Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g039550 Amaranthus hybridus HOM05D009559 ORTHO05D060127 2.0e-103 379.0 185 100.0
Ah.03g146730 Amaranthus hybridus HOM05D009559 ORTHO05D017251 5.2e-30 135.2 98 66.3
EL10Ac1g02237 Beta vulgaris HOM05D001290 ORTHO05D001180 2.6e-21 106.3 64 79.7
AUR62035410 Chenopodium quinoa HOM05D001290 ORTHO05D001180 4.1e-19 99.0 66 74.2
AUR62035697 Chenopodium quinoa HOM05D001290 ORTHO05D001180 5.9e-18 95.1 65 73.8
Ah.02g119300 Amaranthus hybridus HOM05D009559 ORTHO05D006373 9.8e-13 77.8 95 40.0
Ah.11g040720 Amaranthus hybridus HOM05D009559 ORTHO05D006373 1.7e-12 77.0 95 42.1
Ah.07g198370 Amaranthus hybridus HOM05D009559 ORTHO05D006373 2.8e-12 76.3 95 43.2
Ah.01g009990 Amaranthus hybridus HOM05D009559 ORTHO05D006373 1.8e-11 73.6 95 41.1
Ah.01g010270 Amaranthus hybridus HOM05D009559 ORTHO05D060265 1.2e-10 70.9 95 37.9
Ah.13g067530 Amaranthus hybridus HOM05D009559 ORTHO05D017251 1.0e-09 67.8 96 39.6
Ah.16g108800 Amaranthus hybridus HOM05D009559 ORTHO05D017251 3.8e-09 65.9 87 37.9
Sc12g0004270 Simmondsia chinensis HOM05D001290 ORTHO05D001180 2.5e-08 63.2 68 52.9
Hund05231 Selenicereus undatus HOM05D001290 ORTHO05D001180 3.0e-06 56.2 59 47.5
Ah.04g157130 Amaranthus hybridus HOM05D009559 ORTHO05D059839 5.2e-06 55.5 72 37.5


User provided reference genes

Program Settings