Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g028360 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.1e-99 364.4 181 100.0
Peaxi162Scf00049g00077 Petunia axillaris HOM05D000003 ORTHO05D000007 7.8e-23 111.3 131 38.9
PGSC0003DMG402017944 Solanum tuberosum HOM05D000003 ORTHO05D000007 7.8e-23 111.3 110 42.7
Peaxi162Scf00262g00132 Petunia axillaris HOM05D000003 ORTHO05D000007 9.5e-21 104.4 110 41.8
PGSC0003DMG400041473 Solanum tuberosum HOM05D000003 ORTHO05D000007 2.1e-20 103.2 96 47.9
Peaxi162Scf00537g00002 Petunia axillaris HOM05D000003 ORTHO05D000007 4.7e-20 102.1 111 37.8
Sopen00g004730 Solanum pennellii HOM05D000003 ORTHO05D000004 5.2e-19 98.6 149 32.2
Sopen00g008000 Solanum pennellii HOM05D000003 ORTHO05D000004 6.8e-19 98.2 160 32.5
Sopen00g009930 Solanum pennellii HOM05D000003 ORTHO05D000007 8.9e-19 97.8 129 33.3
Sopen00g009320 Solanum pennellii HOM05D000003 ORTHO05D000007 1.2e-18 97.4 145 30.3
Sopen00g013920 Solanum pennellii HOM05D000003 ORTHO05D000007 1.2e-18 97.4 129 33.3
CAN.G1128.13 Capsicum annuum HOM05D000003 ORTHO05D000007 1.5e-18 97.1 100 41.0
Sopen03g013400 Solanum pennellii HOM05D000003 ORTHO05D000004 2.0e-18 96.7 168 28.6
CAN.G279.7 Capsicum annuum HOM05D000003 ORTHO05D000006 2.6e-18 96.3 105 36.2
Sopen00g007950 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-18 95.9 151 28.5
Sopen00g010250 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-18 95.9 131 32.8
Sopen00g012660 Solanum pennellii HOM05D000003 ORTHO05D000007 5.8e-18 95.1 121 33.9
Sopen00g005320 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-17 94.0 156 32.1
Sopen05g024780 Solanum pennellii HOM05D000003 ORTHO05D000007 1.7e-17 93.6 141 31.2
Peaxi162Scf01533g00028 Petunia axillaris HOM05D000003 ORTHO05D000007 2.2e-17 93.2 111 37.8
Sopen00g008520 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-17 93.2 115 31.3
Peaxi162Scf00841g00041 Petunia axillaris HOM05D000003 ORTHO05D000007 4.9e-17 92.0 107 36.4
Sopen03g026770 Solanum pennellii HOM05D000003 ORTHO05D000007 4.9e-17 92.0 160 28.8
Sopen12g026800 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-17 92.0 141 31.2
Peaxi162Scf00704g00021 Petunia axillaris HOM05D000003 ORTHO05D000007 6.4e-17 91.7 94 41.5
Sopen00g003630 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-17 91.7 133 30.8
Sopen00g006450 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-17 91.7 112 34.8
Sopen04g011860 Solanum pennellii HOM05D000003 ORTHO05D000007 6.4e-17 91.7 119 32.8
Sopen04g018180 Solanum pennellii HOM05D000003 ORTHO05D000007 6.4e-17 91.7 155 29.7
Sopen05g020910 Solanum pennellii HOM05D000003 ORTHO05D000007 6.4e-17 91.7 160 30.0
Sopen10g008120 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-17 91.7 155 29.7
Sopen00g007130 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-17 91.3 155 29.7
Sopen00g008680 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-17 91.3 168 29.8
Sopen00g013150 Solanum pennellii HOM05D000003 ORTHO05D000007 8.3e-17 91.3 132 30.3
Sopen06g013930 Solanum pennellii HOM05D000003 ORTHO05D000007 8.3e-17 91.3 139 30.9
Sopen09g016100 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-17 91.3 110 34.5
Sopen03g011230 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-16 90.9 108 35.2
EL10Ac6g14095 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-16 90.5 130 34.6
Sopen00g010420 Solanum pennellii HOM05D000003 ORTHO05D000007 1.4e-16 90.5 131 31.3
Sopen00g011080 Solanum pennellii HOM05D000003 ORTHO05D000006 1.4e-16 90.5 109 33.9
Sopen12g013620 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-16 90.5 108 35.2
Sopen00g009650 Solanum pennellii HOM05D000003 ORTHO05D000004 1.9e-16 90.1 128 31.2
