Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g040280 Amaranthus hybridus HOM05D000003 ORTHO05D011611 1.6e-83 312.8 160 100.0
Ah.10g029790 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.1e-25 120.6 178 42.1
Ah.10g026810 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.6e-25 118.2 208 38.9
Ah.02g122310 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.0e-18 97.4 83 53.0
CANSAT11G0988 Cannabis sativa HOM05D000003 ORTHO05D000007 1.6e-16 90.1 123 39.0
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 1.4e-15 87.0 75 53.3
Ah.12g063330 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.8e-15 86.7 83 48.2
Ah.14g080910 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.8e-15 86.7 119 38.7
Ah.03g143450 Amaranthus hybridus HOM05D000003 ORTHO05D000007 3.1e-15 85.9 110 42.7
CANSAT01G0784 Cannabis sativa HOM05D000003 ORTHO05D000007 4.0e-15 85.5 65 55.4
CANSAT11G0663 Cannabis sativa HOM05D000004 ORTHO05D000034 4.0e-15 85.5 65 55.4
Ah.15g097110 Amaranthus hybridus HOM05D000003 ORTHO05D000007 9.0e-15 84.3 75 50.7
Ah.13g067160 Amaranthus hybridus HOM05D017406 ORTHO05D000007 1.5e-14 83.6 76 51.3
EL10Ac3g06400 Beta vulgaris HOM05D000003 ORTHO05D000007 2.0e-14 83.2 65 47.7
CANSAT78G1995 Cannabis sativa HOM05D000003 ORTHO05D000007 2.0e-14 83.2 72 50.0
CANSAT25G2441 Cannabis sativa HOM05D000003 ORTHO05D000007 2.6e-14 82.8 65 60.0
EL10Ac8g19445 Beta vulgaris HOM05D000003 ORTHO05D000007 4.5e-14 82.0 143 30.1
CANSAT01G2288 Cannabis sativa HOM05D000003 ORTHO05D000006 5.8e-14 81.6 64 53.1
CANSAT35G0925 Cannabis sativa HOM05D000003 ORTHO05D000007 7.6e-14 81.3 66 53.0
CANSAT78G1658 Cannabis sativa HOM05D000003 ORTHO05D000007 7.6e-14 81.3 60 58.3
EL10Ac1g02104 Beta vulgaris HOM05D000003 ORTHO05D011611 1.0e-13 80.9 68 45.6
EL10Ac7g17199 Beta vulgaris HOM05D000003 ORTHO05D000007 1.0e-13 80.9 78 41.0
EL10Ac8g19433 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-13 79.7 148 30.4
Ah.04g159630 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.9e-13 79.3 159 34.6
EL10Ac5g11620 Beta vulgaris HOM05D000003 ORTHO05D000007 2.9e-13 79.3 109 33.9
Nitab4.5_0001519g0110 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.9e-13 79.3 70 50.0
EL10As3g23356 Beta vulgaris HOM05D000003 ORTHO05D000007 3.8e-13 79.0 95 36.8
CANSAT64G2710 Cannabis sativa HOM05D000003 ORTHO05D000007 3.8e-13 79.0 73 42.5
CANSAT54G2645 Cannabis sativa HOM05D000003 ORTHO05D000007 6.5e-13 78.2 65 43.1
EL10Ac7g17172 Beta vulgaris HOM05D000003 ORTHO05D000007 8.4e-13 77.8 118 29.7
CANSAT11G1056 Cannabis sativa HOM05D000003 ORTHO05D000007 8.4e-13 77.8 60 51.7
CANSAT25G3759 Cannabis sativa HOM05D000003 ORTHO05D000007 8.4e-13 77.8 60 51.7
CANSAT56G3933 Cannabis sativa HOM05D000003 ORTHO05D000007 1.4e-12 77.0 65 44.6
CANSAT54G2456 Cannabis sativa HOM05D000003 ORTHO05D000007 2.5e-12 76.3 60 50.0
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 3.2e-12 75.9 70 48.6
CANSAT01G0517 Cannabis sativa HOM05D000003 ORTHO05D000007 3.2e-12 75.9 78 44.9
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 3.2e-12 75.9 59 50.8
Ah.12g061560 Amaranthus hybridus HOM05D000003 ORTHO05D000007 4.2e-12 75.5 162 33.3
EL10Ac6g14322 Beta vulgaris HOM05D000003 ORTHO05D000007 4.2e-12 75.5 111 31.5
EL10Ac9g22997 Beta vulgaris HOM05D000003 ORTHO05D000007 7.1e-12 74.7 138 31.2
EL10Ac3g06546 Beta vulgaris HOM05D000003 ORTHO05D000007 9.3e-12 74.3 70 38.6
EL10Ac1g02040 Beta vulgaris HOM05D000003 ORTHO05D000007 1.6e-11 73.6 107 38.3
EL10Ac6g13827 Beta vulgaris HOM05D000003 ORTHO05D000007 2.7e-11 72.8 75 45.3
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 3.5e-11 72.4 66 40.9
EL10Ac4g09212 Beta vulgaris HOM05D000003 ORTHO05D000007 4.6e-11 72.0 67 46.3
CANSAT25G1407 Cannabis sativa HOM05D000003 ORTHO05D000007 4.6e-11 72.0 65 43.1
Hund10169 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.6e-11 72.0 59 50.8
EL10Ac6g14081 Beta vulgaris HOM05D000003 ORTHO05D000007 6.1e-11 71.6 81 38.3
