Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 3.8e-43 178.3 132 100.0
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.1e-15 87.0 149 44.3
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 6.3e-14 81.3 94 52.1
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.8e-13 79.7 144 38.9
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.8e-13 79.7 142 41.5
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 4.5e-12 75.1 135 39.3
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.0e-11 73.9 148 37.2
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 1.7e-11 73.2 126 39.7
AUR62023067 Chenopodium quinoa HOM05D007629 ORTHO05D009511 2.9e-11 72.4 135 57.0
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 3.8e-11 72.0 104 48.1
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 5.0e-11 71.6 110 46.4
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 8.5e-11 70.9 145 39.3
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 1.1e-10 70.5 96 50.0
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 3.2e-10 68.9 82 47.6
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 4.2e-10 68.6 88 46.6
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 7.2e-10 67.8 77 50.6
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 9.4e-10 67.4 76 50.0
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 1.2e-09 67.0 109 43.1
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.2e-09 67.0 82 47.6
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.6e-09 66.6 141 37.6
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 2.1e-09 66.2 91 45.1
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 2.1e-09 66.2 84 50.0
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 3.6e-09 65.5 103 44.7
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 3.6e-09 65.5 130 34.6
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 8.0e-09 64.3 133 35.3
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 1.0e-08 63.9 94 47.9
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 1.0e-08 63.9 117 39.3
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.0e-08 63.9 121 34.7
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 1.8e-08 63.2 82 45.1
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.8e-08 63.2 81 44.4
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 3.0e-08 62.4 100 43.0
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 4.0e-08 62.0 89 46.1
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 4.0e-08 62.0 94 46.8
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 5.2e-08 61.6 81 51.9
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 5.2e-08 61.6 92 46.7
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 2.0e-07 59.7 75 48.0
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 2.6e-07 59.3 86 40.7
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 3.3e-07 58.9 96 39.6
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 5.7e-07 58.2 89 46.1
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 5.7e-07 58.2 136 33.1
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 5.7e-07 58.2 98 44.9
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 7.5e-07 57.8 103 41.7
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 9.7e-07 57.4 100 38.0
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 1.3e-06 57.0 105 41.0
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.7e-06 56.6 95 41.1
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.7e-06 56.6 104 38.5
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 2.2e-06 56.2 129 32.6
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 2.2e-06 56.2 133 33.1
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 3.7e-06 55.5 84 40.5
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.8e-06 55.1 105 40.0
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 6.3e-06 54.7 138 30.4
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 8.2e-06 54.3 109 35.8
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 8.2e-06 54.3 91 41.8


User provided reference genes

Program Settings