Sopen00g004290 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-16 89.7 119 31.1
Sopen00g008600 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-16 89.7 129 32.6
PGSC0003DMG400041031 Solanum tuberosum HOM05D000003 ORTHO05D000007 2.4e-16 89.7 106 36.8
Sopen00g010970 Solanum pennellii HOM05D000003 ORTHO05D000006 3.2e-16 89.4 133 32.3
PGSC0003DMG400020804 Solanum tuberosum HOM05D000003 ORTHO05D000007 3.2e-16 89.4 91 44.0
EL10As22g24223 Beta vulgaris HOM05D000003 ORTHO05D000007 5.4e-16 88.6 155 34.2
Sopen00g008780 Solanum pennellii HOM05D000003 ORTHO05D000004 9.2e-16 87.8 149 31.5
Sopen00g009000 Solanum pennellii HOM05D000003 ORTHO05D000004 9.2e-16 87.8 131 31.3
Sopen00g009290 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-15 87.4 146 30.1
Sopen09g011430 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-15 87.4 145 30.3
Ah.04g164610 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.6e-15 87.0 109 35.8
Ah.04g164680 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.6e-15 87.0 109 35.8
Sopen00g011710 Solanum pennellii HOM05D000003 ORTHO05D000007 1.6e-15 87.0 112 32.1
Sopen03g013440 Solanum pennellii HOM05D000003 ORTHO05D000007 1.6e-15 87.0 166 27.1
Peaxi162Scf00363g00042 Petunia axillaris HOM05D000003 ORTHO05D000007 2.1e-15 86.7 133 33.8
Sopen00g006710 Solanum pennellii HOM05D000003 ORTHO05D000004 2.7e-15 86.3 133 30.8
Peaxi162Scf00009g00121 Petunia axillaris HOM05D000003 ORTHO05D000007 3.5e-15 85.9 95 35.8
Peaxi162Scf00030g02723 Petunia axillaris HOM05D000003 ORTHO05D000006 4.6e-15 85.5 96 35.4
Peaxi162Scf00104g01625 Petunia axillaris HOM05D000003 ORTHO05D000007 4.6e-15 85.5 100 41.0
EL10Ac9g20695 Beta vulgaris HOM05D000003 ORTHO05D000007 7.8e-15 84.7 97 39.2
Sopen12g026830 Solanum pennellii HOM05D000003 ORTHO05D000007 7.8e-15 84.7 139 29.5
Nitab4.5_0000568g0050 Nicotiana tabacum HOM05D013827 ORTHO05D000007 1.0e-14 84.3 138 31.2
Nitab4.5_0003690g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.3e-14 84.0 107 30.8
Sopen05g017140 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-14 84.0 163 27.0
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-14 84.0 148 27.0
Sopen00g005800 Solanum pennellii HOM05D000003 ORTHO05D000007 1.7e-14 83.6 108 30.6
Sopen00g011480 Solanum pennellii HOM05D000003 ORTHO05D000007 2.3e-14 83.2 155 29.0
Sopen00g004700 Solanum pennellii HOM05D000003 ORTHO05D000004 5.1e-14 82.0 161 28.0
Ah.07g201910 Amaranthus hybridus HOM05D000003 ORTHO05D000007 6.6e-14 81.6 166 30.1
Nitab4.5_0000234g0170 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.1e-13 80.9 108 33.3
Peaxi162Scf00122g00098 Petunia axillaris HOM05D000003 ORTHO05D000007 1.5e-13 80.5 99 39.4
Peaxi162Scf00164g00114 Petunia axillaris HOM05D000003 ORTHO05D000007 1.5e-13 80.5 128 33.6
Psat3g081760 Pisum sativum HOM05D000003 ORTHO05D000007 1.5e-13 80.5 113 28.3
Sopen05g026260 Solanum pennellii HOM05D000003 ORTHO05D000007 1.9e-13 80.1 96 36.5
PGSC0003DMG400026698 Solanum tuberosum HOM05D000003 ORTHO05D000007 1.9e-13 80.1 94 34.0
Peaxi162Scf00106g02313 Petunia axillaris HOM05D000003 ORTHO05D009959 4.3e-13 79.0 109 34.9
Peaxi162Scf00543g00035 Petunia axillaris HOM05D000003 ORTHO05D000007 5.6e-13 78.6 98 32.7
CAN.G353.21 Capsicum annuum HOM05D008162 ORTHO05D009959 9.6e-13 77.8 106 35.8
Sopen08g018070 Solanum pennellii HOM05D000003 ORTHO05D000007 9.6e-13 77.8 109 31.2
Sopen00g008230 Solanum pennellii HOM05D000003 ORTHO05D000004 1.6e-12 77.0 95 33.7
Ah.07g200070 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.1e-12 76.6 97 34.0
Nitab4.5_0000021g0750 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.6e-12 75.9 161 29.2
