Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g039290 Amaranthus hybridus HOM05D000002 ORTHO05D001134 1.9e-74 282.3 134 100.0
Ah.01g010720 Amaranthus hybridus HOM05D000002 ORTHO05D001134 2.9e-43 178.7 179 56.4
Ah.12g054760 Amaranthus hybridus HOM05D000002 ORTHO05D001134 4.1e-37 158.3 82 92.7
Ah.03g146900 Amaranthus hybridus HOM05D000002 ORTHO05D001134 8.1e-25 117.5 64 89.1
Ah.10g026270 Amaranthus hybridus HOM05D000002 ORTHO05D001134 5.8e-23 111.3 86 68.6
Ah.10g027000 Amaranthus hybridus HOM05D000002 ORTHO05D001134 3.2e-21 105.5 64 81.2
EL10Ac1g01667 Beta vulgaris HOM05D000002 ORTHO05D000001 3.5e-20 102.1 171 36.3
CANSAT35G1620 Cannabis sativa HOM05D000002 ORTHO05D001134 3.3e-18 95.5 162 37.0
Sabra11G0092000 Salix brachista HOM05D000002 ORTHO05D001134 3.3e-18 95.5 64 70.3
Sabra11G0076200 Salix brachista HOM05D000002 ORTHO05D001134 5.6e-18 94.7 64 68.8
Sabra05G0016200 Salix brachista HOM05D000002 ORTHO05D001134 1.2e-17 93.6 64 68.8
Sabra19G0009600 Salix brachista HOM05D000002 ORTHO05D001134 1.2e-17 93.6 64 67.2
Sabra18G0065300 Salix brachista HOM05D000002 ORTHO05D001134 2.1e-17 92.8 63 68.3
Migut.M00507 Erythranthe guttata HOM05D000002 ORTHO05D001134 2.8e-17 92.4 227 28.2
Sabra11G0075700 Salix brachista HOM05D000002 ORTHO05D001134 4.7e-17 91.7 64 67.2
CANSAT35G0560 Cannabis sativa HOM05D000002 ORTHO05D001134 3.1e-16 89.0 71 60.6
CANSAT01G0629 Cannabis sativa HOM05D000002 ORTHO05D001134 1.2e-15 87.0 64 62.5
CANSAT56G2162 Cannabis sativa HOM05D000002 ORTHO05D001134 1.5e-15 86.7 64 62.5
CANSAT56G1418 Cannabis sativa HOM05D000002 ORTHO05D001134 4.4e-15 85.1 64 60.9
CANSAT21G1843 Cannabis sativa HOM05D000002 ORTHO05D001134 2.2e-14 82.8 64 59.4
CANSAT35G0076 Cannabis sativa HOM05D000002 ORTHO05D001134 2.2e-14 82.8 64 59.4
CANSAT01G0351 Cannabis sativa HOM05D000002 ORTHO05D001134 6.4e-14 81.3 88 48.9
CANSAT54G3019 Cannabis sativa HOM05D000002 ORTHO05D001134 8.4e-14 80.9 64 57.8
CANSAT54G2526 Cannabis sativa HOM05D000002 ORTHO05D001134 1.1e-13 80.5 147 36.7
CANSAT56G3404 Cannabis sativa HOM05D000002 ORTHO05D001134 1.1e-13 80.5 73 52.1
CANSAT01G1051 Cannabis sativa HOM05D000002 ORTHO05D001134 3.2e-13 79.0 64 57.8
CANSAT64G0883 Cannabis sativa HOM05D000002 ORTHO05D001134 3.2e-13 79.0 59 61.0
CANSAT01G2951 Cannabis sativa HOM05D000002 ORTHO05D001134 5.4e-13 78.2 62 58.1
AUR62032617 Chenopodium quinoa HOM05D000202 ORTHO05D001134 7.1e-13 77.8 64 57.8
Ca_23898_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.2e-12 77.0 64 54.7
CANSAT01G2684 Cannabis sativa HOM05D000002 ORTHO05D001134 1.6e-12 76.6 59 59.3
CANSAT01G3173 Cannabis sativa HOM05D000002 ORTHO05D001134 3.5e-12 75.5 74 50.0
CANSAT80G1091 Cannabis sativa HOM05D000002 ORTHO05D001134 4.6e-12 75.1 59 57.6
Atru.chr1.3241 Acer truncatum HOM05D000002 ORTHO05D001134 7.8e-12 74.3 64 56.2
Cpa.g.sc79.36 Carica papaya HOM05D000002 ORTHO05D001134 1.7e-11 73.2 80 46.2
AUR62040777 Chenopodium quinoa HOM05D000002 ORTHO05D000031 1.7e-11 73.2 73 52.1
Cpa.g.sc63.11 Carica papaya HOM05D000002 ORTHO05D001134 1.1e-10 70.5 63 50.8
THA.LOC104818495 Tarenaya hassleriana HOM05D000002 ORTHO05D001134 4.3e-10 68.6 64 51.6
