Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 4.9e-138 494.6 270 100.0
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 1.6e-93 346.7 272 73.5
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 7.9e-80 301.2 249 62.7
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 3.9e-79 298.9 262 63.0
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 4.8e-77 292.0 277 59.6
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 1.8e-76 290.0 277 58.8
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 5.3e-76 288.5 277 58.8
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 7.7e-75 284.6 245 60.8
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 1.0e-74 284.3 277 59.2
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 2.2e-74 283.1 248 61.7
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 2.9e-74 282.7 232 63.4
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 5.0e-74 282.0 277 56.3
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 6.5e-74 281.6 275 61.1
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 6.5e-74 281.6 241 62.7
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 1.9e-73 280.0 185 74.6
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 7.2e-73 278.1 185 74.1
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 7.2e-73 278.1 282 59.6
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 9.4e-73 277.7 245 64.9
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.6e-72 276.9 248 59.7
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 4.7e-72 275.4 183 73.2
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 6.1e-72 275.0 275 60.0
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 3.0e-71 272.7 255 59.2
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.0e-71 272.7 217 70.0
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 3.9e-71 272.3 216 65.7
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 5.1e-71 271.9 246 64.2
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 3.3e-70 269.2 179 72.6
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 3.3e-70 269.2 218 61.5
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 4.4e-70 268.9 187 69.0
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 4.4e-70 268.9 185 69.7
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 4.4e-70 268.9 282 54.6
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 5.7e-70 268.5 185 70.3
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 5.7e-70 268.5 244 59.4
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 7.4e-70 268.1 184 69.6
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 7.4e-70 268.1 189 67.7
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.3e-69 267.3 263 56.3
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 1.3e-69 267.3 214 65.9
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 1.7e-69 266.9 235 59.6
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 2.2e-69 266.5 239 59.8
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 2.8e-69 266.2 187 69.0
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 3.7e-69 265.8 251 59.0
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 3.7e-69 265.8 183 70.5
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 3.7e-69 265.8 247 58.3
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 6.3e-69 265.0 184 68.5
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 8.2e-69 264.6 277 54.9
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 8.2e-69 264.6 270 55.2
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 8.2e-69 264.6 183 69.9
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 1.1e-68 264.2 186 68.8
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 4.1e-68 262.3 228 62.7
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 5.3e-68 261.9 184 67.9
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 7.0e-68 261.5 185 68.1
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 1.2e-67 260.8 257 60.3
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 1.5e-67 260.4 273 54.2
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 1.5e-67 260.4 179 70.4
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 3.5e-67 259.2 212 61.8
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 3.5e-67 259.2 261 58.2
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 7.7e-67 258.1 274 56.9
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.3e-66 257.3 275 52.4
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 2.9e-66 256.1 264 56.8
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 5.0e-66 255.4 279 58.8
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 6.5e-66 255.0 202 62.9
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 1.1e-65 254.2 237 58.2
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 1.9e-65 253.4 244 58.2
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 3.2e-65 252.7 243 59.7
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 4.2e-65 252.3 280 55.7
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 4.2e-65 252.3 213 62.4
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 2.7e-64 249.6 237 60.8
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 6.1e-64 248.4 254 55.1
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 1.0e-63 247.7 184 65.8
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 1.0e-63 247.7 240 57.1
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 1.0e-63 247.7 282 54.6
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 1.0e-63 247.7 240 57.9
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 1.4e-63 247.3 175 66.9
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 1.4e-63 247.3 277 52.0
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 5.2e-63 245.4 204 62.7
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 9.7e-62 241.1 232 56.0
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 1.3e-61 240.7 272 51.1
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 2.8e-61 239.6 186 64.5
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 6.3e-61 238.4 271 52.0
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.8e-60 236.9 200 59.5
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 5.3e-60 235.3 184 63.6
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 7.0e-60 235.0 236 54.7
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 1.6e-59 233.8 188 61.7
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 2.0e-59 233.4 240 51.7
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 4.5e-59 232.3 190 64.2
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 1.7e-58 230.3 243 55.1
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.1e-57 227.6 180 62.8
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 2.1e-56 223.4 181 60.2
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 2.7e-56 223.0 175 62.3
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 6.1e-56 221.9 274 52.9
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 8.0e-56 221.5 190 57.9
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 8.8e-55 218.0 325 42.8
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 3.4e-54 216.1 138 76.1
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 9.1e-52 208.0 175 58.3
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 4.7e-48 195.7 207 60.4
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 4.0e-47 192.6 176 55.7
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 4.0e-47 192.6 180 52.2
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 2.0e-46 190.3 171 59.1
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 1.1e-44 184.5 183 50.3
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 9.1e-44 181.4 199 55.3
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 1.1e-41 174.5 204 52.9
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 2.5e-41 173.3 223 45.7
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 2.3e-39 166.8 116 69.0
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 7.5e-38 161.8 178 47.8
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 2.5e-33 146.7 203 44.3
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.6e-32 144.1 81 84.0
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 6.0e-27 125.6 92 69.6
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 1.3e-26 124.4 166 50.6
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 1.5e-22 110.9 76 65.8
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 1.9e-20 104.0 179 37.4
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 9.9e-14 81.6 95 46.3
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 1.6e-11 74.3 65 63.1


User provided reference genes

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