Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g038320 Amaranthus hybridus HOM05D004282 ORTHO05D006804 0.0e+00 1091.6 536 100.0
AUR62023137 Chenopodium quinoa HOM05D004282 ORTHO05D006804 5.1e-296 1020.4 536 92.5
AUR62009455 Chenopodium quinoa HOM05D004282 ORTHO05D006804 6.6e-296 1020.0 536 92.4
EL10Ac2g04411 Beta vulgaris HOM05D004282 ORTHO05D006804 7.3e-295 1016.5 536 91.8
Hund14799 Selenicereus undatus HOM05D004282 ORTHO05D006804 1.9e-271 938.7 540 84.6
Sc01g0009620 Simmondsia chinensis HOM05D004282 ORTHO05D006804 1.5e-268 929.1 536 84.1
RcHm_v2.0_Chr7g0219471 Rosa chinensis HOM05D004282 ORTHO05D006804 3.3e-263 911.4 536 82.6
MELO3C005680.2 Cucumis melo HOM05D004282 ORTHO05D006804 1.6e-262 909.1 536 81.7
Rhsim02G0231700 Rhododendron simsii HOM05D004282 ORTHO05D006804 2.2e-262 908.7 537 82.7
TAR375G0364 Trochodendron aralioides HOM05D004282 ORTHO05D006804 2.8e-262 908.3 536 82.3
Prupe.5G100800 Prunus persica HOM05D004282 ORTHO05D006804 6.3e-262 907.1 536 81.7
Aqoxy7G00313 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 8.2e-262 906.7 536 82.1
CsaV3_5G002770 Cucumis sativus L. HOM05D004282 ORTHO05D006804 8.2e-262 906.7 536 81.3
FvH4_5g27720 Fragaria vesca HOM05D004282 ORTHO05D006804 1.4e-261 906.0 536 81.9
DCAR_006738 Daucus carota HOM05D004282 ORTHO05D006804 2.4e-261 905.2 536 82.3
DCAR_006739 Daucus carota HOM05D004282 ORTHO05D006804 2.4e-261 905.2 536 82.3
HanXRQChr13g0394231 Helianthus annuus HOM05D004282 ORTHO05D006804 3.1e-261 904.8 536 81.9
MD14G1105600 Malus domestica HOM05D004282 ORTHO05D006804 5.3e-261 904.0 536 81.2
Aqoxy2G03117 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 6.9e-261 903.7 536 81.7
FAN08G1277 Fragaria x ananassa HOM05D004282 ORTHO05D006804 9.0e-261 903.3 536 81.7
arahy.Tifrunner.gnm1.ann1.G1AAHV Arachis hypogaea HOM05D004282 ORTHO05D006804 1.2e-260 902.9 536 81.7
TAR374G0019 Trochodendron aralioides HOM05D004282 ORTHO05D006804 1.5e-260 902.5 536 81.9
Nn6g33428 Nelumbo nucifera HOM05D004282 ORTHO05D006804 2.0e-260 902.1 536 81.5
PGR042G2758 Punica granatum HOM05D004282 ORTHO05D006804 2.0e-260 902.1 536 81.0
Duzib068G0684 Durio zibethinus HOM05D004282 ORTHO05D006804 2.6e-260 901.7 536 80.8
ClCG01G002660 Citrullus lanatus HOM05D004282 ORTHO05D006804 3.4e-260 901.4 536 80.8
MD06G1084500 Malus domestica HOM05D004282 ORTHO05D006804 3.4e-260 901.4 536 81.2
Lj8A221T67 Lonicera japonica HOM05D004282 ORTHO05D006804 4.5e-260 901.0 536 81.7
FAN18G3468 Fragaria x ananassa HOM05D004282 ORTHO05D006804 7.7e-260 900.2 543 81.0
Lalb_Chr05g0224721 Lupinus albus HOM05D004282 ORTHO05D006804 1.3e-259 899.4 536 81.9
arahy.Tifrunner.gnm1.ann1.4VFV1G Arachis hypogaea HOM05D004282 ORTHO05D006804 2.2e-259 898.7 536 81.2
