Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.10g025330 Amaranthus hybridus HOM05D000085 ORTHO05D000274 9.9e-36 152.9 77 100.0
EL10Ac8g18484 Beta vulgaris HOM05D000085 ORTHO05D010570 7.9e-09 63.5 35 88.6
Hund26209 Selenicereus undatus HOM05D000085 ORTHO05D000274 7.9e-09 63.5 35 88.6
AUR62010984 Chenopodium quinoa HOM05D000085 ORTHO05D000274 1.4e-08 62.8 35 88.6
AUR62021493 Chenopodium quinoa HOM05D000085 ORTHO05D000274 1.4e-08 62.8 35 88.6
Prupe.7G232200 Prunus persica HOM05D000085 ORTHO05D000274 5.1e-08 60.8 35 82.9
Atru.chr7.1360 Acer truncatum HOM05D000085 ORTHO05D000274 6.7e-08 60.5 35 80.0
Actinidia20376 Actinidia chinensis HOM05D000085 ORTHO05D000274 6.7e-08 60.5 35 82.9
Cc06_g09750 Coffea canephora HOM05D000085 ORTHO05D000274 8.8e-08 60.1 35 82.9
Dinv36639 Davidia involucrata HOM05D000085 ORTHO05D000274 8.8e-08 60.1 35 82.9
Eucgr.C03822 Eucalyptus grandis HOM05D000085 ORTHO05D000274 1.1e-07 59.7 35 80.0
Lj7A652T72 Lonicera japonica HOM05D000085 ORTHO05D000274 1.5e-07 59.3 35 80.0
MD02G1045800 Malus domestica HOM05D000085 ORTHO05D000274 1.5e-07 59.3 35 80.0
Oeu000374.1 Olea europaea HOM05D000085 ORTHO05D000274 1.5e-07 59.3 35 80.0
Potri.018G081300 Populus trichocarpa HOM05D000085 ORTHO05D000274 1.5e-07 59.3 38 76.3
RcHm_v2.0_Chr2g0090291 Rosa chinensis HOM05D000085 ORTHO05D000274 1.5e-07 59.3 35 82.9
ClCG06G008590 Citrullus lanatus HOM05D000085 ORTHO05D000274 2.0e-07 58.9 35 82.9
MD15G1184000 Malus domestica HOM05D000085 ORTHO05D000274 2.0e-07 58.9 35 80.0
Nitab4.5_0010729g0010 Nicotiana tabacum HOM05D000085 ORTHO05D000274 2.0e-07 58.9 35 80.0
Peaxi162Scf00031g02716 Petunia axillaris HOM05D000085 ORTHO05D000274 2.0e-07 58.9 35 80.0
PGR102G1360 Punica granatum HOM05D000085 ORTHO05D000274 2.0e-07 58.9 35 77.1
Actinidia09424 Actinidia chinensis HOM05D000085 ORTHO05D000274 2.6e-07 58.5 35 80.0
CiPaw.04G163300 Carya illinoinensis HOM05D000085 ORTHO05D000274 2.6e-07 58.5 35 77.1
Ciclev10007670m.g Citrus clementina HOM05D000085 ORTHO05D000274 2.6e-07 58.5 35 77.1
MSTRG.26357 Avicennia marina HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
MELO3C025348.2 Cucumis melo HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 82.9
Migut.K00512 Erythranthe guttata HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
FvH4_1g04680 Fragaria vesca HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
FAN19G0338 Fragaria x ananassa HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
FAN23G0573 Fragaria x ananassa HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
FAN26G1969 Fragaria x ananassa HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
Nn8g39156 Nelumbo nucifera HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 77.1
Nitab4.5_0000054g0240 Nicotiana tabacum HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
Nitab4.5_0007401g0050 Nicotiana tabacum HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
Peaxi162Scf00231g00029 Petunia axillaris HOM05D000085 ORTHO05D000274 3.3e-07 58.2 35 80.0
SEGI_32575 Sequoiadendron giganteum HOM05D000085 ORTHO05D000274 3.3e-07 58.2 37 70.3
Aqoxy7G01643 Aquilegia oxysepala HOM05D000085 ORTHO05D000274 4.4e-07 57.8 35 77.1
CANSAT56G3675 Cannabis sativa HOM05D000085 ORTHO05D000274 4.4e-07 57.8 35 74.3
Dinv41610 Davidia involucrata HOM05D000085 ORTHO05D000274 4.4e-07 57.8 35 80.0
Thecc.09G109300 Theobroma cacao HOM05D000085 ORTHO05D000274 4.4e-07 57.8 35 74.3
TWI63G1014 Tripterygium wilfordii HOM05D000085 ORTHO05D000274 4.4e-07 57.8 35 77.1
TAR383G0598 Trochodendron aralioides HOM05D000085 ORTHO05D000274 4.4e-07 57.8 35 77.1
COL.COLO4_34870 Corchorus olitorius HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 74.3
Gohir.A05G023500 Gossypium hirsutum HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 74.3
Gohir.D05G025000 Gossypium hirsutum HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 74.3
Gohir.D05G025066 Gossypium hirsutum HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 74.3
Oeu002237.1 Olea europaea HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 77.1
