Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g039950 Amaranthus hybridus HOM05D047386 ORTHO05D008483 3.7e-145 518.5 319 100.0
EL10Ac1g02166 Beta vulgaris HOM05D047386 ORTHO05D008483 5.4e-27 125.9 354 43.5
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 7.8e-10 68.9 119 47.9
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 1.3e-09 68.2 201 32.8
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 6.6e-09 65.9 209 33.0
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 8.6e-09 65.5 201 34.8
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 1.1e-08 65.1 220 34.1
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 3.3e-08 63.5 191 35.6
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 1.6e-07 61.2 196 33.2
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 6.2e-07 59.3 111 44.1
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.1e-06 58.5 212 32.1
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.1e-06 58.5 213 33.3
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 1.4e-06 58.2 211 34.1
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 3.1e-06 57.0 216 34.7
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 4.0e-06 56.6 97 47.4
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 4.0e-06 56.6 210 31.4
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 5.2e-06 56.2 92 46.7
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 5.2e-06 56.2 92 46.7
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 8.9e-06 55.5 97 45.4


User provided reference genes

Program Settings