Eucgr.E00626 Eucalyptus grandis HOM05D004282 ORTHO05D006804 2.2e-259 898.7 536 81.3
Actinidia02002 Actinidia chinensis HOM05D004282 ORTHO05D006804 2.9e-259 898.3 536 81.5
CiPaw.11G134600 Carya illinoinensis HOM05D004282 ORTHO05D006804 3.8e-259 897.9 537 81.4
FAN04G0421 Fragaria x ananassa HOM05D004282 ORTHO05D006804 6.5e-259 897.1 536 81.3
FAN13G2512 Fragaria x ananassa HOM05D004282 ORTHO05D006804 6.5e-259 897.1 536 81.3
Gohir.A03G016700 Gossypium hirsutum HOM05D004282 ORTHO05D006804 8.5e-259 896.7 536 80.2
QL12p032840 Quercus lobata HOM05D004282 ORTHO05D006804 8.5e-259 896.7 535 81.1
Thecc.03G279500 Theobroma cacao HOM05D004282 ORTHO05D006804 8.5e-259 896.7 536 80.0
Gorai.003G158400 Gossypium raimondii HOM05D004282 ORTHO05D006804 1.4e-258 896.0 536 80.2
Sed0021454 Sechium edule HOM05D004282 ORTHO05D006804 3.2e-258 894.8 536 80.0
PSO782G4766 Papaver somniferum HOM05D004282 ORTHO05D006804 5.5e-258 894.0 534 81.3
Ca_17527_v3 Cicer arietinum L. HOM05D004282 ORTHO05D006804 9.4e-258 893.3 536 80.4
Lsat_1_v5_gn_6_6601 Lactuca sativa HOM05D004282 ORTHO05D006804 1.2e-257 892.9 536 81.5
Dinv37635 Davidia involucrata HOM05D004282 ORTHO05D006804 1.6e-257 892.5 536 80.8
Gohir.D03G151200 Gossypium hirsutum HOM05D004282 ORTHO05D006804 1.6e-257 892.5 536 79.9
PSO478G3502 Papaver somniferum HOM05D004282 ORTHO05D006804 1.6e-257 892.5 534 81.1
Cfa012224 Carpinus fangiana HOM05D004282 ORTHO05D006804 2.1e-257 892.1 537 80.6
DCAR_008399 Daucus carota HOM05D004282 ORTHO05D006804 2.1e-257 892.1 536 80.8
Lsat_1_v5_gn_3_6581 Lactuca sativa HOM05D004282 ORTHO05D006804 2.1e-257 892.1 536 80.4
CANSAT21G1770 Cannabis sativa HOM05D004282 ORTHO05D006804 2.7e-257 891.7 536 79.9
HanXRQChr06g0165861 Helianthus annuus HOM05D004282 ORTHO05D006804 3.6e-257 891.3 534 80.3
COL.COLO4_34472 Corchorus olitorius HOM05D004282 ORTHO05D006804 4.6e-257 891.0 536 79.9
Gohir.D08G201400 Gossypium hirsutum HOM05D004282 ORTHO05D006804 1.0e-256 889.8 536 79.7
THA.LOC104809396 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 1.4e-256 889.4 536 80.4
CSS0007959 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 2.3e-256 888.6 536 80.2
CSS0014359 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 2.3e-256 888.6 536 80.2
Duzib084G1154 Durio zibethinus HOM05D004282 ORTHO05D006804 3.0e-256 888.3 536 79.5
CARHR047680 Cardamine hirsuta HOM05D004282 ORTHO05D006804 3.9e-256 887.9 536 80.0
Glyma.05G208400 Glycine max HOM05D004282 ORTHO05D006804 1.5e-255 885.9 537 80.3
Hma1.2p1_0209F.1_g088780 Hydrangea macrophylla HOM05D004282 ORTHO05D006804 1.5e-255 885.9 535 80.7
VMungo0251G3615 Vigna mungo HOM05D004282 ORTHO05D006804 2.0e-255 885.6 536 79.9
Manes.02G019600 Manihot esculenta HOM05D004282 ORTHO05D006804 3.3e-255 884.8 536 79.1
