Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g037930 Amaranthus hybridus HOM05D006412 ORTHO05D008025 1.2e-36 156.0 77 100.0
Cpa.g.sc116.15 Carica papaya HOM05D006412 ORTHO05D008025 3.3e-07 58.2 30 90.0
AUR62023199 Chenopodium quinoa HOM05D006412 ORTHO05D008025 9.7e-07 56.6 29 89.7
AUR62026045 Chenopodium quinoa HOM05D006412 ORTHO05D008025 9.7e-07 56.6 29 89.7
AUR62032836 Chenopodium quinoa HOM05D006412 ORTHO05D008025 9.7e-07 56.6 29 89.7
Lj2A436G33 Lonicera japonica HOM05D006412 ORTHO05D008025 9.7e-07 56.6 29 89.7
Lj2g0003354 Lotus japonicus HOM05D006412 ORTHO05D008025 9.7e-07 56.6 29 89.7
THA.LOC104822436 Tarenaya hassleriana HOM05D006412 ORTHO05D008025 9.7e-07 56.6 29 89.7
Dinv14869 Davidia involucrata HOM05D006412 ORTHO05D008025 1.3e-06 56.2 29 86.2
HanXRQChr09g0262341 Helianthus annuus HOM05D006412 ORTHO05D008025 1.3e-06 56.2 29 86.2
ECA232G0076 Erigeron canadensis HOM05D006412 ORTHO05D008025 1.7e-06 55.8 33 78.8
Phvul.004G001300 Phaseolus vulgaris HOM05D006412 ORTHO05D008025 1.7e-06 55.8 29 89.7
TPR.G25248 Trifolium pratense HOM05D006412 ORTHO05D008025 1.7e-06 55.8 30 83.3
GSVIVG01030886001 Vitis vinifera HOM05D006412 ORTHO05D008025 1.7e-06 55.8 32 81.2
AL2G22970 Arabidopsis lyrata HOM05D006412 ORTHO05D008025 2.2e-06 55.5 29 86.2
AT1G66520 Arabidopsis thaliana HOM05D006412 ORTHO05D008025 2.2e-06 55.5 29 86.2
Carub.0002s1254 Capsella rubella HOM05D006412 ORTHO05D008025 2.2e-06 55.5 29 86.2
Cc07_g08250 Coffea canephora HOM05D006412 ORTHO05D008025 2.2e-06 55.5 29 86.2
Glyma.05G001000 Glycine max HOM05D006412 ORTHO05D008025 2.2e-06 55.5 29 86.2
Atru.chr1.1777 Acer truncatum HOM05D006412 ORTHO05D008025 2.8e-06 55.1 32 81.2
CSS0049075 Camellia sinensis var. sinensis HOM05D006412 ORTHO05D008025 2.8e-06 55.1 29 86.2
VMungo0464G0110 Vigna mungo HOM05D006412 ORTHO05D008025 2.8e-06 55.1 29 86.2
Medtr6g003980 Medicago truncatula HOM05D006412 ORTHO05D008025 3.7e-06 54.7 29 86.2
Oeu030807.1 Olea europaea HOM05D006412 ORTHO05D008025 3.7e-06 54.7 29 82.8
Sc11g0008580 Simmondsia chinensis HOM05D006412 ORTHO05D008025 3.7e-06 54.7 29 86.2
Migut.L00473 Erythranthe guttata HOM05D006412 ORTHO05D008025 4.8e-06 54.3 29 82.8
BcaB03g15262 Brassica carinata HOM05D006412 ORTHO05D008025 6.3e-06 53.9 29 82.8
BraA07t30973Z Brassica rapa HOM05D006412 ORTHO05D008025 6.3e-06 53.9 29 82.8
CANSAT78G1038 Cannabis sativa HOM05D006412 ORTHO05D008025 6.3e-06 53.9 29 82.8
Ciclev10013714m.g Citrus clementina HOM05D006412 ORTHO05D008025 6.3e-06 53.9 29 86.2
FvH4_2g04020 Fragaria vesca HOM05D006412 ORTHO05D008025 6.3e-06 53.9 32 71.9
FAN24G3364 Fragaria x ananassa HOM05D006412 ORTHO05D008025 6.3e-06 53.9 32 71.9
MD09G1260600 Malus domestica HOM05D006412 ORTHO05D008025 6.3e-06 53.9 32 78.1
RcHm_v2.0_Chr3g0491591 Rosa chinensis HOM05D006412 ORTHO05D008025 6.3e-06 53.9 32 75.0
RcHm_v2.0_Chr3g0493551 Rosa chinensis HOM05D006412 ORTHO05D008025 6.3e-06 53.9 32 75.0
Lsat_1_v5_gn_4_154881 Lactuca sativa HOM05D006412 ORTHO05D008025 8.2e-06 53.5 29 82.8
SalBow3G1843 Salvia bowleyana HOM05D006412 ORTHO05D008025 8.2e-06 53.5 29 86.2


User provided reference genes

Program Settings