 100.1 208 40.9
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 9.8e-19 97.8 201 39.8
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 9.8e-19 97.8 218 38.1
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 1.3e-18 97.4 204 42.2
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 2.9e-18 96.3 188 40.4
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 3.7e-18 95.9 209 40.7
Carub.0008s0685 Capsella rubella HOM05D005571 ORTHO05D006919 3.7e-18 95.9 200 39.0
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 4.9e-18 95.5 209 39.2
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 4.9e-18 95.5 216 38.4
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 4.9e-18 95.5 218 41.3
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 4.9e-18 95.5 203 40.4
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 6.4e-18 95.1 218 40.8
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 8.3e-18 94.7 213 34.7
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 8.3e-18 94.7 205 38.5
BcaB01g05139 Brassica carinata HOM05D005571 ORTHO05D006919 1.8e-17 93.6 192 41.7
C03p11000 Brassica napus HOM05D005571 ORTHO05D006919 1.8e-17 93.6 192 41.7
BolC3t13569H Brassica oleracea HOM05D005571 ORTHO05D006919 1.8e-17 93.6 193 42.0
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 4.1e-17 92.4 216 37.0
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 4.1e-17 92.4 202 39.1
CANSAT25G0564 Cannabis sativa HOM05D005571 ORTHO05D006919 5.4e-17 92.0 191 43.5
A03p09420 Brassica napus HOM05D005571 ORTHO05D006919 7.0e-17 91.7 201 38.3
BraA03t10260Z Brassica rapa HOM05D005571 ORTHO05D006919 7.0e-17 91.7 201 38.3
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 1.2e-16 90.9 196 36.7
unitig_0.g2084 Utricularia gibba HOM05D005571 ORTHO05D006919 1.6e-16 90.5 173 39.9
Dinv31944 Davidia involucrata HOM05D005571 ORTHO05D006919 2.0e-16 90.1 185 37.8
CARHR284960 Cardamine hirsuta HOM05D005571 ORTHO05D006919 7.8e-16 88.2 211 39.8
HanXRQChr06g0183961 Helianthus annuus HOM05D005571 ORTHO05D006919 1.0e-15 87.8 189 38.1
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 1.3e-15 87.4 214 36.0
Sc15g0004410 Simmondsia chinensis HOM05D005571 ORTHO05D006919 1.7e-15 87.0 159 43.4
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 2.3e-15 86.7 203 40.4
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 3.9e-15 85.9 211 37.0
BcaB01g04868 Brassica carinata HOM05D005571 ORTHO05D006919 1.1e-14 84.3 207 36.2
Prupe.1G354300 Prunus persica HOM05D005571 ORTHO05D006919 1.5e-14 84.0 250 33.2
Sp6g25100 Schrenkiella parvula HOM05D005571 ORTHO05D006919 1.5e-14 84.0 202 40.6
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 1.9e-14 83.6 197 37.1
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.8e-13 79.7 178 40.4
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 2.8e-13 79.7 178 40.4
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 2.8e-13 79.7 204 34.3
Thhalv10014687m.g Eutrema salsugineum HOM05D005571 ORTHO05D006919 3.6e-13 79.3 215 37.7
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 1.1e-12 77.8 217 35.0
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 5.8e-11 72.0 178 33.1
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 1.7e-10 70.5 212 34.4
Sabra11G0114300 Salix brachista HOM05D005571 ORTHO05D006919 2.2e-10 70.1 126 38.1
BolC9t58559H Brassica oleracea HOM05D005571 ORTHO05D006919 1.1e-09 67.8 163 37.4
BcaC04g18579 Brassica carinata HOM05D005571 ORTHO05D006919 1.4e-09 67.4 163 37.4
C09p56960 Brassica napus HOM05D005571 ORTHO05D006919 1.4e-09 67.4 163 37.4
A10p20370 Brassica napus HOM05D005571 ORTHO05D006919 6.6e-07 58.5 196 31.6
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 6.6e-07 58.5 186 31.2
Cpa.g.c36471 Carica papaya HOM05D005571 ORTHO05D006919 8.6e-07 58.2 84 45.2
A02p05480 Brassica napus HOM05D005571 ORTHO05D006919 1.1e-06 57.8 108 45.4
BraA02t05499Z Brassica rapa HOM05D005571 ORTHO05D006919 1.1e-06 57.8 108 45.4
BcaC03g13663 Brassica carinata HOM05D005571 ORTHO05D006919 1.5e-06 57.4 106 48.1
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus HOM05D005571 ORTHO05D006919 1.5e-06 57.4 106 48.1
Solyc04g082380.4 Solanum lycopersicum HOM05D005571 ORTHO05D006919 7.3e-06 55.1 107 41.1


User provided reference genes

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