Nitab4.5_0002636g0050 Nicotiana tabacum HOM05D008162 ORTHO05D009959 3.6e-12 75.9 124 29.0
Peaxi162Scf00231g00048 Petunia axillaris HOM05D000003 ORTHO05D000007 3.6e-12 75.9 134 29.1
Sopen00g007050 Solanum pennellii HOM05D000003 ORTHO05D000004 3.6e-12 75.9 87 33.3
PGSC0003DMG400032773 Solanum tuberosum HOM05D000003 ORTHO05D000007 3.6e-12 75.9 138 27.5
CAN.G1158.8 Capsicum annuum HOM05D011352 ORTHO05D009959 6.2e-12 75.1 83 36.1
Ah.13g067210 Amaranthus hybridus HOM05D000003 ORTHO05D000007 8.1e-12 74.7 151 29.1
Ah.10g025480 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.1e-11 74.3 101 33.7
Nitab4.5_0000012g0330 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.1e-11 74.3 88 38.6
Sopen00g004530 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-11 74.3 127 29.9
Ah.10g028410 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.4e-11 73.9 59 52.5
Peaxi162Scf00087g00091 Petunia axillaris HOM05D000003 ORTHO05D000007 1.4e-11 73.9 95 32.6
Ah.16g109420 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.4e-11 73.2 148 30.4
Nitab4.5_0002309g0100 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.4e-11 73.2 133 31.6
Nitab4.5_0003434g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.4e-11 73.2 124 29.8
Sopen00g006870 Solanum pennellii HOM05D000003 ORTHO05D000004 2.4e-11 73.2 97 29.9
Nitab4.5_0000017g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.1e-11 72.8 129 29.5
Peaxi162Scf00112g01218 Petunia axillaris HOM05D037098 ORTHO05D000007 3.1e-11 72.8 89 33.7
Nitab4.5_0002878g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000007 5.2e-11 72.0 123 33.3
Sopen01g029120 Solanum pennellii HOM05D000003 ORTHO05D000007 5.2e-11 72.0 94 35.1
Peaxi162Scf00850g00415 Petunia axillaris HOM05D000003 ORTHO05D009959 8.9e-11 71.2 155 26.5
Nitab4.5_0002309g0140 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.2e-10 70.9 91 37.4
Ah.07g197200 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.5e-10 70.5 100 35.0
Nitab4.5_0006483g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.5e-10 70.5 135 28.9
Sopen00g006340 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-10 70.5 141 29.8
Ah.06g186610 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.6e-10 69.7 83 36.1
Nitab4.5_0011157g0020 Nicotiana tabacum HOM05D000003 ORTHO05D009959 4.4e-10 68.9 104 31.7
Sopen00g005620 Solanum pennellii HOM05D000003 ORTHO05D000004 4.4e-10 68.9 82 29.3
Sopen05g020920 Solanum pennellii HOM05D000003 ORTHO05D000004 5.8e-10 68.6 80 35.0
TPR.G13276 Trifolium pratense HOM05D000003 ORTHO05D000004 7.6e-10 68.2 122 28.7
Nitab4.5_0000475g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.3e-09 67.4 115 32.2
Sopen12g018040 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-09 67.4 85 28.2
Ah.11g042370 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.9e-09 66.2 125 31.2
Peaxi162Scf00752g00017 Petunia axillaris HOM05D011352 ORTHO05D009959 2.9e-09 66.2 137 29.9
Ah.01g009010 Amaranthus hybridus HOM05D000003 ORTHO05D000007 8.4e-09 64.7 161 29.8
CAN.G584.47 Capsicum annuum HOM05D000040 ORTHO05D010138 8.4e-09 64.7 154 26.6
Dinv38718 Davidia involucrata HOM05D000003 ORTHO05D000007 8.4e-09 64.7 137 27.7
Nitab4.5_0004586g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.4e-09 64.7 89 32.6
Nitab4.5_0000928g0120 Nicotiana tabacum HOM05D008253 ORTHO05D000007 1.1e-08 64.3 105 28.6
TPR.G31613 Trifolium pratense HOM05D000003 ORTHO05D000007 1.4e-08 63.9 131 26.0
Peaxi162Scf00262g00120 Petunia axillaris HOM05D000003 ORTHO05D000007 2.4e-08 63.2 94 36.2
CAN.G1506.1 Capsicum annuum HOM05D000003 ORTHO05D000007 3.2e-08 62.8 81 30.9
Sopen12g013630 Solanum pennellii HOM05D000003 ORTHO05D000004 3.2e-08 62.8 137 25.5