THA.LOC104817993 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 3.3e-255 884.8 531 81.0
TWI60G0060 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 3.3e-255 884.8 536 79.3
Lj4g0008271 Lotus japonicus HOM05D004282 ORTHO05D006804 9.7e-255 883.2 536 79.1
TPR.G12833 Trifolium pratense HOM05D004282 ORTHO05D006804 1.3e-254 882.9 536 78.9
Thhalv10023408m.g Eutrema salsugineum HOM05D004282 ORTHO05D006804 1.7e-254 882.5 536 79.7
TWI81G0763 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 1.7e-254 882.5 536 78.7
MSTRG.11981 Avicennia marina HOM05D004282 ORTHO05D006804 2.2e-254 882.1 536 79.3
Sopen08g029450 Solanum pennellii HOM05D004282 ORTHO05D006804 4.8e-254 880.9 538 80.3
Sp2g01000 Schrenkiella parvula HOM05D004282 ORTHO05D006804 6.3e-254 880.6 536 79.5
C09p18660 Brassica napus HOM05D004282 ORTHO05D006804 1.1e-253 879.8 536 79.3
AL2G11570 Arabidopsis lyrata HOM05D004282 ORTHO05D006804 1.4e-253 879.4 536 79.3
Manes.08G013300 Manihot esculenta HOM05D004282 ORTHO05D006804 1.4e-253 879.4 530 80.2
Phvul.002G290100 Phaseolus vulgaris HOM05D004282 ORTHO05D006804 1.4e-253 879.4 536 79.5
Carub.0002s0119 Capsella rubella HOM05D004282 ORTHO05D006804 1.8e-253 879.0 536 79.1
PGSC0003DMG400012205 Solanum tuberosum HOM05D004282 ORTHO05D006804 2.4e-253 878.6 538 79.9
Solyc08g081150.4 Solanum lycopersicum HOM05D004282 ORTHO05D006804 6.9e-253 877.1 538 80.1
AT1G63660 Arabidopsis thaliana HOM05D004282 ORTHO05D006804 1.2e-252 876.3 536 79.1
Psat7g032640 Pisum sativum HOM05D004282 ORTHO05D006804 1.2e-252 876.3 536 78.5
Medtr8g098325 Medicago truncatula HOM05D004282 ORTHO05D006804 1.5e-252 875.9 536 78.2
Ciclev10019676m.g Citrus clementina HOM05D004282 ORTHO05D006804 2.0e-252 875.5 530 79.6
ECA233G0272 Erigeron canadensis HOM05D004282 ORTHO05D006804 4.5e-252 874.4 536 79.7
ECA246G1826 Erigeron canadensis HOM05D004282 ORTHO05D006804 4.5e-252 874.4 537 78.6
Atru.chr9.2181 Acer truncatum HOM05D004282 ORTHO05D006804 5.9e-252 874.0 530 78.7
Oeu019186.1 Olea europaea HOM05D004282 ORTHO05D006804 7.7e-252 873.6 536 78.0
Potri.003G128200 Populus trichocarpa HOM05D004282 ORTHO05D006804 1.3e-251 872.8 536 78.5
BolC9t54762H Brassica oleracea HOM05D004282 ORTHO05D006804 5.0e-251 870.9 536 78.9
Peaxi162Scf00119g00947 Petunia axillaris HOM05D004282 ORTHO05D006804 6.5e-251 870.5 531 80.6
CAN.G774.52 Capsicum annuum HOM05D004282 ORTHO05D006804 2.5e-250 868.6 532 79.9
Sabra03G0091200 Salix brachista HOM05D004282 ORTHO05D006804 1.2e-249 866.3 536 78.2
Gorai.004G212300 Gossypium raimondii HOM05D004282 ORTHO05D006804 2.7e-249 865.1 536 78.2
Aa31LG2G870 Aethionema arabicum HOM05D004282 ORTHO05D006804 4.7e-249 864.4 536 77.8
