Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g028020 Amaranthus hybridus HOM05D008537 ORTHO05D010652 4.9e-108 394.4 194 100.0
RcHm_v2.0_MTg0499151 Rosa chinensis HOM05D008537 ORTHO05D010652 1.7e-63 246.5 123 96.7
Solyc00g500112.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 1.6e-61 240.0 122 95.1
arahy.Tifrunner.gnm1.ann1.DJ3Y2L Arachis hypogaea HOM05D008537 ORTHO05D010652 9.4e-59 230.7 113 98.2
arahy.Tifrunner.gnm1.ann1.PZS5LY Arachis hypogaea HOM05D008537 ORTHO05D010652 9.4e-59 230.7 113 98.2
SabraMtG0006100 Salix brachista HOM05D008537 ORTHO05D010652 3.6e-58 228.8 116 94.0
CsaV3_UNG209980 Cucumis sativus L. HOM05D008537 ORTHO05D010652 8.0e-58 227.6 114 95.6
Solyc00g500256.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 2.0e-56 223.0 114 94.7
TPR.G35334 Trifolium pratense HOM05D008537 ORTHO05D010652 3.4e-56 222.2 114 94.7
arahy.Tifrunner.gnm1.ann1.75TDV4 Arachis hypogaea HOM05D008537 ORTHO05D010652 7.5e-56 221.1 113 92.9
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 2.4e-54 216.1 108 96.3
Gorai.001G167800 Gossypium raimondii HOM05D008537 ORTHO05D010652 5.4e-54 214.9 108 97.2
Ca_27707_v3 Cicer arietinum L. HOM05D008537 ORTHO05D010652 1.6e-53 213.4 114 91.2
Actinidia34884 Actinidia chinensis HOM05D008537 ORTHO05D010652 3.5e-53 212.2 106 96.2
CDE02G3137 Ceratophyllum demersum HOM05D008537 ORTHO05D010652 3.3e-51 205.7 112 91.1
Aa31csc464G100 Aethionema arabicum HOM05D008537 ORTHO05D010652 6.8e-49 198.0 106 90.6
CARHR287170 Cardamine hirsuta HOM05D008537 ORTHO05D010652 1.7e-44 183.3 93 96.8
Lalb_Chr00c51g0413211 Lupinus albus HOM05D008537 ORTHO05D010652 2.3e-41 172.9 89 95.5
SEGI_04170 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 3.1e-41 172.6 105 81.0
SEGI_18574 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 3.1e-41 172.6 105 81.0
SEGI_08781 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.5e-40 170.2 105 80.0
BolSC28t60361H Brassica oleracea HOM05D008537 ORTHO05D010652 3.3e-35 152.5 98 81.6
BraSC177t45759Z Brassica rapa HOM05D008537 ORTHO05D010652 3.3e-35 152.5 98 81.6
BraSC48t46348Z Brassica rapa HOM05D008537 ORTHO05D010652 3.3e-35 152.5 98 81.6
LjContig00439g0010598 Lotus japonicus HOM05D008537 ORTHO05D010652 4.7e-34 148.7 101 78.2
LjContig00446g0012519 Lotus japonicus HOM05D008537 ORTHO05D010652 4.7e-34 148.7 101 78.2
Solyc11g030915.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 6.2e-34 148.3 94 78.7
EL10Ac5g12180 Beta vulgaris HOM05D008537 ORTHO05D010652 4.4e-32 142.1 122 61.5
Glyma.17G185800 Glycine max HOM05D008537 ORTHO05D010652 6.4e-31 138.3 134 60.4
C01p34740 Brassica napus HOM05D008537 ORTHO05D010652 6.0e-29 131.7 98 71.4
Mapoly3683s0001 Marchantia polymorpha HOM05D008537 ORTHO05D010652 1.0e-20 104.4 73 69.9
ATR1126G003 Amborella trichopoda HOM05D008537 ORTHO05D010652 1.7e-15 87.0 47 91.5
SHI26665 Sapria himalayana HOM05D008537 ORTHO05D010652 1.5e-08 63.9 35 82.9
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 5.8e-08 62.0 91 35.2
Solyc10g045727.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 7.6e-08 61.6 80 48.8
Nitab4.5_0003632g0010 Nicotiana tabacum HOM05D008537 ORTHO05D010652 7.1e-06 55.1 26 96.2
Peaxi162Scf00622g00018 Petunia axillaris HOM05D008537 ORTHO05D010652 7.1e-06 55.1 34 82.4


User provided reference genes

Program Settings