Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g035270 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.3e-123 446.4 222 100.0
Ah.10g035350 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.3e-123 446.4 222 100.0
Ah.10g035280 Amaranthus hybridus HOM05D006716 ORTHO05D008396 3.6e-54 215.7 124 87.9
Ah.10g035200 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.4e-53 213.8 124 87.1
TPR.G15037 Trifolium pratense HOM05D006716 ORTHO05D008396 2.5e-47 193.0 224 46.0
Ca_24998_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 1.4e-45 187.2 216 45.4
TPR.G40231 Trifolium pratense HOM05D006716 ORTHO05D008396 1.8e-45 186.8 226 47.3
TPR.G36640 Trifolium pratense HOM05D006716 ORTHO05D008396 5.2e-45 185.3 218 47.7
Ah.10g035290 Amaranthus hybridus HOM05D006716 ORTHO05D008396 8.3e-43 177.9 97 88.7
TWI31G0239 Tripterygium wilfordii HOM05D006716 ORTHO05D008396 1.1e-42 177.6 219 42.9
Medtr5g064160 Medicago truncatula HOM05D006716 ORTHO05D008396 3.3e-39 166.0 241 42.3
Medtr5g464730 Medicago truncatula HOM05D006716 ORTHO05D008396 1.6e-38 163.7 184 48.9
Nitab4.5_0001339g0090 Nicotiana tabacum HOM05D006716 ORTHO05D008396 2.8e-38 162.9 222 42.3
Ah.10g035300 Amaranthus hybridus HOM05D006716 ORTHO05D008396 3.1e-37 159.5 212 43.4
DCAR_002644 Daucus carota HOM05D006716 ORTHO05D008396 5.2e-37 158.7 213 45.5
Ah.10g035360 Amaranthus hybridus HOM05D006716 ORTHO05D008396 1.3e-35 154.1 179 46.9
Nitab4.5_0007530g0040 Nicotiana tabacum HOM05D006716 ORTHO05D008396 1.7e-35 153.7 223 42.2
Peaxi162Scf00475g00124 Petunia axillaris HOM05D006716 ORTHO05D008396 1.9e-34 150.2 213 43.2
SGA_v2.0_scaffold50G18515 Striga asiatica HOM05D006716 ORTHO05D008396 1.9e-34 150.2 225 41.3
Peaxi162Scf00475g00024 Petunia axillaris HOM05D006716 ORTHO05D008396 1.2e-33 147.5 212 42.0
Manes.S095408 Manihot esculenta HOM05D006716 ORTHO05D008396 1.6e-33 147.1 226 40.3
Sopen02g027470 Solanum pennellii HOM05D006716 ORTHO05D008396 2.7e-33 146.4 221 39.8
Solyc02g082590.3 Solanum lycopersicum HOM05D006716 ORTHO05D008396 7.8e-33 144.8 216 40.3
Sopen02g027280 Solanum pennellii HOM05D006716 ORTHO05D008396 1.0e-32 144.4 216 39.8
Solyc02g082720.4 Solanum lycopersicum HOM05D006716 ORTHO05D008396 8.6e-32 141.4 221 39.4
Peaxi162Scf00168g01523 Petunia axillaris HOM05D006716 ORTHO05D008396 1.5e-31 140.6 182 42.3
CAN.G497.70 Capsicum annuum HOM05D006716 ORTHO05D008396 3.1e-29 132.9 214 39.7
Peaxi162Scf00168g01520 Petunia axillaris HOM05D006716 ORTHO05D008396 3.8e-27 125.9 182 40.1
Peaxi162Scf00663g00027 Petunia axillaris HOM05D006716 ORTHO05D008396 9.2e-26 121.3 182 39.6
Peaxi162Scf00663g00009 Petunia axillaris HOM05D006716 ORTHO05D008396 1.6e-25 120.6 216 35.2
Rhsim02G0098700 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.6e-25 120.6 225 34.7
CAN.G497.65 Capsicum annuum HOM05D006716 ORTHO05D008396 1.3e-24 117.5 183 36.6
Peaxi162Scf00226g00715 Petunia axillaris HOM05D006716 ORTHO05D008396 1.7e-24 117.1 190 40.0
Rhsim02G0098800 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.7e-24 117.1 185 38.4
vmacro15749 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 3.0e-24 116.3 218 35.3
Aqoxy4G01948 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 8.6e-24 114.8 220 35.5
vmacro12393 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.9e-23 113.6 180 38.9
CAN.G497.60 Capsicum annuum HOM05D006716 ORTHO05D008396 3.3e-23 112.8 187 36.4
DCAR_001902 Daucus carota HOM05D006716 ORTHO05D008396 4.3e-23 112.5 196 37.8
Peaxi162Scf00226g00716 Petunia axillaris HOM05D006716 ORTHO05D008396 1.6e-22 110.5 188 37.2
Hma1.2p1_0003F.1_g003620 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 6.2e-22 108.6 183 36.6
SGA_v2.0_scaffold57G20303 Striga asiatica HOM05D006716 ORTHO05D008396 1.4e-21 107.5 214 33.2
Hma1.2p1_0154F.1_g068000 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 2.4e-21 106.7 183 36.1
TPR.G12759 Trifolium pratense HOM05D006716 ORTHO05D008396 4.0e-21 105.9 190 40.0
Hma1.2p1_0003F.1_g003570 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 6.9e-21 105.1 181 34.8
Lj9A35T20 Lonicera japonica HOM05D006716 ORTHO05D008396 6.9e-21 105.1 173 37.6
Aqoxy4G01949 Aquilegia oxysepala HOM05D006716 ORTHO05D008396 8.9e-21 104.8 221 33.9
