Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g033610 Amaranthus hybridus HOM05D004041 ORTHO05D004564 4.7e-184 649.0 817 100.0
EL10Ac2g03659 Beta vulgaris HOM05D004041 ORTHO05D004564 6.3e-72 276.6 378 59.5
AUR62020692 Chenopodium quinoa HOM05D004041 ORTHO05D004564 3.0e-66 257.7 382 49.2
AUR62028033 Chenopodium quinoa HOM05D004041 ORTHO05D004564 5.4e-63 246.9 381 45.7
Hund03240 Selenicereus undatus HOM05D004041 ORTHO05D004564 3.3e-60 237.7 252 55.6
Sc06g0000040 Simmondsia chinensis HOM05D004041 ORTHO05D004564 5.2e-50 203.8 219 55.3
Sc06g0001360 Simmondsia chinensis HOM05D004041 ORTHO05D004564 5.2e-50 203.8 219 55.3
Actinidia12476 Actinidia chinensis HOM05D004041 ORTHO05D004564 8.6e-45 186.4 208 53.4
Phvul.006G038688 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 3.3e-44 184.5 245 49.8
Thhalv10010217m.g Eutrema salsugineum HOM05D004041 ORTHO05D004564 9.5e-44 183.0 207 52.7
Ca_12887_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 1.6e-43 182.2 216 53.7
Lj1g0018267 Lotus japonicus HOM05D004041 ORTHO05D004564 1.6e-43 182.2 188 55.9
arahy.Tifrunner.gnm1.ann1.1H4CIU Arachis hypogaea HOM05D004041 ORTHO05D004564 2.8e-43 181.4 209 52.6
Nitab4.5_0000288g0130 Nicotiana tabacum HOM05D004041 ORTHO05D004564 3.6e-43 181.0 205 50.7
BraA06t24900Z Brassica rapa HOM05D004041 ORTHO05D004564 4.7e-43 180.6 145 64.1
Potri.006G233000 Populus trichocarpa HOM05D004041 ORTHO05D004564 8.1e-43 179.9 217 51.6
Sabra06G0181500 Salix brachista HOM05D004041 ORTHO05D004564 1.1e-42 179.5 218 51.8
Aa31LG4G18100 Aethionema arabicum HOM05D004041 ORTHO05D004564 1.8e-42 178.7 202 54.0
Aqoxy7G02570 Aquilegia oxysepala HOM05D004041 ORTHO05D004564 2.3e-42 178.3 203 55.2
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 3.1e-42 177.9 147 63.9
Manes.03G046500 Manihot esculenta HOM05D004041 ORTHO05D004564 3.1e-42 177.9 185 60.0
Phvul.001G088700 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 4.0e-42 177.6 212 53.8
A06p18110 Brassica napus HOM05D004041 ORTHO05D004564 5.2e-42 177.2 203 51.2
PGR119G2538 Punica granatum HOM05D004041 ORTHO05D004564 6.8e-42 176.8 207 52.7
MD08G1133100 Malus domestica HOM05D004041 ORTHO05D004564 1.5e-41 175.6 183 55.2
GSVIVG01035595001 Vitis vinifera HOM05D004041 ORTHO05D004564 1.5e-41 175.6 251 49.4
Prupe.1G463200 Prunus persica HOM05D004041 ORTHO05D004564 2.0e-41 175.3 208 54.3
Sp5g12500 Schrenkiella parvula HOM05D004041 ORTHO05D004564 2.0e-41 175.3 206 49.0
BcaC07g39425 Brassica carinata HOM05D004041 ORTHO05D004564 2.6e-41 174.9 206 50.5
Psat6g031640 Pisum sativum HOM05D004041 ORTHO05D004564 2.6e-41 174.9 173 57.8
MD15G1111100 Malus domestica HOM05D004041 ORTHO05D004564 3.4e-41 174.5 207 53.1
Lsat_1_v5_gn_4_74560 Lactuca sativa HOM05D004041 ORTHO05D004564 5.8e-41 173.7 152 59.9