A09p15390 Brassica napus HOM05D004282 ORTHO05D006804 6.1e-249 864.0 536 78.5
BraA09t37181Z Brassica rapa HOM05D004282 ORTHO05D006804 7.9e-249 863.6 536 78.5
Cc08_g14800 Coffea canephora HOM05D004282 ORTHO05D006804 7.9e-249 863.6 536 78.0
Migut.A00734 Erythranthe guttata HOM05D004282 ORTHO05D006804 7.9e-249 863.6 536 77.4
Nitab4.5_0000678g0110 Nicotiana tabacum HOM05D004282 ORTHO05D006804 1.4e-248 862.8 558 77.8
SGA_v2.0_scaffold173G39175 Striga asiatica HOM05D004282 ORTHO05D006804 2.3e-248 862.1 537 77.7
Nitab4.5_0001615g0080 Nicotiana tabacum HOM05D004282 ORTHO05D006804 7.4e-247 857.1 558 77.1
Os08g0326600 Oryza sativa ssp. japonica HOM05D004282 ORTHO05D006804 3.5e-244 848.2 528 76.1
Zm00001eb434370 Zea mays HOM05D004282 ORTHO05D006804 4.5e-244 847.8 528 76.3
vmacro11363 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 3.2e-242 841.6 683 64.7
MBI17_g24637_MAGBIO Magnolia biondii HOM05D004282 ORTHO05D006804 1.4e-240 836.3 530 76.4
SHI07141 Sapria himalayana HOM05D004282 ORTHO05D006804 3.0e-240 835.1 530 76.0
unitig_578.g16628 Utricularia gibba HOM05D004282 ORTHO05D006804 1.1e-239 833.2 531 76.1
Haze_08786 Corylus avellana HOM05D004282 ORTHO05D006804 1.8e-237 825.9 496 80.6
Glyma.08G015000 Glycine max HOM05D004282 ORTHO05D006804 4.1e-237 824.7 498 80.7
GSVIVG01019748001 Vitis vinifera HOM05D004282 ORTHO05D006804 3.2e-234 815.1 536 75.0
vmacro22817 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 2.7e-233 812.0 667 64.5
Gohir.A08G182900 Gossypium hirsutum HOM05D004282 ORTHO05D006804 2.3e-232 808.9 494 78.7
Oeu009150.1 Olea europaea HOM05D004282 ORTHO05D006804 5.9e-228 794.3 540 72.4
ATR1101G056 Amborella trichopoda HOM05D004282 ORTHO05D006804 1.5e-226 789.6 560 69.1
AagrBONN_evm.TU.Sc2ySwM_344.3490 Anthoceros agrestis HOM05D004282 ORTHO05D006804 7.5e-223 777.3 535 68.8
Mapoly0002s0326 Marchantia polymorpha HOM05D004282 ORTHO05D006804 1.7e-219 766.1 533 68.5
Pp3c8_7320 Physcomitrium patens HOM05D004282 ORTHO05D006804 3.3e-218 761.9 528 68.4
CBR_g48399 Chara braunii HOM05D004282 ORTHO05D006804 5.7e-215 751.1 533 68.3
SMO116G0368 Selaginella moellendorffii HOM05D004282 ORTHO05D006804 2.5e-210 735.7 536 65.7
Lj2A0T39 Lonicera japonica HOM05D004282 ORTHO05D006804 1.2e-207 726.9 536 69.4
MCO08G312 Micromonas commoda HOM05D004282 ORTHO05D006804 2.5e-202 709.1 528 64.2
Cre02.g092900 Chlamydomonas reinhardtii HOM05D004282 ORTHO05D006804 5.2e-200 701.4 528 64.6
Lj2A185G23 Lonicera japonica HOM05D004282 ORTHO05D006804 5.4e-197 691.4 442 76.9
CDE06G0245 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 4.3e-194 681.8 403 79.9
PRCOL_00000667 Prasinoderma coloniale HOM05D004282 ORTHO05D006804 7.6e-191 671.0 526 62.0