Sp7g08060 Schrenkiella parvula HOM05D000002 ORTHO05D001134 5.6e-10 68.2 137 33.6
Atru.chr11.404 Acer truncatum HOM05D000002 ORTHO05D001134 9.6e-10 67.4 64 48.4
CSS0044748 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 1.6e-09 66.6 64 46.9
CSS0015894 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0017973 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0019952 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0021489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0031421 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0032029 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0040386 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0043616 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0048219 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 2.8e-09 65.9 64 46.9
CSS0001359 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 3.6e-09 65.5 64 46.9
CSS0005787 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 3.6e-09 65.5 64 46.9
CSS0013561 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 3.6e-09 65.5 64 46.9
Sabra16G0135200 Salix brachista HOM05D000002 ORTHO05D001134 3.6e-09 65.5 49 63.3
CSS0045046 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.7e-09 65.1 64 46.9
CSS0047428 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 4.7e-09 65.1 64 46.9
Sabra04G0092600 Salix brachista HOM05D000002 ORTHO05D001134 4.7e-09 65.1 42 71.4
CSS0004348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D001134 6.2e-09 64.7 64 46.9
RcHm_v2.0_Chr3g0467151 Rosa chinensis HOM05D000002 ORTHO05D001134 6.2e-09 64.7 72 44.4
AL5G19750 Arabidopsis lyrata HOM05D000002 ORTHO05D000001 2.4e-08 62.8 193 29.0
CANSAT54G1705 Cannabis sativa HOM05D000009 ORTHO05D001134 2.4e-08 62.8 54 55.6
Atru.chr13.1760 Acer truncatum HOM05D000002 ORTHO05D001134 6.8e-08 61.2 73 41.1
Cpa.g.sc4.185 Carica papaya HOM05D000002 ORTHO05D001134 6.8e-08 61.2 63 42.9
EL10Ac6g13863 Beta vulgaris HOM05D000002 ORTHO05D001134 8.9e-08 60.8 74 41.9
CANSAT64G0791 Cannabis sativa HOM05D000002 ORTHO05D001134 8.9e-08 60.8 47 59.6
CANSAT01G2557 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-07 60.1 53 50.9
Cpa.g.sc495.1 Carica papaya HOM05D000002 ORTHO05D001134 3.4e-07 58.9 64 48.4
AUR62029287 Chenopodium quinoa HOM05D000893 ORTHO05D001134 3.4e-07 58.9 63 47.6
MD03G1045100 Malus domestica HOM05D000002 ORTHO05D001134 4.4e-07 58.5 73 42.5
Atru.chr13.1874 Acer truncatum HOM05D000002 ORTHO05D001134 5.8e-07 58.2 63 44.4
Cpa.g.sc22.74 Carica papaya HOM05D000002 ORTHO05D001134 7.6e-07 57.8 64 50.0
Rhsim01G0098800 Rhododendron simsii HOM05D000002 ORTHO05D001134 7.6e-07 57.8 62 48.4
TPR.G34101 Trifolium pratense HOM05D000002 ORTHO05D001134 9.9e-07 57.4 64 43.8
Sp7g07980 Schrenkiella parvula HOM05D000002 ORTHO05D001134 1.7e-06 56.6 164 27.4
BcaB07g33707 Brassica carinata HOM05D000002 ORTHO05D001134 2.2e-06 56.2 63 46.0
CANSAT56G3668 Cannabis sativa HOM05D000002 ORTHO05D001134 8.4e-06 54.3 124 33.9
ECA233G0623 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.4e-06 54.3 63 39.7


User provided reference genes

Program Settings