PSO210G7185 Papaver somniferum HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 77.1
PSO210G7522 Papaver somniferum HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 77.1
Peaxi162Scf00546g00021 Petunia axillaris HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 77.1
QL02p085156 Quercus lobata HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 77.1
GSVIVG01015383001 Vitis vinifera HOM05D000085 ORTHO05D000274 5.7e-07 57.4 35 74.3
CSS0037582 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D000274 7.4e-07 57.0 35 77.1
CSS0049635 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D000274 7.4e-07 57.0 35 77.1
CsaV3_1G024290 Cucumis sativus L. HOM05D000085 ORTHO05D000274 7.4e-07 57.0 35 80.0
DCAR_010454 Daucus carota HOM05D000085 ORTHO05D000274 7.4e-07 57.0 35 77.1
Duzib187G0699 Durio zibethinus HOM05D000085 ORTHO05D000274 7.4e-07 57.0 35 74.3
ECA234G4763 Erigeron canadensis HOM05D000085 ORTHO05D000274 7.4e-07 57.0 35 80.0
PGR142G3170 Punica granatum HOM05D000085 ORTHO05D000274 7.4e-07 57.0 35 77.1
Sed0025933 Sechium edule HOM05D000085 ORTHO05D000274 7.4e-07 57.0 35 80.0
MELO3C004558.2 Cucumis melo HOM05D000085 ORTHO05D000274 9.7e-07 56.6 35 74.3
CsaV3_2G002240 Cucumis sativus L. HOM05D000085 ORTHO05D000274 9.7e-07 56.6 35 74.3
Duzib150G1455 Durio zibethinus HOM05D000085 ORTHO05D000274 9.7e-07 56.6 35 71.4
Medtr6g088610 Medicago truncatula HOM05D000085 ORTHO05D000274 9.7e-07 56.6 35 77.1
TWI34G0842 Tripterygium wilfordii HOM05D000085 ORTHO05D000274 9.7e-07 56.6 35 74.3
Cpa.g.sc23.99 Carica papaya HOM05D000085 ORTHO05D000274 1.3e-06 56.2 35 74.3
ClCG11G002450 Citrullus lanatus HOM05D000085 ORTHO05D000274 1.3e-06 56.2 35 71.4
Gorai.009G025100 Gossypium raimondii HOM05D000085 ORTHO05D000274 1.3e-06 56.2 35 71.4
TAR626G1289 Trochodendron aralioides HOM05D000085 ORTHO05D000274 1.3e-06 56.2 35 71.4
Zm00001eb284700 Zea mays HOM05D000085 ORTHO05D000274 1.7e-06 55.8 35 74.3
Manes.16G115300 Manihot esculenta HOM05D000085 ORTHO05D000274 2.2e-06 55.5 35 82.9
Rhsim01G0096100 Rhododendron simsii HOM05D000085 ORTHO05D000274 2.2e-06 55.5 35 80.0
Rhsim01G0096800 Rhododendron simsii HOM05D000085 ORTHO05D000274 2.2e-06 55.5 35 80.0
Lj2g0021081 Lotus japonicus HOM05D000085 ORTHO05D000274 2.8e-06 55.1 35 77.1
Lalb_Chr14g0371551 Lupinus albus HOM05D000085 ORTHO05D000274 2.8e-06 55.1 35 74.3
Nitab4.5_0002904g0070 Nicotiana tabacum HOM05D000085 ORTHO05D000274 2.8e-06 55.1 38 71.1
TPR.G10039 Trifolium pratense HOM05D000085 ORTHO05D000274 2.8e-06 55.1 35 77.1
Zm00001eb350460 Zea mays HOM05D000085 ORTHO05D000274 2.8e-06 55.1 35 74.3
CAN.G1529.7 Capsicum annuum HOM05D000085 ORTHO05D000274 3.7e-06 54.7 35 74.3
Os05g0218400 Oryza sativa ssp. japonica HOM05D000085 ORTHO05D000274 3.7e-06 54.7 35 71.4
Sed0016371 Sechium edule HOM05D000085 ORTHO05D000274 3.7e-06 54.7 35 71.4
Solyc12g007110.2 Solanum lycopersicum HOM05D000085 ORTHO05D000274 3.7e-06 54.7 35 74.3
Sopen12g003090 Solanum pennellii HOM05D000085 ORTHO05D000274 3.7e-06 54.7 35 74.3
PGSC0003DMG400000379 Solanum tuberosum HOM05D000085 ORTHO05D000274 3.7e-06 54.7 35 74.3
CSS0039422 Camellia sinensis var. sinensis HOM05D000085 ORTHO05D000274 4.8e-06 54.3 36 77.8
Ca_20225_v3 Cicer arietinum L. HOM05D000085 ORTHO05D000274 4.8e-06 54.3 35 74.3
Glyma.07G085600 Glycine max HOM05D000085 ORTHO05D000274 4.8e-06 54.3 35 74.3
Glyma.09G191300 Glycine max HOM05D000085 ORTHO05D000274 4.8e-06 54.3 35 74.3
Gohir.A06G063100 Gossypium hirsutum HOM05D000085 ORTHO05D000274 4.8e-06 54.3 35 71.4
TAR624G0178 Trochodendron aralioides HOM05D000085 ORTHO05D000274 4.8e-06 54.3 34 73.5
Phvul.004G164000 Phaseolus vulgaris HOM05D000085 ORTHO05D000274 6.3e-06 53.9 35 71.4
Gohir.A07G005900 Gossypium hirsutum HOM05D000085 ORTHO05D000274 8.2e-06 53.5 36 75.0
Gohir.D07G006100 Gossypium hirsutum HOM05D000085 ORTHO05D000274 8.2e-06 53.5 36 75.0
Gorai.001G005700 Gossypium raimondii HOM05D000085 ORTHO05D000274 8.2e-06 53.5 36 75.0
Nitab4.5_0009314g0050 Nicotiana tabacum HOM05D000085 ORTHO05D000274 8.2e-06 53.5 35 74.3


User provided reference genes

Program Settings