Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g026880 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.2e-80 301.2 143 100.0
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.6e-31 139.8 135 52.6
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.5e-24 114.0 129 47.3
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.2e-20 102.8 140 43.6
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.1e-19 100.5 144 41.0
Ah.06g186480 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.4e-19 98.2 97 52.6
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 9.2e-19 97.4 105 46.7
Ah.05g174560 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.5e-18 95.5 136 40.4
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.3e-17 92.8 114 46.5
Ah.12g060360 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.0e-17 91.7 94 47.9
Ah.07g201540 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.7e-15 85.1 142 34.5
Ah.13g066110 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.3e-14 82.8 107 42.1
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.4e-13 79.0 159 32.7
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.5e-13 77.8 96 40.6
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.2e-12 76.3 97 40.2
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.1e-11 73.9 113 38.1
Ah.05g173090 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.4e-11 71.6 101 39.6
Ah.07g198450 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.4e-11 71.6 123 36.6
Ah.10g037270 Amaranthus hybridus HOM05D005124 ORTHO05D005914 1.2e-10 70.5 149 36.2
Ah.14g081710 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.5e-08 63.5 108 38.0
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 4.3e-08 62.0 69 36.2
Lj6g0001371 Lotus japonicus HOM05D008220 ORTHO05D010358 4.3e-08 62.0 69 36.2
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.3e-08 61.2 110 35.5
Ah.06g183510 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.6e-07 58.9 107 38.3
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 8.1e-07 57.8 70 35.7
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.1e-06 57.4 70 40.0
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.8e-06 56.6 70 40.0
Ah.11g045590 Amaranthus hybridus HOM05D000851 ORTHO05D003960 2.4e-06 56.2 101 38.6
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.0e-06 55.5 129 34.1
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.0e-06 55.5 68 44.1
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 5.2e-06 55.1 69 39.1
Lsat_1_v5_gn_3_72241 Lactuca sativa HOM05D003915 ORTHO05D005386 6.8e-06 54.7 71 42.3
Nitab4.5_0000121g0010 Nicotiana tabacum HOM05D001543 ORTHO05D001722 6.8e-06 54.7 71 31.0
Nitab4.5_0007883g0010 Nicotiana tabacum HOM05D001543 ORTHO05D001722 6.8e-06 54.7 71 31.0
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.8e-06 54.7 70 37.1
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 6.8e-06 54.7 89 36.0
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.9e-06 54.3 69 40.6


User provided reference genes

Program Settings