Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g035280 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.1e-67 258.8 127 100.0
Ah.10g035200 Amaranthus hybridus HOM05D006716 ORTHO05D008396 4.0e-66 254.6 127 98.4
Ah.10g035270 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.2e-54 216.5 124 87.9
Ah.10g035350 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.2e-54 216.5 124 87.9
Ca_24998_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.1e-20 103.6 122 47.5
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 3.3e-20 102.1 127 45.7
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 5.7e-20 101.3 119 46.2
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 6.3e-19 97.8 129 48.1
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.4e-18 95.9 117 49.6
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 2.4e-18 95.9 114 47.4
Ah.10g035360 Amaranthus hybridus HOM05D006716 ORTHO05D008396 2.6e-17 92.4 84 59.5
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 1.3e-16 90.1 121 47.1
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 1.2e-14 83.6 87 52.9
DCAR_002644 Daucus carota HOM05D006716 ORTHO05D008396 4.6e-14 81.6 116 44.8
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 1.1e-12 77.0 123 43.1
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 1.7e-11 73.2 94 48.9
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 1.1e-10 70.5 117 38.5
CAN.G497.70 Capsicum annuum HOM05D006716 ORTHO05D008396 1.1e-10 70.5 113 41.6
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 3.1e-10 68.9 122 36.9
DCAR_001902 Daucus carota HOM05D006716 ORTHO05D008396 4.1e-10 68.6 136 39.0
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 4.1e-10 68.6 114 43.0
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 4.1e-10 68.6 122 38.5
Solyc02g082590.3 Solanum lycopersicum HOM05D006716 ORTHO05D008396 5.3e-10 68.2 112 39.3
Psat1g146440 Pisum sativum HOM05D006716 ORTHO05D008396 9.1e-10 67.4 98 45.9
Nitab4.5_0007530g0040 Nicotiana tabacum HOM05D006716 ORTHO05D008396 2.0e-09 66.2 123 39.8
Sopen02g027280 Solanum pennellii HOM05D006716 ORTHO05D008396 2.0e-09 66.2 112 38.4
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 4.5e-09 65.1 115 37.4
Peaxi162Scf00475g00024 Petunia axillaris HOM05D006716 ORTHO05D008396 1.0e-08 63.9 114 39.5
EL10Ac9g20945 Beta vulgaris HOM05D006716 ORTHO05D008396 1.3e-08 63.5 119 38.7
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 2.9e-08 62.4 78 46.2
Peaxi162Scf00226g00715 Petunia axillaris HOM05D006716 ORTHO05D008396 8.5e-08 60.8 112 38.4
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 2.1e-06 56.2 83 41.0
Peaxi162Scf00168g01520 Petunia axillaris HOM05D006716 ORTHO05D008396 2.7e-06 55.8 77 46.8
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 3.6e-06 55.5 104 33.7


User provided reference genes

Program Settings