Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g026840 Amaranthus hybridus HOM05D005126 ORTHO05D006169 2.0e-32 141.7 66 100.0
AUR62000477 Chenopodium quinoa HOM05D005126 ORTHO05D006169 3.7e-15 84.3 54 70.4
AUR62006818 Chenopodium quinoa HOM05D005126 ORTHO05D006169 1.1e-14 82.8 38 92.1
Glyma.07G187500 Glycine max HOM05D005126 ORTHO05D006169 4.1e-14 80.9 38 89.5
MD05G1335200 Malus domestica HOM05D005126 ORTHO05D006169 4.1e-14 80.9 38 89.5
SalBow4G2671 Salvia bowleyana HOM05D005126 ORTHO05D006169 4.1e-14 80.9 38 89.5
MSTRG.4220 Avicennia marina HOM05D005126 ORTHO05D006169 5.4e-14 80.5 38 89.5
Carub.0002s0337 Capsella rubella HOM05D005126 ORTHO05D006169 5.4e-14 80.5 38 89.5
arahy.Tifrunner.gnm1.ann1.7M140W Arachis hypogaea HOM05D005126 ORTHO05D006169 9.2e-14 79.7 38 86.8
arahy.Tifrunner.gnm1.ann1.JX13SW Arachis hypogaea HOM05D005126 ORTHO05D006169 9.2e-14 79.7 38 86.8
AT1G61690 Arabidopsis thaliana HOM05D005126 ORTHO05D006169 1.2e-13 79.3 38 86.8
FvH4_3g03041 Fragaria vesca HOM05D005126 ORTHO05D006169 1.2e-13 79.3 39 84.6
HanXRQChr05g0130831 Helianthus annuus HOM05D005126 ORTHO05D006169 1.2e-13 79.3 38 86.8
PSO832G1831 Papaver somniferum HOM05D005126 ORTHO05D006169 1.2e-13 79.3 38 86.8
FAN21G2838 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.6e-13 79.0 38 86.8
FAN25G1045 Fragaria x ananassa HOM05D005126 ORTHO05D006169 1.6e-13 79.0 38 86.8
Phvul.002G219000 Phaseolus vulgaris HOM05D005126 ORTHO05D006169 1.6e-13 79.0 38 86.8
VMungo0251G0970 Vigna mungo HOM05D005126 ORTHO05D006169 1.6e-13 79.0 38 86.8
EL10Ac4g09560 Beta vulgaris HOM05D005126 ORTHO05D006169 2.0e-13 78.6 38 86.8
Hma1.2p1_0809F.1_g221780 Hydrangea macrophylla HOM05D005126 ORTHO05D006169 3.5e-13 77.8 38 84.2
THA.LOC104809525 Tarenaya hassleriana HOM05D005126 ORTHO05D006169 3.5e-13 77.8 38 86.8
unitig_736.g22481 Utricularia gibba HOM05D005126 ORTHO05D006169 3.5e-13 77.8 38 84.2
Cc02_g11860 Coffea canephora HOM05D005126 ORTHO05D006169 4.5e-13 77.4 38 84.2
Prupe.4G030200 Prunus persica HOM05D005126 ORTHO05D006169 4.5e-13 77.4 38 86.8
CSS0033857 Camellia sinensis var. sinensis HOM05D005126 ORTHO05D006169 5.9e-13 77.0 38 84.2
Lj2C276T6 Lonicera japonica HOM05D005126 ORTHO05D006169 5.9e-13 77.0 38 84.2
Oeu045309.1 Olea europaea HOM05D005126 ORTHO05D006169 5.9e-13 77.0 38 84.2
DCAR_004173 Daucus carota HOM05D005126 ORTHO05D006169 7.8e-13 76.6 38 84.2
Lsat_1_v5_gn_7_18540 Lactuca sativa HOM05D005126 ORTHO05D006169 7.8e-13 76.6 38 81.6
QL05p077365 Quercus lobata HOM05D005126 ORTHO05D006169 7.8e-13 76.6 38 86.8
AL2G14430 Arabidopsis lyrata HOM05D005126 ORTHO05D006169 1.0e-12 76.3 38 84.2
BcaB04g20363 Brassica carinata HOM05D005126 ORTHO05D006169 1.0e-12 76.3 38 84.2
A01p30560 Brassica napus HOM05D005126 ORTHO05D006169 1.0e-12 76.3 38 84.2
BraA01t03188Z Brassica rapa HOM05D005126 ORTHO05D006169 1.0e-12 76.3 38 84.2