Nitab4.5_0000151g0420 Nicotiana tabacum HOM05D000003 ORTHO05D011611 6.1e-11 71.6 65 47.7
Nitab4.5_0005442g0030 Nicotiana tabacum HOM05D000003 ORTHO05D011611 6.1e-11 71.6 72 44.4
EL10Ac1g01965 Beta vulgaris HOM05D000003 ORTHO05D000007 2.3e-10 69.7 59 42.4
Hund10220 Selenicereus undatus HOM05D000003 ORTHO05D000007 3.0e-10 69.3 64 42.2
EL10Ac6g14708 Beta vulgaris HOM05D000003 ORTHO05D000007 3.9e-10 68.9 102 31.4
CAN.G1463.3 Capsicum annuum HOM05D000479 ORTHO05D000007 3.9e-10 68.9 59 47.5
Hund31250 Selenicereus undatus HOM05D014118 ORTHO05D011611 5.1e-10 68.6 67 44.8
Nitab4.5_0000151g0430 Nicotiana tabacum HOM05D000003 ORTHO05D011611 6.7e-10 68.2 66 42.4
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 1.1e-09 67.4 113 25.7
CANSAT80G0090 Cannabis sativa HOM05D000003 ORTHO05D000007 1.5e-09 67.0 73 45.2
Nitab4.5_0004011g0050 Nicotiana tabacum HOM05D000003 ORTHO05D011611 2.5e-09 66.2 61 42.6
EL10Ac8g19497 Beta vulgaris HOM05D000003 ORTHO05D000007 3.3e-09 65.9 76 38.2
CANSAT11G0526 Cannabis sativa HOM05D000003 ORTHO05D000007 3.3e-09 65.9 58 51.7
Hund00727 Selenicereus undatus HOM05D063244 ORTHO05D011611 3.3e-09 65.9 47 51.1
EL10Ac6g13748 Beta vulgaris HOM05D000003 ORTHO05D000007 4.3e-09 65.5 98 29.6
CANSAT56G0142 Cannabis sativa HOM05D000003 ORTHO05D000007 4.3e-09 65.5 73 43.8
EL10As3g23362 Beta vulgaris HOM05D000003 ORTHO05D000007 5.7e-09 65.1 111 31.5
Sopen03g020920 Solanum pennellii HOM05D015165 ORTHO05D017089 5.7e-09 65.1 55 41.8
EL10Ac3g06704 Beta vulgaris HOM05D000003 ORTHO05D000007 7.4e-09 64.7 110 31.8
Solyc03g078190.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 7.4e-09 64.7 55 43.6
CANSAT01G0243 Cannabis sativa HOM05D000003 ORTHO05D000007 2.2e-08 63.2 59 47.5
CANSAT25G1254 Cannabis sativa HOM05D000003 ORTHO05D000007 2.2e-08 63.2 59 47.5
EL10Ac6g14808 Beta vulgaris HOM05D000003 ORTHO05D000007 2.8e-08 62.8 120 26.7
CAN.G551.108 Capsicum annuum HOM05D002280 ORTHO05D011611 2.8e-08 62.8 111 30.6
Nitab4.5_0002525g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.8e-08 62.8 49 55.1
EL10Ac1g01488 Beta vulgaris HOM05D000003 ORTHO05D000007 3.7e-08 62.4 97 28.9
PGSC0003DMG400035899 Solanum tuberosum HOM05D000003 ORTHO05D000007 3.7e-08 62.4 69 36.2
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 6.3e-08 61.6 90 37.8
CANSAT21G1545 Cannabis sativa HOM05D000003 ORTHO05D000007 6.3e-08 61.6 105 29.5
EL10Ac1g01519 Beta vulgaris HOM05D000003 ORTHO05D000007 8.2e-08 61.2 55 40.0
EL10Ac8g19738 Beta vulgaris HOM05D000003 ORTHO05D000007 8.2e-08 61.2 106 35.8
CANSAT54G2202 Cannabis sativa HOM05D000003 ORTHO05D000007 1.1e-07 60.8 61 42.6
Solyc10g075080.1 Solanum lycopersicum HOM05D015165 ORTHO05D011611 1.1e-07 60.8 58 39.7
CANSAT11G2544 Cannabis sativa HOM05D000003 ORTHO05D000007 1.4e-07 60.5 48 45.8
Hund10601 Selenicereus undatus HOM05D010531 ORTHO05D000105 1.8e-07 60.1 49 46.9
Hund23554 Selenicereus undatus HOM05D000003 ORTHO05D011611 2.4e-07 59.7 59 42.4
Ah.03g143470 Amaranthus hybridus HOM05D000003 ORTHO05D000007 3.1e-07 59.3 44 59.1
Nitab4.5_0003024g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000007 4.1e-07 58.9 55 45.5
CANSAT01G1178 Cannabis sativa HOM05D000003 ORTHO05D000007 5.3e-07 58.5 48 47.9
CANSAT78G1313 Cannabis sativa HOM05D000003 ORTHO05D000007 6.9e-07 58.2 41 63.4
EL10Ac7g17161 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-06 57.4 61 32.8
Nitab4.5_0005640g0020 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.5e-06 57.0 74 31.1
CANSAT01G1392 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-06 56.6 58 34.5
Sopen07g022300 Solanum pennellii HOM05D000003 ORTHO05D000007 2.0e-06 56.6 59 44.1
EL10Ac1g02231 Beta vulgaris HOM05D000003 ORTHO05D000007 2.6e-06 56.2 44 52.3
EL10Ac2g02962 Beta vulgaris HOM05D000003 ORTHO05D000007 2.6e-06 56.2 44 43.2
Hund15018 Selenicereus undatus HOM05D000185 ORTHO05D011611 5.9e-06 55.1 37 45.9


User provided reference genes

Program Settings