Nitab4.5_0008752g0030 Nicotiana tabacum HOM05D004041 ORTHO05D004564 5.8e-41 173.7 188 52.1
AL5G29450 Arabidopsis lyrata HOM05D004041 ORTHO05D004564 7.5e-41 173.3 209 51.2
Glyma.14G131900 Glycine max HOM05D004041 ORTHO05D004564 9.8e-41 172.9 214 51.4
SalBow8G3032 Salvia bowleyana HOM05D004041 ORTHO05D004564 9.8e-41 172.9 204 51.0
VMungo1383G3608 Vigna mungo HOM05D004041 ORTHO05D004564 9.8e-41 172.9 215 52.6
BcaB01g00690 Brassica carinata HOM05D004041 ORTHO05D004564 2.2e-40 171.8 204 50.5
CARHR158630 Cardamine hirsuta HOM05D004041 ORTHO05D004564 2.9e-40 171.4 251 44.6
Solyc08g074440.4 Solanum lycopersicum HOM05D004041 ORTHO05D004564 2.9e-40 171.4 201 50.2
C08p24610 Brassica napus HOM05D004041 ORTHO05D004564 3.7e-40 171.0 204 51.0
BolC8t50077H Brassica oleracea HOM05D004041 ORTHO05D004564 3.7e-40 171.0 204 51.0
RcHm_v2.0_Chr6g0312381 Rosa chinensis HOM05D004041 ORTHO05D004564 3.7e-40 171.0 176 55.7
CiPaw.07G050600 Carya illinoinensis HOM05D004041 ORTHO05D004564 6.4e-40 170.2 208 51.0
PGSC0003DMG401029567 Solanum tuberosum HOM05D004041 ORTHO05D004564 6.4e-40 170.2 185 53.0
Cc03_g09420 Coffea canephora HOM05D004041 ORTHO05D004564 8.3e-40 169.9 263 44.1
HanXRQChr10g0299041 Helianthus annuus HOM05D004041 ORTHO05D004564 8.3e-40 169.9 209 52.2
Glyma.17G200600 Glycine max HOM05D004041 ORTHO05D004564 1.1e-39 169.5 215 50.2
Lalb_Chr11g0064071 Lupinus albus HOM05D004041 ORTHO05D004564 1.1e-39 169.5 213 47.9
TAR383G1094 Trochodendron aralioides HOM05D004041 ORTHO05D004564 1.1e-39 169.5 215 49.3
Eucgr.H02470 Eucalyptus grandis HOM05D004041 ORTHO05D004564 1.4e-39 169.1 218 50.5
Atru.chr4.1391 Acer truncatum HOM05D004041 ORTHO05D004564 2.4e-39 168.3 221 49.3
CiPaw.07G215400 Carya illinoinensis HOM05D004041 ORTHO05D004564 2.4e-39 168.3 256 47.7
CsaV3_2G031560 Cucumis sativus L. HOM05D004041 ORTHO05D004564 2.4e-39 168.3 219 48.9
Migut.E01401 Erythranthe guttata HOM05D004041 ORTHO05D004564 2.4e-39 168.3 208 49.0
FvH4_2g30620 Fragaria vesca HOM05D004041 ORTHO05D004564 2.4e-39 168.3 204 53.4
FAN24G0669 Fragaria x ananassa HOM05D004041 ORTHO05D004564 2.4e-39 168.3 204 53.4
Sopen08g023080 Solanum pennellii HOM05D004041 ORTHO05D004564 4.1e-39 167.5 185 53.0
ClCG08G012810 Citrullus lanatus HOM05D004041 ORTHO05D004564 5.4e-39 167.2 179 54.7
FAN27G0182 Fragaria x ananassa HOM05D004041 ORTHO05D004564 5.4e-39 167.2 208 53.4
THA.LOC104799001 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 5.4e-39 167.2 175 54.9
TWI15G0012 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 5.4e-39 167.2 214 50.0
FAN15G2764 Fragaria x ananassa HOM05D004041 ORTHO05D004564 7.1e-39 166.8 214 52.3
PSO210G2134 Papaver somniferum HOM05D004041 ORTHO05D004564 7.1e-39 166.8 150 62.0
