Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 9.3e-181 637.9 705 100.0
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.4e-104 384.8 704 83.1
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 7.1e-80 302.8 629 84.7
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 2.9e-65 254.2 697 76.5
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.6e-60 238.4 673 73.0
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 1.7e-57 228.4 652 74.5
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 1.9e-56 224.9 679 73.5
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.5e-53 215.3 651 71.6
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 5.7e-53 213.4 680 74.0
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 1.3e-52 212.2 196 57.7
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 1.3e-52 212.2 644 76.4
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.7e-52 210.7 634 76.5
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.3e-51 206.8 328 67.7
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 1.2e-50 205.7 680 73.7
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 3.4e-50 204.1 211 55.0
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 2.9e-49 201.1 685 65.0
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 4.2e-48 197.2 667 73.2
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 2.0e-45 188.3 667 73.2
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 2.0e-45 188.3 667 73.2
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 2.2e-44 184.9 651 73.7
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 3.1e-43 181.0 691 63.4
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 7.0e-43 179.9 674 71.1
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.0e-42 178.3 198 48.0
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 3.4e-42 177.6 622 68.0
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 5.9e-42 176.8 141 61.0
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 1.3e-41 175.6 660 73.3
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 2.9e-41 174.5 652 73.6
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 1.9e-40 171.8 663 72.1
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 7.2e-40 169.9 663 71.9
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 2.7e-39 167.9 654 72.6
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 2.7e-39 167.9 188 50.5
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 4.7e-39 167.2 684 69.9
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 8.0e-39 166.4 167 51.5
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 8.0e-39 166.4 192 49.5
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 1.4e-38 165.6 683 66.9
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 1.8e-38 165.2 149 55.0
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 3.9e-38 164.1 642 72.7
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 5.2e-38 163.7 283 70.7
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 6.7e-38 163.3 166 53.0
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 6.7e-38 163.3 166 53.0
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 6.7e-38 163.3 166 53.0
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 6.7e-38 163.3 679 70.8
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 1.1e-37 162.5 167 52.1
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 1.1e-37 162.5 167 52.1
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 1.1e-37 162.5 183 50.8
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 1.5e-37 162.2 151 53.6
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 3.3e-37 161.0 167 51.5
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 4.4e-37 160.6 179 50.8
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 4.4e-37 160.6 683 67.2
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 4.4e-37 160.6 180 53.9
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 4.4e-37 160.6 660 72.1
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 4.4e-37 160.6 159 54.1
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 7.4e-37 159.8 653 72.0
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 1.3e-36 159.1 693 69.4
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 2.8e-36 157.9 146 54.8
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 2.8e-36 157.9 146 54.8
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 4.8e-36 157.1 176 52.3
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 1.1e-35 156.0 179 48.6
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 1.4e-35 155.6 184 47.8
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 1.4e-35 155.6 186 50.0
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 1.4e-35 155.6 138 58.7
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.1e-35 154.5 283 50.5
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 3.1e-35 154.5 674 70.3
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 4.1e-35 154.1 144 58.3
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 7.0e-35 153.3 167 53.3
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 7.0e-35 153.3 689 69.5
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.2e-34 152.5 138 58.7
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.2e-34 152.5 609 75.9
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 1.6e-34 152.1 176 50.0
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.6e-34 152.1 176 50.0
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 1.6e-34 152.1 137 56.2
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 3.5e-34 151.0 128 60.2
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 4.5e-34 150.6 162 51.2
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 5.9e-34 150.2 134 61.2
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 5.9e-34 150.2 132 58.3
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 1.7e-33 148.7 164 53.0
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 2.2e-33 148.3 658 71.4
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 2.2e-33 148.3 163 52.1
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 5.0e-33 147.1 134 56.0
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 2.5e-32 144.8 186 48.4
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 4.2e-32 144.1 140 55.7
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 2.1e-31 141.7 123 56.1
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 3.6e-31 141.0 142 50.7
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 4.7e-31 140.6 623 73.2
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 6.1e-31 140.2 124 58.1
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 1.0e-30 139.4 168 47.6
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.0e-30 139.4 158 50.6
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 4.0e-30 137.5 116 60.3
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 8.8e-30 136.3 660 69.5
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 1.5e-29 135.6 256 38.3
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 1.3e-28 132.5 184 45.1
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 2.4e-27 128.3 198 39.4
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 5.3e-27 127.1 155 49.0
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.0e-25 122.9 91 62.6
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.8e-25 120.9 150 41.3
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 8.5e-25 119.8 141 44.0
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 7.2e-24 116.7 142 45.1
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 9.4e-24 116.3 148 44.6
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.3e-20 105.9 102 49.0
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 8.3e-20 103.2 76 64.5
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 1.1e-19 102.8 92 54.3
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 1.4e-19 102.4 107 50.5
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 5.4e-19 100.5 133 44.4
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 9.1e-19 99.8 81 56.8
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 1.7e-17 95.5 243 28.4
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.0e-14 86.3 179 31.8
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 1.4e-14 85.9 156 34.6
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 2.3e-14 85.1 93 47.3
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 2.3e-14 85.1 93 47.3
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 2.3e-14 85.1 81 55.6
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 8.9e-14 83.2 196 28.1
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 5.7e-13 80.5 68 55.9
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.6e-10 72.4 57 57.9
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 1.0e-09 69.7 72 51.4


User provided reference genes

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