Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g026790 Amaranthus hybridus HOM05D002165 ORTHO05D001531 4.4e-36 154.1 76 100.0
Ah.06g190740 Amaranthus hybridus HOM05D002165 ORTHO05D001531 3.5e-25 117.9 73 83.6
EL10Ac4g09564 Beta vulgaris HOM05D002165 ORTHO05D001531 1.1e-21 106.3 70 81.4
AUR62000479 Chenopodium quinoa HOM05D002165 ORTHO05D001531 7.5e-20 100.1 73 68.5
AUR62006822 Chenopodium quinoa HOM05D002165 ORTHO05D001531 2.2e-19 98.6 73 67.1
Ah.10g026800 Amaranthus hybridus HOM05D002165 ORTHO05D001531 5.8e-12 73.9 79 55.7
Sc16g0009410 Simmondsia chinensis HOM05D002165 ORTHO05D001531 2.2e-11 72.0 71 59.2
AUR62023661 Chenopodium quinoa HOM05D002165 ORTHO05D001531 4.6e-09 64.3 50 60.0
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.8e-09 63.5 51 52.9
AUR62002532 Chenopodium quinoa HOM05D002165 ORTHO05D001531 1.0e-08 63.2 55 54.5
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.7e-08 62.4 64 50.0
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.7e-08 62.4 64 50.0
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.0e-08 61.6 66 47.0
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.0e-08 61.6 66 47.0
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.7e-08 60.1 46 54.3
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 1.1e-07 59.7 46 63.0
EL10Ac3g06229 Beta vulgaris HOM05D002165 ORTHO05D001531 1.1e-07 59.7 50 54.0
BcaC04g23632 Brassica carinata HOM05D002165 ORTHO05D001531 1.1e-07 59.7 82 47.6
A09p05720 Brassica napus HOM05D002165 ORTHO05D001531 1.1e-07 59.7 82 47.6
C09p06310 Brassica napus HOM05D002165 ORTHO05D001531 1.1e-07 59.7 82 47.6
BolC9t53551H Brassica oleracea HOM05D002165 ORTHO05D001531 1.1e-07 59.7 82 47.6
BraA09t36213Z Brassica rapa HOM05D002165 ORTHO05D001531 1.1e-07 59.7 82 47.6
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 1.1e-07 59.7 46 63.0
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 1.1e-07 59.7 48 56.2
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.5e-07 59.3 60 51.7
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.5e-07 59.3 60 51.7
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 1.5e-07 59.3 67 50.7
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 1.5e-07 59.3 67 50.7
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 1.5e-07 59.3 67 50.7
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 1.9e-07 58.9 82 47.6
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 1.9e-07 58.9 82 47.6
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 1.9e-07 58.9 82 47.6
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.9e-07 58.9 39 69.2
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 1.9e-07 58.9 49 51.0
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 2.5e-07 58.5 64 46.9
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.5e-07 58.5 39 69.2
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.5e-07 58.5 39 66.7
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.5e-07 58.5 50 48.0
Ca_21362_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 3.3e-07 58.2 46 54.3
MELO3C006762.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.3e-07 58.2 56 53.6
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.3e-07 58.2 59 49.2
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 3.3e-07 58.2 83 45.8
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 4.3e-07 57.8 66 48.5
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 4.3e-07 57.8 66 48.5
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 4.3e-07 57.8 66 48.5
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 4.3e-07 57.8 66 48.5
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 4.3e-07 57.8 66 48.5
CsaV3_3G015630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 4.3e-07 57.8 57 52.6
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.3e-07 57.8 44 54.5
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 5.6e-07 57.4 69 47.8
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.6e-07 57.4 62 48.4
