Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 3.4e-68 261.5 132 100.0
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 2.6e-60 235.3 132 88.6
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 6.0e-57 224.2 132 81.1
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 1.3e-56 223.0 132 80.3
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 2.4e-53 212.2 130 76.9
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.9e-51 205.3 132 75.8
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 8.4e-51 203.8 125 77.6
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 1.4e-50 203.0 133 75.9
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 3.2e-50 201.8 131 76.3
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 9.3e-50 200.3 133 73.7
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 2.1e-49 199.1 133 73.7
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 2.1e-49 199.1 125 76.0
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 2.1e-49 199.1 125 75.2
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 2.7e-49 198.7 133 73.7
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 4.6e-49 198.0 131 73.3
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.0e-48 196.8 132 74.2
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 1.0e-48 196.8 133 72.9
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.3e-48 196.4 125 74.4
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 1.8e-48 196.1 123 74.0
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 1.8e-48 196.1 125 75.2
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.8e-48 196.1 133 72.9
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.8e-48 196.1 133 72.2
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 3.9e-48 194.9 133 71.4
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 5.1e-48 194.5 131 72.5
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 6.7e-48 194.1 125 75.2
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 6.7e-48 194.1 125 72.0
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 1.1e-47 193.4 130 71.5
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 1.9e-47 192.6 126 73.0
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 3.3e-47 191.8 133 72.9
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 3.3e-47 191.8 132 68.9
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 3.3e-47 191.8 125 73.6
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 4.3e-47 191.4 125 73.6
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 4.3e-47 191.4 130 70.0
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 4.3e-47 191.4 125 73.6
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 5.6e-47 191.0 119 75.6
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 1.3e-46 189.9 123 71.5
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 2.1e-46 189.1 123 69.1
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 2.1e-46 189.1 125 72.0
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 3.7e-46 188.3 125 72.0
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 3.7e-46 188.3 131 72.5
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 3.7e-46 188.3 125 72.8
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 3.7e-46 188.3 124 71.8
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 4.8e-46 188.0 125 69.6
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 4.8e-46 188.0 123 70.7
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 4.8e-46 188.0 133 70.7
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 1.1e-45 186.8 125 70.4
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 1.1e-45 186.8 125 72.0
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.4e-45 186.4 125 72.0
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 1.4e-45 186.4 125 71.2
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 1.8e-45 186.0 125 69.6
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.8e-45 186.0 123 69.1
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 2.4e-45 185.7 124 71.8
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 5.3e-45 184.5 129 69.8
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 6.9e-45 184.1 123 73.2
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 6.9e-45 184.1 131 70.2
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 6.9e-45 184.1 131 67.9
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 9.0e-45 183.7 125 72.0
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 1.2e-44 183.3 125 69.6
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.5e-44 183.0 125 67.2
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.5e-44 183.0 125 71.2
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.0e-44 182.6 132 68.9
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 3.4e-44 181.8 123 69.1
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 4.5e-44 181.4 129 67.4
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 5.8e-44 181.0 133 67.7
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 5.8e-44 181.0 129 66.7
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 7.6e-44 180.6 127 66.1
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 1.0e-43 180.3 131 69.5
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 1.0e-43 180.3 125 72.0
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 1.3e-43 179.9 131 69.5
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.7e-43 179.5 125 69.6
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 1.7e-43 179.5 129 67.4
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 1.7e-43 179.5 123 69.9
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 2.2e-43 179.1 124 70.2
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 2.2e-43 179.1 124 71.0
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 3.8e-43 178.3 125 71.2
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 3.8e-43 178.3 125 68.8
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 4.9e-43 177.9 124 71.0
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 4.9e-43 177.9 124 69.4
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 4.9e-43 177.9 124 69.4
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 4.9e-43 177.9 124 69.4
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 4.9e-43 177.9 124 69.4
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 6.5e-43 177.6 124 69.4
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 6.5e-43 177.6 124 71.0
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 6.5e-43 177.6 131 67.2
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 6.5e-43 177.6 124 70.2
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.1e-42 176.8 124 69.4
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 1.4e-42 176.4 130 66.2
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.4e-42 176.4 125 65.6
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 1.4e-42 176.4 125 65.6
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 1.9e-42 176.0 124 68.5
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 3.2e-42 175.3 125 65.6
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 7.1e-42 174.1 125 67.2
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 9.3e-42 173.7 121 71.1
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 9.3e-42 173.7 125 64.8
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 1.2e-41 173.3 123 67.5
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 4.6e-41 171.4 133 66.2
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 4.6e-41 171.4 133 64.7
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.6e-41 171.4 125 64.0
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 4.6e-41 171.4 125 64.0
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 1.3e-40 169.9 133 65.4
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 1.3e-40 169.9 134 64.2
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.8e-40 169.5 134 62.7
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 3.0e-40 168.7 131 65.6
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 3.0e-40 168.7 137 62.8
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 3.0e-40 168.7 131 65.6
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 5.1e-40 167.9 150 56.0
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 1.1e-39 166.8 125 65.6
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 2.4e-37 159.1 125 63.2
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 5.3e-37 157.9 123 64.2
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 5.3e-37 157.9 125 62.4
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 1.0e-35 153.7 164 49.4
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 6.5e-35 151.0 131 58.0
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 3.2e-34 148.7 95 73.7
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 1.6e-33 146.4 103 68.9
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 5.7e-31 137.9 138 50.7
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 1.3e-30 136.7 131 58.0
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.1e-29 133.7 93 67.7
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 2.0e-28 129.4 137 47.4
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 3.4e-28 128.6 126 50.0
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.9e-27 125.6 126 49.2
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.8e-22 109.0 62 82.3
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.8e-22 109.0 62 82.3
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 8.2e-22 107.5 62 79.0
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 3.1e-21 105.5 62 79.0
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 5.9e-20 101.3 68 70.6
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.0e-19 100.5 62 74.2
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 1.1e-18 97.1 69 71.0
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 1.1e-18 97.1 118 39.0
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.4e-18 96.7 75 65.3
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.2e-17 93.6 75 64.0
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 2.1e-17 92.8 63 66.7
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 2.7e-17 92.4 64 70.3
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 3.6e-17 92.0 66 68.2
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 6.1e-17 91.3 71 62.0
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 5.2e-16 88.2 71 63.4
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.5e-15 86.7 63 63.5
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 3.3e-15 85.5 77 51.9
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 9.7e-15 84.0 72 54.2
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 3.1e-13 79.0 54 72.2
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 2.6e-12 75.9 69 52.2
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 3.5e-12 75.5 56 62.5
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 3.2e-10 68.9 116 31.0
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.2e-09 67.0 74 44.6
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 2.7e-09 65.9 69 46.4
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 4.7e-09 65.1 130 26.9
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 3.0e-08 62.4 56 53.6
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 3.3e-07 58.9 108 29.6


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