Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 4.9e-188 661.0 336 100.0
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 4.7e-90 335.5 359 54.6
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 2.0e-88 330.1 359 54.0
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 5.6e-83 312.0 358 52.2
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 3.7e-42 176.4 395 35.7
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 2.6e-40 170.2 399 36.3
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 3.4e-40 169.9 311 38.6
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 3.5e-37 159.8 329 36.8
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 1.8e-36 157.5 396 32.8
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 1.1e-35 154.8 387 32.6
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.1e-35 154.8 329 36.2
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 5.7e-35 152.5 365 36.4
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 7.4e-35 152.1 331 34.1
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 9.7e-35 151.8 316 36.4
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 2.2e-34 150.6 312 35.3
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 2.2e-34 150.6 313 36.1
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 2.4e-33 147.1 311 35.7
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 4.1e-33 146.4 365 29.6
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 9.0e-33 145.2 310 36.1
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 1.5e-32 144.4 402 32.3
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 4.5e-32 142.9 312 34.0
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 4.5e-32 142.9 312 34.0
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 1.0e-31 141.7 333 34.5
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 1.3e-31 141.4 333 34.5
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 1.7e-31 141.0 349 33.5
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 2.2e-31 140.6 402 31.6
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 2.9e-31 140.2 379 31.1
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 8.5e-31 138.7 397 33.8
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 8.5e-31 138.7 381 33.6
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 1.9e-30 137.5 350 34.9
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 1.9e-30 137.5 194 44.3
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 3.2e-30 136.7 361 33.8
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 5.5e-30 136.0 371 30.2
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 5.5e-30 136.0 356 33.7
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 7.2e-30 135.6 349 32.7
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 9.4e-30 135.2 368 30.2
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 9.4e-30 135.2 328 34.5
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 2.7e-29 133.7 381 30.4
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 4.6e-29 132.9 350 32.6
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 4.6e-29 132.9 348 34.2
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 6.1e-29 132.5 361 32.4
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 1.0e-28 131.7 375 32.0
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 1.4e-28 131.3 341 30.8
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.4e-28 131.3 380 29.2
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 1.8e-28 131.0 399 31.1
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 2.3e-28 130.6 377 30.2
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 1.1e-27 128.3 318 32.7
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 1.5e-27 127.9 359 31.5
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 2.0e-27 127.5 348 29.3
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 2.0e-27 127.5 376 33.0
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 2.5e-27 127.1 340 30.9
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 3.3e-27 126.7 371 28.6
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 4.3e-27 126.3 366 29.8
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 7.4e-27 125.6 402 28.9
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 3.7e-26 123.2 373 30.3
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 4.8e-26 122.9 349 30.7
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 6.3e-26 122.5 386 30.3
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 8.2e-26 122.1 350 32.0
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 1.4e-25 121.3 362 29.0
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 4.1e-25 119.8 358 30.2
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 4.1e-25 119.8 391 30.9
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 5.3e-25 119.4 361 29.4
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 5.3e-25 119.4 361 29.4
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 5.3e-25 119.4 338 29.3
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 1.2e-24 118.2 345 29.9
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 1.2e-24 118.2 349 31.5
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 2.0e-24 117.5 348 30.5
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 2.6e-24 117.1 371 30.2
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 3.4e-24 116.7 334 31.7
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 3.4e-24 116.7 350 31.7
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 5.9e-24 115.9 217 41.5
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 2.9e-23 113.6 379 28.5
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 1.1e-22 111.7 353 29.7
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 5.5e-22 109.4 312 31.1
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 1.2e-21 108.2 353 29.7
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 1.6e-21 107.8 359 30.6
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 4.7e-21 106.3 403 27.5
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 6.1e-21 105.9 339 29.2
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 1.4e-20 104.8 310 29.7
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 2.3e-20 104.0 322 28.3
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 1.1e-19 101.7 373 28.2
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 1.5e-19 101.3 339 28.9
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 5.7e-19 99.4 373 27.6
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 9.7e-19 98.6 368 28.5
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 9.7e-19 98.6 387 27.9
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 1.3e-18 98.2 387 27.9
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 1.3e-18 98.2 321 29.9
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 1.7e-18 97.8 368 28.5
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.2e-18 97.4 381 27.3
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 2.8e-18 97.1 388 29.4
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 8.2e-18 95.5 318 29.6
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.4e-17 94.0 272 30.9
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 3.5e-16 90.1 327 28.4
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 2.2e-15 87.4 353 26.6
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 2.2e-15 87.4 353 26.6
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 1.5e-14 84.7 149 38.9
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 7.2e-14 82.4 309 25.9
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 7.2e-14 82.4 347 25.6
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 9.4e-14 82.0 149 37.6
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 2.1e-13 80.9 124 41.9
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 1.7e-10 71.2 106 43.4
HanXRQChr12g0385981 Helianthus annuus HOM05D006730 ORTHO05D008189 2.8e-10 70.5 99 44.4
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 2.2e-07 60.8 258 26.4
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 2.2e-07 60.8 312 27.6
Actinidia26680 Actinidia chinensis HOM05D006730 ORTHO05D008189 7.2e-06 55.8 49 51.0


User provided reference genes

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