Nitab4.5_0000829g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 4.2e-08 62.4 94 30.9
Peaxi162Scf00699g00065 Petunia axillaris HOM05D011352 ORTHO05D009959 4.2e-08 62.4 65 36.9
Nitab4.5_0001926g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000006 5.4e-08 62.0 81 33.3
Nitab4.5_0003308g0050 Nicotiana tabacum HOM05D008162 ORTHO05D009959 5.4e-08 62.0 115 29.6
Peaxi162Scf00063g00211 Petunia axillaris HOM05D000003 ORTHO05D000007 5.4e-08 62.0 84 29.8
Peaxi162Scf00477g00820 Petunia axillaris HOM05D000003 ORTHO05D000007 5.4e-08 62.0 90 31.1
AUR62042346 Chenopodium quinoa HOM05D000003 ORTHO05D000007 9.3e-08 61.2 73 34.2
Dinv11784 Davidia involucrata HOM05D000003 ORTHO05D000007 9.3e-08 61.2 137 24.8
Peaxi162Scf00924g00010 Petunia axillaris HOM05D008162 ORTHO05D000007 1.2e-07 60.8 67 35.8
TPR.G8630 Trifolium pratense HOM05D000003 ORTHO05D000004 1.2e-07 60.8 153 22.2
SHI13331 Sapria himalayana HOM05D000003 ORTHO05D000007 1.6e-07 60.5 138 31.2
TPR.G7851 Trifolium pratense HOM05D000003 ORTHO05D000007 2.1e-07 60.1 80 32.5
Dinv23885 Davidia involucrata HOM05D000003 ORTHO05D000007 2.7e-07 59.7 154 27.9
Nitab4.5_0005319g0040 Nicotiana tabacum HOM05D008162 ORTHO05D009959 2.7e-07 59.7 127 26.0
Ah.10g026680 Amaranthus hybridus HOM05D000003 ORTHO05D000004 3.5e-07 59.3 130 30.0
Nitab4.5_0000933g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.5e-07 59.3 80 33.8
Dinv22485 Davidia involucrata HOM05D000003 ORTHO05D000007 4.6e-07 58.9 203 23.6
Nitab4.5_0003250g0050 Nicotiana tabacum HOM05D008162 ORTHO05D009959 4.6e-07 58.9 126 28.6
Nitab4.5_0012390g0010 Nicotiana tabacum HOM05D011352 ORTHO05D009959 6.0e-07 58.5 57 42.1
CANSAT21G1545 Cannabis sativa HOM05D000003 ORTHO05D000007 7.8e-07 58.2 101 30.7
Dinv19394 Davidia involucrata HOM05D000243 ORTHO05D000007 7.8e-07 58.2 152 25.0
Peaxi162Scf01347g00139 Petunia axillaris HOM05D000003 ORTHO05D000007 7.8e-07 58.2 110 28.2
Peaxi162Scf00104g00129 Petunia axillaris HOM05D000003 ORTHO05D000007 1.0e-06 57.8 57 47.4
Peaxi162Scf00224g00101 Petunia axillaris HOM05D008162 ORTHO05D009959 1.3e-06 57.4 65 33.8
Dinv34972 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 57.0 108 25.9
Peaxi162Scf00699g00327 Petunia axillaris HOM05D000003 ORTHO05D000007 1.7e-06 57.0 89 29.2
Peaxi162Scf00085g01816 Petunia axillaris HOM05D000003 ORTHO05D000007 2.3e-06 56.6 91 35.2
SHI04298 Sapria himalayana HOM05D000003 ORTHO05D000007 2.3e-06 56.6 154 24.7
Solyc01g056950.1 Solanum lycopersicum HOM05D008162 ORTHO05D009959 2.3e-06 56.6 114 23.7
Nitab4.5_0000515g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.0e-06 56.2 104 26.0
Nitab4.5_0001874g0020 Nicotiana tabacum HOM05D027305 ORTHO05D009959 3.0e-06 56.2 73 35.6
Nitab4.5_0010967g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 3.0e-06 56.2 52 42.3
Peaxi162Scf00169g00172 Petunia axillaris HOM05D000003 ORTHO05D000006 3.9e-06 55.8 80 35.0
Peaxi162Scf01097g00411 Petunia axillaris HOM05D000003 ORTHO05D000006 3.9e-06 55.8 62 33.9
Peaxi162Scf00226g00084 Petunia axillaris HOM05D000003 ORTHO05D000007 5.1e-06 55.5 42 52.4
Peaxi162Scf01101g00041 Petunia axillaris HOM05D011352 ORTHO05D009959 5.1e-06 55.5 101 30.7
Nitab4.5_0002265g0240 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.6e-06 55.1 109 28.4
Dinv25289 Davidia involucrata HOM05D000003 ORTHO05D000007 8.7e-06 54.7 134 26.9
Dinv25290 Davidia involucrata HOM05D000003 ORTHO05D000007 8.7e-06 54.7 136 26.5
Peaxi162Scf00227g00113 Petunia axillaris HOM05D011352 ORTHO05D009959 8.7e-06 54.7 108 34.3
SHI28728 Sapria himalayana HOM05D000003 ORTHO05D000007 8.7e-06 54.7 108 27.8


User provided reference genes

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