Thhalv10023224m.g Eutrema salsugineum HOM05D005126 ORTHO05D006169 1.0e-12 76.3 38 84.2
MD10G1310700 Malus domestica HOM05D005126 ORTHO05D006169 1.0e-12 76.3 38 84.2
PSO210G4646 Papaver somniferum HOM05D005126 ORTHO05D006169 1.0e-12 76.3 38 84.2
SGA_v2.0_scaffold216G42402 Striga asiatica HOM05D005126 ORTHO05D006169 1.0e-12 76.3 38 84.2
CAN.G424.91 Capsicum annuum HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
COL.COLO4_33008 Corchorus olitorius HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
Glyma.08G061700 Glycine max HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
Gohir.A06G208600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
Gohir.D06G212500 Gossypium hirsutum HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
Gorai.010G253600 Gossypium raimondii HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
Nn1g03751 Nelumbo nucifera HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
RcHm_v2.0_Chr5g0004701 Rosa chinensis HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
Sopen02g024620 Solanum pennellii HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
PGSC0003DMG400021720 Solanum tuberosum HOM05D005126 ORTHO05D006169 1.3e-12 75.9 38 84.2
ECA236G2220 Erigeron canadensis HOM05D005126 ORTHO05D006169 1.7e-12 75.5 38 84.2
Aqoxy4G01910 Aquilegia oxysepala HOM05D005126 ORTHO05D006169 2.3e-12 75.1 38 81.6
Migut.N00381 Erythranthe guttata HOM05D005126 ORTHO05D006169 2.3e-12 75.1 38 81.6
Psat7g105840 Pisum sativum HOM05D005126 ORTHO05D006169 2.3e-12 75.1 38 81.6
Potri.011G032200 Populus trichocarpa HOM05D005126 ORTHO05D006169 2.3e-12 75.1 38 81.6
Rhsim13G0163000 Rhododendron simsii HOM05D005126 ORTHO05D006169 2.3e-12 75.1 38 78.9
vmacro03741 Vaccinium macrocarpon HOM05D005126 ORTHO05D006169 2.3e-12 75.1 38 78.9
Actinidia05547 Actinidia chinensis HOM05D005126 ORTHO05D006169 2.9e-12 74.7 38 81.6
CARHR050640 Cardamine hirsuta HOM05D005126 ORTHO05D006169 2.9e-12 74.7 38 81.6
ClCG01G022310 Citrullus lanatus HOM05D005126 ORTHO05D006169 2.9e-12 74.7 38 81.6
MELO3C007347.2 Cucumis melo HOM05D005126 ORTHO05D006169 2.9e-12 74.7 38 81.6
CsaV3_6G049470 Cucumis sativus L. HOM05D005126 ORTHO05D006169 2.9e-12 74.7 38 81.6
Dinv17855 Davidia involucrata HOM05D005126 ORTHO05D006169 2.9e-12 74.7 38 81.6
Lj4g0001880 Lotus japonicus HOM05D005126 ORTHO05D006169 2.9e-12 74.7 38 81.6
Lalb_Chr09g0327171 Lupinus albus HOM05D005126 ORTHO05D006169 2.9e-12 74.7 38 78.9
C01p38950 Brassica napus HOM05D005126 ORTHO05D006169 3.9e-12 74.3 38 81.6
BolC1t03845H Brassica oleracea HOM05D005126 ORTHO05D006169 3.9e-12 74.3 38 81.6
SEGI_24274 Sequoiadendron giganteum HOM05D005126 ORTHO05D006169 3.9e-12 74.3 38 81.6
Ciclev10007263m.g Citrus clementina HOM05D005126 ORTHO05D006169 5.0e-12 73.9 38 81.6
Eucgr.H00119 Eucalyptus grandis HOM05D005126 ORTHO05D006169 5.0e-12 73.9 38 81.6
