Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g029620 Amaranthus hybridus HOM05D004331 ORTHO05D004984 1.3e-123 446.4 226 100.0
AUR62030577 Chenopodium quinoa HOM05D004331 ORTHO05D004984 8.1e-86 320.9 232 73.3
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 1.9e-82 309.7 232 71.6
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 3.3e-79 298.9 227 70.5
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 2.6e-76 289.3 228 65.8
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 8.7e-56 221.1 228 55.3
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 3.7e-38 162.5 260 41.9
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 1.8e-37 160.2 232 45.7
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 1.8e-37 160.2 249 43.8
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 2.9e-35 152.9 232 47.0
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 2.5e-34 149.8 234 43.2
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 5.5e-34 148.7 239 42.7
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 7.2e-34 148.3 235 44.7
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 3.6e-33 146.0 235 44.3
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 4.7e-33 145.6 228 43.0
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 6.1e-33 145.2 233 42.5
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 1.0e-32 144.4 226 41.2
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 1.4e-32 144.1 226 41.2
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 6.7e-32 141.7 231 41.1
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 1.5e-31 140.6 232 42.2
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 2.0e-31 140.2 240 40.0
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 3.3e-31 139.4 111 64.9
MBI15_g10655_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 3.3e-31 139.4 291 36.8
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 4.4e-31 139.0 233 43.3
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 5.7e-31 138.7 133 57.1
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 7.4e-31 138.3 112 62.5
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 2.2e-30 136.7 226 42.5
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 2.8e-30 136.3 172 48.8
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 6.3e-30 135.2 113 61.1
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 8.2e-30 134.8 90 71.1
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 8.2e-30 134.8 113 64.6
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 1.1e-29 134.4 229 41.0
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 2.4e-29 133.3 176 46.0
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 2.4e-29 133.3 125 59.2
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 4.1e-29 132.5 112 63.4
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 4.1e-29 132.5 175 47.4
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 4.1e-29 132.5 232 41.4
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 4.1e-29 132.5 113 63.7
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 4.1e-29 132.5 114 59.6
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 4.1e-29 132.5 180 46.7
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 7.0e-29 131.7 113 58.4
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 7.0e-29 131.7 114 57.9
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 7.0e-29 131.7 141 52.5
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 7.0e-29 131.7 141 52.5
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 7.0e-29 131.7 141 52.5
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 7.0e-29 131.7 141 52.5
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 7.0e-29 131.7 111 63.1
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 9.1e-29 131.3 85 71.8
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 9.1e-29 131.3 180 48.3
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 9.1e-29 131.3 91 68.1
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.2e-28 131.0 90 70.0
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 1.2e-28 131.0 175 47.4
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 1.2e-28 131.0 246 40.2
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 1.6e-28 130.6 90 70.0
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.6e-28 130.6 237 39.7
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 1.6e-28 130.6 104 67.3
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 2.0e-28 130.2 90 67.8
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 2.0e-28 130.2 79 81.0
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 2.6e-28 129.8 90 67.8
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 3.5e-28 129.4 244 39.8
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 4.5e-28 129.0 93 71.0
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 5.9e-28 128.6 97 66.0
CiPaw.01G307900 Carya illinoinensis HOM05D004331 ORTHO05D004984 7.7e-28 128.3 171 49.7
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 7.7e-28 128.3 112 62.5
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 7.7e-28 128.3 94 63.8
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 1.3e-27 127.5 89 68.5
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 1.3e-27 127.5 105 60.0
Eucgr.G03162 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.7e-27 127.1 231 38.5
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.7e-27 127.1 144 50.0
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 1.7e-27 127.1 226 39.8
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 3.8e-27 125.9 99 61.6
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 3.8e-27 125.9 99 61.6
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 5.0e-27 125.6 129 51.9
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 5.0e-27 125.6 129 51.9
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 5.0e-27 125.6 98 62.2
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 5.0e-27 125.6 99 61.6
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 6.5e-27 125.2 97 67.0
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 6.5e-27 125.2 120 60.0
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 8.5e-27 124.8 219 39.3
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 8.5e-27 124.8 91 67.0
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 1.1e-26 124.4 106 61.3
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 1.1e-26 124.4 91 67.0
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 1.5e-26 124.0 90 66.7
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 1.9e-26 123.6 79 77.2
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 1.9e-26 123.6 225 39.6
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 3.2e-26 122.9 91 63.7
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 7.2e-26 121.7 90 65.6
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 7.2e-26 121.7 129 50.4
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 9.4e-26 121.3 100 62.0
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 2.1e-25 120.2 88 62.5
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 2.7e-25 119.8 113 54.0
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 4.7e-25 119.0 107 59.8
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 6.1e-25 118.6 107 55.1
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 6.1e-25 118.6 91 61.5
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 6.1e-25 118.6 103 57.3
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 8.0e-25 118.2 106 56.6
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.0e-24 117.9 84 69.0
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.0e-24 117.9 84 69.0
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 1.0e-24 117.9 233 38.2
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 1.4e-24 117.5 102 57.8
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 1.8e-24 117.1 75 73.3
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 2.3e-24 116.7 88 63.6
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 2.3e-24 116.7 83 68.7
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 4.0e-24 115.9 83 67.5
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 5.2e-24 115.5 96 61.5
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 6.7e-24 115.2 88 62.5
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 1.5e-23 114.0 134 47.8
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 1.5e-23 114.0 83 67.5
Zm00001eb123190 Zea mays HOM05D004331 ORTHO05D004984 1.5e-23 114.0 99 59.6
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 2.0e-23 113.6 134 48.5
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 3.3e-23 112.8 83 65.1
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 3.3e-23 112.8 85 62.4
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 3.3e-23 112.8 85 62.4
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 3.3e-23 112.8 85 62.4
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 7.5e-23 111.7 83 63.9
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 1.7e-22 110.5 65 78.5
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 1.7e-22 110.5 142 45.8
SHI31865 Sapria himalayana HOM05D004331 ORTHO05D004984 2.8e-22 109.8 108 50.0
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 3.1e-21 106.3 88 56.8
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 9.1e-21 104.8 81 65.4
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 2.0e-20 103.6 88 58.0
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 2.7e-20 103.2 111 51.4
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 7.7e-20 101.7 88 54.5
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 1.7e-19 100.5 65 66.2
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.5e-18 96.7 73 60.3
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.5e-18 96.7 73 60.3
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 4.2e-18 95.9 91 50.5
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 1.0e-16 91.3 64 62.5
C08p13890 Brassica napus HOM05D013285 ORTHO05D004984 1.4e-13 80.9 50 82.0
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 1.2e-12 77.8 43 86.0
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 3.7e-06 56.2 31 90.3


User provided reference genes

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