Rhsim01G0092600 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.2e-20 104.4 174 36.8
Rhsim01G0093700 Rhododendron simsii HOM05D000991 ORTHO05D008396 1.5e-20 104.0 181 36.5
Peaxi162Scf00038g00840 Petunia axillaris HOM05D006716 ORTHO05D008396 2.6e-20 103.2 178 37.1
TPR.G29566 Trifolium pratense HOM05D006716 ORTHO05D008396 4.4e-20 102.4 191 37.2
DCAR_001924 Daucus carota HOM05D006716 ORTHO05D008396 9.9e-20 101.3 197 37.1
vmacro12389 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.9e-19 99.8 176 35.8
Potri.018G001500 Populus trichocarpa HOM05D006716 ORTHO05D008396 6.4e-19 98.6 190 37.9
CSS0009954 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 8.4e-19 98.2 185 36.8
EL10Ac9g20945 Beta vulgaris HOM05D006716 ORTHO05D008396 1.9e-18 97.1 211 35.5
CSS0050127 Camellia sinensis var. sinensis HOM05D006716 ORTHO05D008396 3.5e-17 92.8 183 36.1
Duzib114G0505 Durio zibethinus HOM05D006716 ORTHO05D008396 4.6e-17 92.4 181 33.1
Duzib114G0950 Durio zibethinus HOM05D006716 ORTHO05D008396 7.8e-17 91.7 176 33.5
Duzib114G0358 Durio zibethinus HOM05D006716 ORTHO05D008396 1.0e-16 91.3 189 33.3
Rhsim01G0092700 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.7e-16 90.5 198 33.3
Rhsim01G0093800 Rhododendron simsii HOM05D006716 ORTHO05D008396 1.7e-16 90.5 198 33.3
vmacro15746 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 2.3e-16 90.1 133 37.6
Hma1.2p1_0310F.1_g120920 Hydrangea macrophylla HOM05D006716 ORTHO05D008396 1.1e-15 87.8 179 32.4
Rhsim01G0093600 Rhododendron simsii HOM05D006716 ORTHO05D008396 7.3e-15 85.1 189 33.9
vmacro12392 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 7.3e-15 85.1 130 37.7
Rhsim09G0048400 Rhododendron simsii HOM05D006716 ORTHO05D008396 9.6e-15 84.7 191 32.5
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 2.8e-14 83.2 221 30.8
Duzib114G0774 Durio zibethinus HOM05D006716 ORTHO05D008396 3.6e-14 82.8 177 32.8
CAN.G497.57 Capsicum annuum HOM05D006716 ORTHO05D008396 4.8e-14 82.4 92 41.3
Lj9A35T22 Lonicera japonica HOM05D006716 ORTHO05D008396 1.1e-13 81.3 181 31.5
Manes.11G055432 Manihot esculenta HOM05D006716 ORTHO05D008396 1.1e-13 81.3 111 38.7
vmacro15747 Vaccinium macrocarpon HOM05D006716 ORTHO05D008396 1.8e-13 80.5 157 33.8
SGA_v2.0_scaffold237G43860 Striga asiatica HOM05D006716 ORTHO05D008396 5.3e-13 79.0 187 28.9
Peaxi162Scf00226g00717 Petunia axillaris HOM05D006716 ORTHO05D008396 6.9e-13 78.6 140 37.9
Rhsim07G0026700 Rhododendron simsii HOM05D006716 ORTHO05D008396 6.9e-13 78.6 191 31.9
Potri.018G001550 Populus trichocarpa HOM05D006716 ORTHO05D008396 4.5e-12 75.9 173 32.4
Manes.04G051500 Manihot esculenta HOM05D006716 ORTHO05D008396 9.9e-12 74.7 110 37.3
DCAR_010103 Daucus carota HOM05D006716 ORTHO05D008396 1.7e-11 73.9 108 45.4
SGA_v2.0_scaffold57G20300 Striga asiatica HOM05D006716 ORTHO05D008396 2.2e-11 73.6 127 31.5
DCAR_001904 Daucus carota HOM05D006716 ORTHO05D008396 3.8e-11 72.8 102 34.3
Psat1g146440 Pisum sativum HOM05D006716 ORTHO05D008396 1.4e-10 70.9 99 45.5
DCAR_001166 Daucus carota HOM05D006716 ORTHO05D008396 3.0e-08 63.2 79 48.1
Ca_25012_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 3.9e-08 62.8 96 33.3
Os07g0665700 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 5.1e-08 62.4 96 37.5
CAN.G679.10 Capsicum annuum HOM05D001437 ORTHO05D001297 6.7e-08 62.0 219 26.5
PSO478G1238 Papaver somniferum HOM05D006716 ORTHO05D008396 1.5e-07 60.8 177 29.4
Os07g0665300 Oryza sativa ssp. japonica HOM05D013536 ORTHO05D018072 2.5e-07 60.1 96 36.5
DCAR_024034 Daucus carota HOM05D006716 ORTHO05D008396 9.6e-07 58.2 192 28.1
Os01g0278600 Oryza sativa ssp. japonica HOM05D006716 ORTHO05D008396 2.1e-06 57.0 127 30.7
Ca_25001_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 2.8e-06 56.6 78 35.9
Os03g0663100 Oryza sativa ssp. japonica HOM05D011092 ORTHO05D296914 2.8e-06 56.6 110 31.8
Ca_25017_v3 Cicer arietinum L. HOM05D006716 ORTHO05D008396 3.6e-06 56.2 89 43.8
Peaxi162Scf01072g00410 Petunia axillaris HOM05D006716 ORTHO05D008396 3.6e-06 56.2 133 27.1
PSO478G4756 Papaver somniferum HOM05D006716 ORTHO05D008396 8.1e-06 55.1 188 28.2


User provided reference genes

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