PSO541G4756 Papaver somniferum HOM05D004041 ORTHO05D004564 7.1e-39 166.8 179 57.0
Peaxi162Scf00213g01515 Petunia axillaris HOM05D004041 ORTHO05D004564 7.1e-39 166.8 148 60.1
FAN20G2913 Fragaria x ananassa HOM05D004041 ORTHO05D004564 9.2e-39 166.4 208 53.4
AT3G49601 Arabidopsis thaliana HOM05D004041 ORTHO05D004564 1.2e-38 166.0 209 48.8
Sed0021561 Sechium edule HOM05D004041 ORTHO05D004564 1.2e-38 166.0 248 45.2
CSS0017741 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 2.7e-38 164.9 210 49.5
PSO832G4585 Papaver somniferum HOM05D004041 ORTHO05D004564 2.7e-38 164.9 150 63.3
TWI60G0712 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 3.5e-38 164.5 146 61.0
DCAR_004521 Daucus carota HOM05D004041 ORTHO05D004564 6.0e-38 163.7 183 54.1
Ciclev10007432m.g Citrus clementina HOM05D004041 ORTHO05D004564 7.8e-38 163.3 175 53.7
Ah.11g044190 Amaranthus hybridus HOM05D004041 ORTHO05D004564 5.1e-37 160.6 112 73.2
SGA_v2.0_scaffold121G33039 Striga asiatica HOM05D003985 ORTHO05D005253 1.1e-36 159.5 208 48.1
QL12p024601 Quercus lobata HOM05D004041 ORTHO05D004564 1.5e-36 159.1 252 46.8
Duzib128G1534 Durio zibethinus HOM05D004041 ORTHO05D004564 1.9e-36 158.7 149 60.4
ECA234G4028 Erigeron canadensis HOM05D004041 ORTHO05D004564 1.9e-36 158.7 209 46.9
Gohir.A06G171600 Gossypium hirsutum HOM05D004041 ORTHO05D004564 1.9e-36 158.7 149 60.4
Gorai.010G210300 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.9e-36 158.7 149 59.7
CAN.G195.14 Capsicum annuum HOM05D004041 ORTHO05D004564 2.5e-36 158.3 176 53.4
Gohir.D06G179700 Gossypium hirsutum HOM05D004041 ORTHO05D004564 2.5e-36 158.3 149 59.1
Lalb_Chr23g0268921 Lupinus albus HOM05D004041 ORTHO05D004564 7.3e-36 156.8 205 46.3
Thecc.10G127600 Theobroma cacao HOM05D004041 ORTHO05D004564 1.2e-35 156.0 149 59.7
Nitab4.5_0000648g0040 Nicotiana tabacum HOM05D004041 ORTHO05D004564 6.2e-35 153.7 174 49.4
MBI11_g09070_MAGBIO Magnolia biondii HOM05D004041 ORTHO05D004564 1.1e-34 152.9 231 45.9
COL.COLO4_09287 Corchorus olitorius HOM05D004041 ORTHO05D004564 3.1e-34 151.4 254 42.1
Thecc.10G128100 Theobroma cacao HOM05D004041 ORTHO05D004564 2.6e-33 148.3 149 58.4
Oeu026036.1 Olea europaea HOM05D004041 ORTHO05D004564 3.4e-33 147.9 111 67.6
Thecc.10G128300 Theobroma cacao HOM05D004041 ORTHO05D004564 3.4e-33 147.9 149 57.7
Duzib106G1246 Durio zibethinus HOM05D004041 ORTHO05D004564 5.8e-33 147.1 236 48.7
Lj8C415T2 Lonicera japonica HOM05D004041 ORTHO05D004564 7.6e-33 146.7 115 64.3
Pp3c3_10000 Physcomitrium patens HOM05D004041 ORTHO05D004564 7.6e-33 146.7 147 53.7
Medtr1g010100 Medicago truncatula HOM05D004041 ORTHO05D004564 9.9e-33 146.4 111 68.5
vmacro00640 Vaccinium macrocarpon HOM05D004041 ORTHO05D004564 9.9e-33 146.4 104 71.2
