Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 9.7e-68 260.0 130 100.0
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 9.1e-58 226.9 126 85.7
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 9.5e-55 216.9 129 82.2
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 9.2e-50 200.3 128 73.4
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 2.7e-49 198.7 111 84.7
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 2.3e-40 169.1 109 67.9
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 3.9e-40 168.3 128 61.7
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 8.6e-40 167.2 109 67.9
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.5e-39 166.4 128 60.9
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 3.3e-39 165.2 128 58.6
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 3.3e-39 165.2 122 63.1
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 4.3e-39 164.9 112 67.0
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 5.6e-39 164.5 128 61.7
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.6e-38 162.9 107 68.2
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 1.6e-38 162.9 111 67.6
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 2.1e-38 162.5 137 60.6
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 2.8e-38 162.2 113 65.5
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 2.8e-38 162.2 108 67.6
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 4.7e-38 161.4 112 62.5
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 4.7e-38 161.4 114 63.2
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 8.0e-38 160.6 116 63.8
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 8.0e-38 160.6 116 63.8
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 8.0e-38 160.6 120 61.7
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 8.0e-38 160.6 129 56.6
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 1.4e-37 159.8 129 62.8
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.8e-37 159.5 116 65.5
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 1.8e-37 159.5 113 62.8
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 1.8e-37 159.5 108 66.7
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 4.0e-37 158.3 126 58.7
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 4.0e-37 158.3 123 61.0
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 5.2e-37 157.9 127 59.1
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 6.8e-37 157.5 113 66.4
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 8.9e-37 157.1 126 60.3
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.2e-36 156.8 117 61.5
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 1.2e-36 156.8 129 58.1
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 1.2e-36 156.8 100 72.0
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 1.5e-36 156.4 125 59.2
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 1.5e-36 156.4 103 68.9
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 1.5e-36 156.4 129 58.9
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 2.0e-36 156.0 103 68.9
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 2.0e-36 156.0 118 61.0
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 2.6e-36 155.6 114 63.2
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 2.6e-36 155.6 109 64.2
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 4.4e-36 154.8 113 63.7
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 4.4e-36 154.8 115 64.3
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 4.4e-36 154.8 120 57.5
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 7.5e-36 154.1 125 57.6
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 9.8e-36 153.7 111 64.0
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 9.8e-36 153.7 115 63.5
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.3e-35 153.3 113 63.7
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 1.3e-35 153.3 100 71.0
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.2e-35 152.5 129 56.6
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.9e-35 152.1 114 59.6
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 2.9e-35 152.1 114 59.6
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.9e-35 152.1 130 53.8
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 3.7e-35 151.8 109 62.4
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 8.3e-35 150.6 114 58.8
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 8.3e-35 150.6 114 62.3
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 8.3e-35 150.6 103 63.1
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.4e-34 149.8 114 62.3
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.4e-34 149.8 106 60.4
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 1.9e-34 149.4 126 61.9
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.9e-34 149.4 105 66.7
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 1.9e-34 149.4 117 58.1
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 2.4e-34 149.1 126 56.3
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 2.4e-34 149.1 103 62.1
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 3.2e-34 148.7 134 53.7
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 4.1e-34 148.3 114 58.8
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 9.2e-34 147.1 100 67.0
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 2.1e-33 146.0 124 54.0
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 2.7e-33 145.6 103 64.1
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.7e-32 142.9 103 62.1
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 3.0e-32 142.1 110 57.3
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 1.1e-31 140.2 124 52.4
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 1.5e-31 139.8 110 60.9
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 9.5e-31 137.1 112 59.8
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 1.6e-30 136.3 125 52.0
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 3.6e-30 135.2 93 66.7
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 4.7e-30 134.8 95 64.2
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 1.4e-29 133.3 93 66.7
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 1.4e-29 133.3 96 62.5
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 4.0e-29 131.7 93 65.6
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 4.0e-29 131.7 126 50.0
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 3.4e-28 128.6 96 58.3
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.3e-27 126.7 100 57.0
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 2.2e-27 125.9 117 49.6
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 4.9e-27 124.8 107 56.1
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 4.9e-27 124.8 108 53.7
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 1.1e-26 123.6 86 65.1
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 2.7e-25 119.0 128 49.2
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 3.0e-24 115.5 190 37.4
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.5e-23 112.5 116 48.3
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.3e-23 112.1 96 52.1
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 2.8e-22 109.0 113 50.4
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 4.7e-22 108.2 76 61.8
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 8.1e-22 107.5 80 61.2
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.2e-20 103.6 73 63.0
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 1.5e-20 103.2 106 45.3
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 5.8e-20 101.3 65 66.2
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 2.9e-19 99.0 96 46.9
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 1.9e-18 96.3 96 44.8
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 2.7e-17 92.4 99 39.4
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 3.5e-17 92.0 80 52.5
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 1.1e-15 87.0 94 47.9
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 1.3e-14 83.6 105 41.0
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 3.4e-12 75.5 119 40.3
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 3.8e-11 72.0 47 70.2
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 1.6e-09 66.6 45 68.9
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 7.3e-07 57.8 48 56.2
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 2.8e-06 55.8 69 46.4


User provided reference genes

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