Thecc.06G207200 Theobroma cacao HOM05D005126 ORTHO05D006169 5.0e-12 73.9 38 84.2
CANSAT35G0768 Cannabis sativa HOM05D005126 ORTHO05D006169 6.6e-12 73.6 38 78.9
Prupe.4G012200 Prunus persica HOM05D005126 ORTHO05D006169 6.6e-12 73.6 38 84.2
Sp2g02860 Schrenkiella parvula HOM05D005126 ORTHO05D006169 6.6e-12 73.6 38 81.6
Hund23540 Selenicereus undatus HOM05D005126 ORTHO05D006169 6.6e-12 73.6 38 78.9
Cfa000280 Carpinus fangiana HOM05D005126 ORTHO05D006169 8.6e-12 73.2 38 78.9
CDE01G0539 Ceratophyllum demersum HOM05D005126 ORTHO05D006169 8.6e-12 73.2 38 81.6
Ca_18455_v3 Cicer arietinum L. HOM05D005126 ORTHO05D006169 8.6e-12 73.2 38 78.9
Nitab4.5_0000503g0120 Nicotiana tabacum HOM05D005126 ORTHO05D006169 8.6e-12 73.2 38 78.9
Nitab4.5_0006456g0050 Nicotiana tabacum HOM05D005126 ORTHO05D006169 8.6e-12 73.2 38 78.9
PGR031G2928 Punica granatum HOM05D005126 ORTHO05D006169 8.6e-12 73.2 38 78.9
TWI63G0986 Tripterygium wilfordii HOM05D005126 ORTHO05D006169 8.6e-12 73.2 38 78.9
ATR0804G089 Amborella trichopoda HOM05D005126 ORTHO05D006169 1.1e-11 72.8 38 78.9
Haze_06662 Corylus avellana HOM05D005126 ORTHO05D006169 1.1e-11 72.8 38 78.9
Medtr4g092040 Medicago truncatula HOM05D005126 ORTHO05D006169 1.1e-11 72.8 38 78.9
Sed0023382 Sechium edule HOM05D005126 ORTHO05D006169 1.1e-11 72.8 38 78.9
CiPaw.09G152800 Carya illinoinensis HOM05D005126 ORTHO05D006169 1.5e-11 72.4 38 78.9
MBI07_g11719_MAGBIO Magnolia biondii HOM05D005126 ORTHO05D006169 1.5e-11 72.4 38 76.3
Sc05g0008390 Simmondsia chinensis HOM05D005126 ORTHO05D006169 1.5e-11 72.4 38 78.9
TAR624G1039 Trochodendron aralioides HOM05D005126 ORTHO05D006169 1.9e-11 72.0 38 76.3
Sabra11G0025300 Salix brachista HOM05D005126 ORTHO05D006169 3.3e-11 71.2 38 78.9
Potri.004G030500 Populus trichocarpa HOM05D005126 ORTHO05D006169 5.6e-11 70.5 38 78.9
Manes.15G164500 Manihot esculenta HOM05D005126 ORTHO05D006169 7.3e-11 70.1 38 76.3
Ah.06g190720 Amaranthus hybridus HOM05D005126 ORTHO05D006169 9.5e-11 69.7 38 78.9
SMO141G0003 Selaginella moellendorffii HOM05D005126 ORTHO05D006169 1.2e-10 69.3 38 73.7
Aa31LG2G9130 Aethionema arabicum HOM05D005126 ORTHO05D006169 3.6e-10 67.8 38 68.4
AagrBONN_evm.TU.Sc2ySwM_368.2701 Anthoceros agrestis HOM05D005126 ORTHO05D006169 3.1e-09 64.7 38 68.4
Os03g0669800 Oryza sativa ssp. japonica HOM05D005126 ORTHO05D006169 4.0e-09 64.3 38 65.8
Mapoly0032s0118 Marchantia polymorpha HOM05D005126 ORTHO05D006169 3.4e-08 61.2 38 65.8
Gohir.D10G017600 Gossypium hirsutum HOM05D005126 ORTHO05D006169 8.3e-07 56.6 38 68.4
Gorai.011G019500 Gossypium raimondii HOM05D005126 ORTHO05D006169 8.3e-07 56.6 38 68.4
Gohir.A10G017400 Gossypium hirsutum HOM05D005126 ORTHO05D006169 1.4e-06 55.8 38 68.4
Pp3c16_8350 Physcomitrium patens HOM05D005126 ORTHO05D006169 5.4e-06 53.9 37 56.8


User provided reference genes

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