HPP92_014989 Vanilla planifolia HOM05D004282 ORTHO05D006804 4.7e-185 651.7 493 64.5
BcaNung07334 Brassica carinata HOM05D004282 ORTHO05D006804 7.6e-183 644.4 374 81.6
CDE06G1269 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 3.6e-177 625.5 496 65.9
CiPaw.12G092600 Carya illinoinensis HOM05D004282 ORTHO05D006804 1.3e-158 563.9 415 68.0
Sabra01G0078200 Salix brachista HOM05D004282 ORTHO05D006804 1.1e-152 544.3 711 47.7
Cfa023610 Carpinus fangiana HOM05D004282 ORTHO05D006804 9.7e-138 494.6 537 51.4
Cpa.g.c40776 Carica papaya HOM05D004282 ORTHO05D006804 4.4e-130 469.2 300 76.3
SEGI_10668 Sequoiadendron giganteum HOM05D004282 ORTHO05D006804 1.5e-122 444.1 312 69.9
SMO165G0029 Selaginella moellendorffii HOM05D004282 ORTHO05D006804 2.4e-120 436.8 538 48.7
Pp3c3_31480 Physcomitrium patens HOM05D004282 ORTHO05D006804 1.2e-103 381.3 412 51.0
CDE02G0075 Ceratophyllum demersum HOM05D004282 ORTHO05D021217 1.4e-96 357.8 262 67.6
Cpa.g.sc74.54 Carica papaya HOM05D004282 ORTHO05D022242 1.9e-72 277.7 185 73.5
Actinidia14566 Actinidia chinensis HOM05D004282 ORTHO05D017169 3.5e-63 246.9 148 81.1
ECA233G3991 Erigeron canadensis HOM05D004282 ORTHO05D006804 2.1e-60 237.7 148 75.7
ATR0680G380 Amborella trichopoda HOM05D004282 ORTHO05D006804 2.4e-43 181.0 220 45.0
CDE02G2749 Ceratophyllum demersum HOM05D004282 ORTHO05D022242 3.2e-40 170.6 141 62.4
GSVIVG01010145001 Vitis vinifera HOM05D004282 ORTHO05D021217 1.5e-37 161.8 94 79.8
QL09p052209 Quercus lobata HOM05D004282 ORTHO05D022242 6.3e-36 156.4 104 72.1
ATR0680G421 Amborella trichopoda HOM05D004282 ORTHO05D021217 2.6e-34 151.0 108 71.3
CANSAT64G0187 Cannabis sativa HOM05D004282 ORTHO05D006804 3.4e-34 150.6 103 71.8
TAR633G2425 Trochodendron aralioides HOM05D004282 ORTHO05D022242 1.2e-18 99.0 93 61.3
TAR633G2043 Trochodendron aralioides HOM05D004282 ORTHO05D006540 3.3e-13 80.9 146 40.4
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 2.8e-12 77.8 45 80.0
Cc06_g21260 Coffea canephora HOM05D004282 ORTHO05D017169 3.7e-12 77.4 46 76.1
VMungo0464G0647 Vigna mungo HOM05D004282 ORTHO05D021217 1.1e-11 75.9 44 79.5
VMungo0540G0566 Vigna mungo HOM05D004282 ORTHO05D021217 1.1e-11 75.9 44 79.5
RcHm_v2.0_Chr1g0356411 Rosa chinensis HOM05D004282 ORTHO05D341678 1.4e-11 75.5 50 74.0
RcHm_v2.0_Chr1g0321151 Rosa chinensis HOM05D004282 ORTHO05D022242 9.1e-11 72.8 48 79.2
RcHm_v2.0_Chr7g0219111 Rosa chinensis HOM05D004282 ORTHO05D022242 2.2e-09 68.2 65 64.6
SGA_v2.0_scaffold43G16453 Striga asiatica HOM05D004282 ORTHO05D404191 9.4e-08 62.8 41 70.7
Glyma.13G255900 Glycine max HOM05D001661 ORTHO05D001575 4.0e-06 57.4 136 29.4
Phvul.006G201200 Phaseolus vulgaris HOM05D001661 ORTHO05D001575 8.8e-06 56.2 136 29.4


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