Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g040720 Amaranthus hybridus HOM05D009559 ORTHO05D006373 3.6e-310 1067.4 534 100.0
Ah.07g198370 Amaranthus hybridus HOM05D009559 ORTHO05D006373 4.9e-259 897.5 506 89.1
Ah.02g119300 Amaranthus hybridus HOM05D009559 ORTHO05D006373 6.3e-214 747.7 516 73.6
Ah.16g108800 Amaranthus hybridus HOM05D009559 ORTHO05D017251 5.2e-192 674.9 516 68.0
Ah.13g067530 Amaranthus hybridus HOM05D009559 ORTHO05D017251 2.2e-182 642.9 552 65.2
Ah.03g144120 Amaranthus hybridus HOM05D009559 ORTHO05D061651 7.8e-164 581.3 483 65.4
Ah.12g060460 Amaranthus hybridus HOM05D009559 ORTHO05D061131 1.1e-149 534.3 319 80.9
Ah.01g010260 Amaranthus hybridus HOM05D009559 ORTHO05D060279 2.6e-127 459.9 270 81.5
Ah.03g148490 Amaranthus hybridus HOM05D009559 ORTHO05D060985 1.8e-120 437.2 271 77.1
Ah.10g025310 Amaranthus hybridus HOM05D009559 ORTHO05D061000 2.6e-111 406.8 516 48.8
Ah.03g144950 Amaranthus hybridus HOM05D009559 ORTHO05D061861 5.9e-111 405.6 273 73.6
Ah.04g157130 Amaranthus hybridus HOM05D009559 ORTHO05D059839 1.7e-110 404.1 269 72.5
Ah.06g186880 Amaranthus hybridus HOM05D001168 ORTHO05D001044 6.5e-102 375.6 516 46.3
Ah.04g157090 Amaranthus hybridus HOM05D000001 ORTHO05D000003 2.8e-97 360.1 306 61.8
Ah.05g174360 Amaranthus hybridus HOM05D009559 ORTHO05D061977 4.2e-93 346.3 313 60.4
Ah.03g146730 Amaranthus hybridus HOM05D009559 ORTHO05D017251 5.9e-87 325.9 509 38.9
Ah.02g119650 Amaranthus hybridus HOM05D009559 ORTHO05D060872 1.4e-83 314.7 420 48.1
Ah.01g010550 Amaranthus hybridus HOM05D009559 ORTHO05D061443 4.0e-75 286.6 177 79.1
Ah.01g010270 Amaranthus hybridus HOM05D009559 ORTHO05D060265 3.3e-69 266.9 222 68.0
Ah.01g009990 Amaranthus hybridus HOM05D009559 ORTHO05D006373 1.0e-62 245.4 147 78.2
Ah.07g198630 Amaranthus hybridus HOM05D009559 ORTHO05D060977 1.1e-59 235.3 199 65.8
Ah.01g010560 Amaranthus hybridus HOM05D009559 ORTHO05D061116 2.9e-57 227.3 194 61.3
Ah.01g012500 Amaranthus hybridus HOM05D009559 ORTHO05D061054 6.9e-51 206.1 141 71.6
Ah.02g122400 Amaranthus hybridus HOM05D009559 ORTHO05D061196 2.4e-43 181.0 136 75.0
Ah.12g060450 Amaranthus hybridus HOM05D009559 ORTHO05D059838 2.6e-42 177.6 185 57.3
Ah.01g013360 Amaranthus hybridus HOM05D009559 ORTHO05D061145 3.4e-42 177.2 128 67.2
Ah.03g144940 Amaranthus hybridus HOM05D009559 ORTHO05D061428 6.2e-36 156.4 148 60.1
Ah.08g223330 Amaranthus hybridus HOM05D009559 ORTHO05D060338 2.3e-30 137.9 79 81.0
Ah.05g174810 Amaranthus hybridus HOM05D009559 ORTHO05D061784 1.5e-29 135.2 75 82.7
EL10Ac4g09233 Beta vulgaris HOM05D012416 ORTHO05D006373 5.8e-26 123.2 440 27.3
AUR62034621 Chenopodium quinoa HOM05D012416 ORTHO05D006373 5.5e-24 116.7 443 26.9
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.2e-23 115.5 443 26.9
AUR62025216 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.1e-21 109.0 433 26.6
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.9e-21 108.2 446 26.2
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 1.6e-20 105.1 425 24.7
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 2.8e-20 104.4 369 28.5
AUR62044466 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.8e-20 104.4 331 28.7
AUR62044633 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.8e-17 94.0 281 28.8
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 1.9e-16 91.7 454 24.7
EL10Ac4g08685 Beta vulgaris HOM05D015602 ORTHO05D006373 5.5e-16 90.1 454 24.2
AUR62043954 Chenopodium quinoa HOM05D005385 ORTHO05D006768 5.5e-16 90.1 401 26.4
EL10Ac1g01891 Beta vulgaris HOM05D008347 ORTHO05D006373 2.1e-15 88.2 433 25.4
Ah.11g039550 Amaranthus hybridus HOM05D009559 ORTHO05D060127 3.9e-14 84.0 95 42.1
EL10As4g23418 Beta vulgaris HOM05D015602 ORTHO05D006373 3.9e-14 84.0 194 26.3
AUR62042611 Chenopodium quinoa HOM05D012416 ORTHO05D006373 5.7e-13 80.1 357 25.5
AUR62044346 Chenopodium quinoa HOM05D012416 ORTHO05D006373 5.7e-13 80.1 209 29.2
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.8e-12 77.8 360 25.3
EL10Ac2g03375 Beta vulgaris HOM05D015602 ORTHO05D006373 8.2e-12 76.3 186 26.9
AUR62024102 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.8e-11 75.1 426 23.2
AUR62035164 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.1e-11 72.8 383 23.2
EL10Ac1g01624 Beta vulgaris HOM05D008347 ORTHO05D006373 1.9e-08 65.1 233 25.3
C02p25050 Brassica napus HOM05D009356 ORTHO05D010353 3.6e-07 60.8 171 25.1
AUR62038304 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.6e-07 60.8 193 27.5
C02p15580 Brassica napus HOM05D009356 ORTHO05D010353 4.7e-07 60.5 171 25.1
C07p06990 Brassica napus HOM05D009356 ORTHO05D010353 4.7e-07 60.5 171 25.1
Sp6g09590 Schrenkiella parvula HOM05D009356 ORTHO05D010353 6.1e-07 60.1 166 25.3
C04p15140 Brassica napus HOM05D009356 ORTHO05D010353 7.9e-07 59.7 171 25.1


User provided reference genes

Program Settings