Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 2.8e-45 184.9 91 100.0
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 7.6e-19 97.1 82 63.4
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 1.3e-18 96.3 79 62.0
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 9.3e-17 90.1 85 62.4
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 9.3e-17 90.1 83 60.2
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 1.2e-16 89.7 83 60.2
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 3.6e-16 88.2 83 60.2
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 3.6e-16 88.2 88 55.7
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 4.6e-16 87.8 83 60.2
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 7.9e-16 87.0 91 54.9
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.9e-16 87.0 83 59.0
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 1.0e-15 86.7 86 57.0
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 1.0e-15 86.7 88 56.8
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 1.4e-15 86.3 79 57.0
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 1.8e-15 85.9 83 59.0
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 1.8e-15 85.9 79 59.5
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 2.3e-15 85.5 78 62.8
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 6.7e-15 84.0 84 57.1
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 6.7e-15 84.0 79 59.5
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 8.8e-15 83.6 83 56.6
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 1.5e-14 82.8 80 58.8
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 1.5e-14 82.8 83 57.8
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 1.9e-14 82.4 79 58.2
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 4.3e-14 81.3 77 55.8
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 5.7e-14 80.9 79 54.4
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 5.7e-14 80.9 84 58.3
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 1.7e-13 79.3 79 59.5
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 1.7e-13 79.3 82 54.9
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 2.8e-13 78.6 81 58.0
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 2.8e-13 78.6 93 50.5
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 4.8e-13 77.8 68 57.4
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 4.8e-13 77.8 83 54.2
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.8e-13 77.8 82 54.9
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 4.8e-13 77.8 82 54.9
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 6.3e-13 77.4 80 57.5
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 6.3e-13 77.4 80 57.5
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 8.2e-13 77.0 77 55.8
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 8.2e-13 77.0 78 52.6
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 1.1e-12 76.6 77 59.7
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 1.1e-12 76.6 83 53.0
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 1.4e-12 76.3 76 56.6
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.4e-12 76.3 80 56.2
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 1.4e-12 76.3 81 51.9
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 2.4e-12 75.5 98 46.9
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 3.1e-12 75.1 84 54.8
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 3.1e-12 75.1 84 52.4
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 5.3e-12 74.3 78 55.1
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 5.3e-12 74.3 75 60.0
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 5.3e-12 74.3 75 60.0
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 5.3e-12 74.3 79 51.9
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 5.3e-12 74.3 79 50.6
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 6.9e-12 73.9 79 53.2
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 6.9e-12 73.9 78 53.8
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 9.1e-12 73.6 83 55.4
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 9.1e-12 73.6 80 53.8
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.2e-11 73.2 82 48.8
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 1.2e-11 73.2 63 61.9
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.2e-11 73.2 79 54.4
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.2e-11 73.2 79 54.4
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 1.2e-11 73.2 77 53.2
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 1.5e-11 72.8 92 46.7
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 2.6e-11 72.0 75 56.0
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 3.4e-11 71.6 78 51.3
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 3.4e-11 71.6 79 50.6
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 4.5e-11 71.2 77 49.4
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 4.5e-11 71.2 77 49.4
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 4.5e-11 71.2 77 49.4
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 4.5e-11 71.2 77 49.4
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 4.5e-11 71.2 79 48.1
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 4.5e-11 71.2 80 52.5
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 4.5e-11 71.2 83 53.0
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 5.9e-11 70.9 77 49.4
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 5.9e-11 70.9 80 51.2
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 5.9e-11 70.9 77 54.5
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 5.9e-11 70.9 83 49.4
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.0e-10 70.1 79 54.4
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 1.3e-10 69.7 78 48.7
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 1.7e-10 69.3 86 46.5
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 1.7e-10 69.3 83 53.0
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 2.2e-10 68.9 81 46.9
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 2.9e-10 68.6 83 53.0
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 5.0e-10 67.8 78 48.7
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 5.0e-10 67.8 78 48.7
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 6.5e-10 67.4 78 50.0
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 6.5e-10 67.4 78 50.0
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 6.5e-10 67.4 80 48.8
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 6.5e-10 67.4 78 53.8
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 6.5e-10 67.4 91 47.3
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 8.5e-10 67.0 85 48.2
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 1.1e-09 66.6 78 47.4
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 1.4e-09 66.2 81 51.9
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 1.9e-09 65.9 78 51.3
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 1.9e-09 65.9 78 50.0
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 1.9e-09 65.9 78 48.7
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 1.9e-09 65.9 83 50.6
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 2.5e-09 65.5 78 47.4
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 2.5e-09 65.5 78 47.4
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 2.5e-09 65.5 87 46.0
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 4.2e-09 64.7 91 44.0
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 4.2e-09 64.7 84 41.7
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 7.2e-09 63.9 75 53.3
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 9.4e-09 63.5 84 46.4
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 1.2e-08 63.2 77 48.1
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 3.6e-08 61.6 79 45.6


User provided reference genes

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