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 9.6e-07 56.6 82 46.3
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 9.6e-07 56.6 39 66.7
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 9.6e-07 56.6 64 43.8
Thhalv10021847m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 9.6e-07 56.6 75 41.3
AT3G05858 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 1.2e-06 56.2 62 45.2
BcaC01g04301 Brassica carinata HOM05D002165 ORTHO05D001531 1.2e-06 56.2 81 42.0
C03p41790 Brassica napus HOM05D002165 ORTHO05D001531 1.2e-06 56.2 81 42.0
BolC3t16462H Brassica oleracea HOM05D002165 ORTHO05D001531 1.2e-06 56.2 81 42.0
ClCG08G002340 Citrullus lanatus HOM05D002165 ORTHO05D001531 1.2e-06 56.2 54 51.9
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.2e-06 56.2 60 43.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-06 56.2 46 54.3
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-06 56.2 46 54.3
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.2e-06 56.2 46 54.3
AT5G26620 Arabidopsis thaliana HOM05D002165 ORTHO05D001531 1.6e-06 55.8 71 47.9
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.6e-06 55.8 62 51.6
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.6e-06 55.8 71 43.7
Lalb_Chr12g0200511 Lupinus albus HOM05D002165 ORTHO05D001531 1.6e-06 55.8 42 64.3
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 2.1e-06 55.5 62 45.2
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 2.1e-06 55.5 87 41.4
Carub.0003s0521 Capsella rubella HOM05D002165 ORTHO05D001531 2.8e-06 55.1 61 47.5
ClCG03G017890 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.8e-06 55.1 47 55.3
ClCG08G002300 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.8e-06 55.1 54 50.0
ClCG08G002330 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.8e-06 55.1 54 50.0
ClCG08G002370 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.8e-06 55.1 54 50.0
MELO3C025018.2 Cucumis melo HOM05D002165 ORTHO05D001531 2.8e-06 55.1 54 50.0
CsaV3_6G002620 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.8e-06 55.1 54 50.0
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.8e-06 55.1 71 43.7
Sed0027158 Sechium edule HOM05D002165 ORTHO05D001531 2.8e-06 55.1 48 54.2
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 3.6e-06 54.7 42 59.5
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 3.6e-06 54.7 62 46.8
BcaB04g19240 Brassica carinata HOM05D002165 ORTHO05D001531 3.6e-06 54.7 81 40.7
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 3.6e-06 54.7 61 44.3
A03p34320 Brassica napus HOM05D002165 ORTHO05D001531 3.6e-06 54.7 81 40.7
BraA03t12608Z Brassica rapa HOM05D002165 ORTHO05D001531 3.6e-06 54.7 81 40.7
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 3.6e-06 54.7 49 53.1
CsaV3_6G002650 Cucumis sativus L. HOM05D002165 ORTHO05D001531 3.6e-06 54.7 54 48.1
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 3.6e-06 54.7 49 51.0
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 3.6e-06 54.7 60 48.3
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 3.6e-06 54.7 68 44.1
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 3.6e-06 54.7 44 56.8
Aa31LG11G9930 Aethionema arabicum HOM05D002165 ORTHO05D001531 4.7e-06 54.3 66 47.0
MD16G1133300 Malus domestica HOM05D002165 ORTHO05D001531 4.7e-06 54.3 53 47.2
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 4.7e-06 54.3 49 51.0
Psat4g020920 Pisum sativum HOM05D002165 ORTHO05D001531 4.7e-06 54.3 59 47.5
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 4.7e-06 54.3 49 49.0
BcaC05g29776 Brassica carinata HOM05D002165 ORTHO05D001531 8.1e-06 53.5 62 43.5
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 8.1e-06 53.5 53 49.1
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 8.1e-06 53.5 46 52.2
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 8.1e-06 53.5 46 52.2
Lj6g0008561 Lotus japonicus HOM05D002165 ORTHO05D001531 8.1e-06 53.5 50 48.0
MD13G1137400 Malus domestica HOM05D002165 ORTHO05D001531 8.1e-06 53.5 53 47.2


User provided reference genes

Program Settings