Mapoly0057s0059 Marchantia polymorpha HOM05D004041 ORTHO05D004564 1.7e-32 145.6 145 55.2
TPR.G10377 Trifolium pratense HOM05D004041 ORTHO05D004564 1.7e-32 145.6 110 69.1
ATR0665G601 Amborella trichopoda HOM05D004041 ORTHO05D004564 2.2e-32 145.2 236 41.1
Gohir.D06G179400 Gossypium hirsutum HOM05D004041 ORTHO05D004564 3.8e-32 144.4 149 56.4
Gorai.010G210000 Gossypium raimondii HOM05D004041 ORTHO05D004564 6.4e-32 143.7 149 55.7
Glyma.11G174282 Glycine max HOM05D004041 ORTHO05D004564 1.4e-31 142.5 116 64.7
TPR.G20436 Trifolium pratense HOM05D004041 ORTHO05D004564 1.9e-31 142.1 110 67.3
SEGI_30814 Sequoiadendron giganteum HOM05D004041 ORTHO05D004564 2.4e-31 141.7 175 47.4
CDE07G1163 Ceratophyllum demersum HOM05D004041 ORTHO05D004564 7.1e-31 140.2 214 44.9
Cpa.g.sc117.15 Carica papaya HOM05D004041 ORTHO05D004564 2.7e-30 138.3 119 58.0
THA.LOC109116738 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 2.7e-30 138.3 132 54.5
AagrBONN_evm.TU.Sc2ySwM_344.5195 Anthoceros agrestis HOM05D004041 ORTHO05D004564 3.5e-30 137.9 145 53.1
BcaC09g49964 Brassica carinata HOM05D004041 ORTHO05D004564 3.5e-30 137.9 183 49.2
CBR_g88579 Chara braunii HOM05D004041 ORTHO05D004564 4.6e-30 137.5 145 51.7
CSS0020148 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 1.3e-29 136.0 110 62.7
Nn5g27656 Nelumbo nucifera HOM05D004041 ORTHO05D004564 9.6e-28 129.8 110 63.6
RcHm_v2.0_Chr4g0410401 Rosa chinensis HOM05D004041 ORTHO05D004564 9.6e-28 129.8 91 68.1
Zm00001eb344480 Zea mays HOM05D004041 ORTHO05D004564 2.8e-27 128.3 214 41.6
C01p30700 Brassica napus HOM05D004041 ORTHO05D004564 5.2e-26 124.0 144 52.8
Zm00001eb204710 Zea mays HOM05D004041 ORTHO05D004564 1.5e-25 122.5 197 42.6
CANSAT21G2467 Cannabis sativa HOM05D004041 ORTHO05D004564 7.6e-25 120.2 173 50.3
TPR.G211 Trifolium pratense HOM05D004041 ORTHO05D004564 1.3e-24 119.4 97 64.9
Carub.0005s1594 Capsella rubella HOM05D004041 ORTHO05D004564 1.7e-24 119.0 209 41.6
Gohir.A06G171302 Gossypium hirsutum HOM05D004041 ORTHO05D004564 1.9e-23 115.5 129 54.3
TAR626G0117 Trochodendron aralioides HOM05D002987 ORTHO05D003359 4.2e-23 114.4 93 61.3
Migut.A00845 Erythranthe guttata HOM05D004041 ORTHO05D004564 7.1e-23 113.6 147 48.3
Migut.A00847 Erythranthe guttata HOM05D004041 ORTHO05D004564 7.1e-23 113.6 147 48.3
ATR0665G238 Amborella trichopoda HOM05D004041 ORTHO05D004564 3.5e-22 111.3 108 51.9
Cpa.g.c48129 Carica papaya HOM05D004041 ORTHO05D004564 6.0e-22 110.5 81 65.4
SalBow7G2142 Salvia bowleyana HOM05D004041 ORTHO05D004564 1.0e-21 109.8 102 55.9
Mapoly0057s0051 Marchantia polymorpha HOM05D004041 ORTHO05D004564 6.6e-21 107.1 122 50.8
MCO09G628 Micromonas commoda HOM05D004041 ORTHO05D004564 6.6e-21 107.1 161 46.0
Zm00001eb204800 Zea mays HOM05D004041 ORTHO05D004564 6.6e-21 107.1 108 56.5
Dinv37476 Davidia involucrata HOM05D000079 ORTHO05D000211 3.3e-20 104.8 158 45.6
Zm00001eb204790 Zea mays HOM05D004041 ORTHO05D004564 3.3e-20 104.8 112 50.9
Zm00001eb204730 Zea mays HOM05D004041 ORTHO05D004564 7.3e-20 103.6 109 51.4
Mapoly0018s0007 Marchantia polymorpha HOM05D004041 ORTHO05D004564 9.6e-20 103.2 101 55.4
Ca_11409_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 1.3e-19 102.8 113 56.6
Zm00001eb204830 Zea mays HOM05D004041 ORTHO05D004564 1.6e-19 102.4 111 50.5
Zm00001eb204770 Zea mays HOM05D004041 ORTHO05D004564 2.8e-19 101.7 107 52.3
Ca_11411_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 3.6e-19 101.3 113 56.6
Dinv09449 Davidia involucrata HOM05D003985 ORTHO05D005253 4.8e-19 100.9 159 44.7
Zm00001eb204810 Zea mays HOM05D004041 ORTHO05D004564 4.8e-19 100.9 108 50.9
Gohir.D06G179300 Gossypium hirsutum HOM05D004041 ORTHO05D004564 8.1e-19 100.1 99 57.6
Zm00001eb204750 Zea mays HOM05D004041 ORTHO05D004564 8.1e-19 100.1 105 51.4
Nn8g41252 Nelumbo nucifera HOM05D004041 ORTHO05D004564 1.1e-18 99.8 178 39.9
Zm00001eb204820 Zea mays HOM05D004041 ORTHO05D004564 1.1e-18 99.8 105 54.3
PRCOL_00006922 Prasinoderma coloniale HOM05D004041 ORTHO05D004564 4.5e-17 94.4 104 50.0
Gorai.010G209300 Gossypium raimondii HOM05D004041 ORTHO05D004564 7.6e-17 93.6 92 59.8
Rhsim07G0241300 Rhododendron simsii HOM05D004041 ORTHO05D004564 2.9e-16 91.7 113 47.8
RhsimUnG0236200 Rhododendron simsii HOM05D004041 ORTHO05D004564 1.9e-15 89.0 113 47.8
Cre09.g409200 Chlamydomonas reinhardtii HOM05D004041 ORTHO05D004564 2.1e-14 85.5 159 42.8
Manes.07G111004 Manihot esculenta HOM05D004041 ORTHO05D004564 6.0e-14 84.0 105 42.9
BolC3t18797H Brassica oleracea HOM05D004041 ORTHO05D004564 3.0e-13 81.6 112 48.2
Gorai.010G209900 Gossypium raimondii HOM05D004041 ORTHO05D004564 6.7e-13 80.5 99 48.5
Cfa024514 Carpinus fangiana HOM05D004041 ORTHO05D004564 1.1e-12 79.7 151 38.4
Zm00001eb204760 Zea mays HOM05D004041 ORTHO05D004564 1.5e-12 79.3 111 47.7
Zm00001eb357810 Zea mays HOM05D004041 ORTHO05D004564 9.6e-12 76.6 99 42.4
TPR.G10966 Trifolium pratense HOM05D004041 ORTHO05D004564 1.6e-11 75.9 57 73.7
Dinv19111 Davidia involucrata HOM05D004041 ORTHO05D004564 1.4e-10 72.8 63 60.3
Haze_21676 Corylus avellana HOM05D063909 ORTHO05D004564 1.2e-09 69.7 127 43.3
Gorai.010G211700 Gossypium raimondii HOM05D004041 ORTHO05D004564 1.2e-09 69.7 73 57.5
SGA_v2.0_scaffold7G03771 Striga asiatica HOM05D004041 ORTHO05D004564 4.5e-09 67.8 67 47.8
TPR.G14045 Trifolium pratense HOM05D004041 ORTHO05D004564 9.9e-09 66.6 53 56.6
BcaC01g02423 Brassica carinata HOM05D004041 ORTHO05D004564 3.8e-08 64.7 82 51.2


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